XLOC_017579.5 (mRNA) -

Overview
NameXLOC_017579.5
Unique NameXLOC_017579.5
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000202_pilon:424655..425347-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_017579.5 ID=XLOC_017579.5|Name=XLOC_017579.5|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=693bp|location=Sequence derived from alignment at sc0000202_pilon:424655..425347- (Clytia hemisphaerica_ch_hm2_pilon)
GCTGACTGGAACAAATACATAAAAGCTGCAAAGAAAGCAAGATTGACTTG
TAAACAAACTTGTGATAAATTTATCAACGACAATTTTTTATCAGAACACA
AATCAAATCCGAAAAAGTTCTACAGTTACATCAAATCGAAAAAGCAGGAT
AATATCGGAATCACTTCTTTGCTCTCAAATGGAAATACTTTTACTGATGA
CACTCAAATTGCAAAAATCCTCAATAATCAATTCCTGAGTGTTTTTTCAG
AAGATGACGGCCGAACACCAGATATAAAAGGAAATACCTGTCCACCCATC
AGTGAATTAGAAATAACACAAATGGTGTTCAAAAATTACTTTCAGAGCTC
AACCCCAGCAAAGCTAATGGACCAGATCAAATTTCCACCAGAATTTTGAA
GGAGTGTGCTGATATAATAAGTAAACCCCTTACTCTCATCTTTCAAGCTT
CGCTGAAGCAATCAAAAATTCCAGATGACTGGCGCAAAGCAACCATTACT
CCGCTATATAAAGGCAACAACAAAAGCAGATCAAACCCTGAAAGCTACCG
CCCTGTGAGCCTAACATCTGTACTATGTAAAACACTCGAACACATAATTC
ACAGTCACATAATCAACCATTTAGAGCAGCAAAACATCCTCACTGACCGA
CAACATGGATTTAGAAAGAAACGATCCTGTGAGACACAATTAG

Coding sequence (CDS) from alignment at sc0000202_pilon:424655..425347-

>XLOC_017579.5 ID=XLOC_017579.5|Name=XLOC_017579.5|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=654bp|location=Sequence derived from alignment at sc0000202_pilon:424655..425347- (Clytia hemisphaerica_ch_hm2_pilon)
GCTGACTGGAACAAATACATAAAAGCTGCAAAGAAAGCAAGATTGACTTG
TAAACAAACTTGTGATAAATTTATCAACGACAATTTTTTATCAGAACACA
AATCAAATCCGAAAAAGTTCTACAGTTACATCAAATCGAAAAAGCAGGAT
AATATCGGAATCACTTCTTTGCTCTCAAATGGAAATACTTTTACTGATGA
CACTCAAATTGCAAAAATCCTCAATAATCAATTCCTGAGTGTTTTTTCAG
AAGATGACGCTGACTGGAACAAATACATAAAAGCTGCAAAGAAAGCAAGA
TTGACTTGTAAACAAACTTGTGATAAATTTATCAACGACAATTTTTTATC
AGAACACAAATCAAATCCGAAAAAGTTCTACAGTTACATCAAATCGAAAA
AGCAGGATAATATCGGAATCACTTCTTTGCTCTCAAATGGAAATACTTTT
ACTGATGACACTCAAATTGCAAAAATCCTCAATAATCAATTCCTGAGTGT
TTTTTCAGAAGATGACAGCAGCAAAACATCCTCACTGACCGACAACATGG
ATTTAGAAAGAAACGATCCTGTGAGACACAATTAGAGCAGCAAAACATCC
TCACTGACCGACAACATGGATTTAGAAAGAAACGATCCTGTGAGACACAA
TTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_017579.5XLOC_017579.5-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000202_pilongenomesc0000202_pilon:424655..425347 -
Properties
Property NameValue
Aaloc259-327:70
Aaloc1-258:694