XLOC_017535 (mRNA) -

Overview
NameXLOC_017535
Unique NameXLOC_017535
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000300_pilon:59657..60688-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_017535 ID=XLOC_017535|Name=XLOC_017535|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1032bp|location=Sequence derived from alignment at sc0000300_pilon:59657..60688- (Clytia hemisphaerica_ch_hm2_pilon)
AGAATTGAGATGCTGCCCAAAAGAAATCACAAATACTTGTTGTTGGTAGC TATTGCTCTATGTACGATGTTAGTTATAAATATGTTTGAATTATTTGGTA ACAACTCTGGAACCTCACCATTGAACGAATATGTGCAATTGTATAATGGT TCATATTACAGAAAATCAAGCGAAACGTTCCACGATAAATACAATCTTTT ACGGAATAGCTCACAAGTACCTTTCCAAGTTTGCAACACTTTTAAATATT CTCCAGCAGATTGGACATTATATGAATTGCAAAAATATGAATATACACTT GAAAATAAAACTTGTAATGATTTATATAGAAGTTTGTTTAGAAATGAAGT TTTAATTTACATGAAGACAGAAAAACGACCTCAAAAACGCGTCAAATGGA TTGTCCATACAGACGGCTCAATCACTTCTTTAGGATGTACAAAACATACT CATGATTGCGAGCCTGGGTCATTTTATGATTACGAACGTCAGATGAGAAT CGATACACCTCCGTGTTGTCGGCATAAAATAATGGAAATTTTGGAAAGAG TTAGTAATCATTTAAATGAATATAATGTCTCTTATATGGTTGTTGGTGGA TTTGTGATCAGTTATGTTCGTTCCAAAGAAATTTTACACTCTGATGAAGA TGTTGATATGTTTATTGATACACATCACTGGCAGACTGATATATTCCGTA ATAAAATGAATGAATTGACTAAAGAATTTGGTTATTATCAAAATTGGAGA ATGTCTGATAAGAAATCGATGGCTGTTAAGTATAGTAAACTAAATTGGAA TGGTTTGGGTATGTGGGATTATACGATAGATTCTAAAAAGATATTCCGAG TTGTAACTCACGCACCGAGTTATAAGGCAGATACAATGGTTCCACCATTT TTAGTTTCAATGAATAATGTGGTTACGAAAATGCCACATAAACCAGAAGC ATATTTGGATAAAACTTATGGACCAGGAAGATGGGAACATGAATTAGATT GCAAGAAAAAAGACAGGAAGAAATGCGCTTAA

Coding sequence (CDS) from alignment at sc0000300_pilon:59657..60688-

>XLOC_017535 ID=XLOC_017535|Name=XLOC_017535|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2064bp|location=Sequence derived from alignment at sc0000300_pilon:59657..60688- (Clytia hemisphaerica_ch_hm2_pilon)
AGAATTGAGATGCTGCCCAAAAGAAATCACAAATACTTGTTGTTGGTAGC
TATTGCTCTATGTACGATGTTAGTTATAAATATGTTTGAATTATTTGGTA
ACAACTCTGGAACCTCACCATTGAACGAATATGTGCAATTGTATAATGGT
TCATATTACAGAAAATCAAGCGAAACGTTCCACGATAAATACAATCTTTT
ACGGAATAGCTCACAAGTACCTTTCCAAGTTTGCAACACTTTTAAATATT
CTCCAGCAGATTGGACATTATATGAATTGCAAAAATATGAATATACACTT
GAAAATAAAACTTGTAATGATTTATATAGAAGTTTGTTTAGAAATGAAGT
TTTAATTTACATGAAGACAGAAAAACGACCTCAAAAACGCGTCAAATGGA
TTGTCCATACAGACGGCTCAATCACTTCTTTAGGATGTACAAAACATACT
CATGATTGCGAGCCTGGGTCATTTTATGATTACGAACGTCAGATGAGAAT
CGATACACCTCCGTGTTGTCGGCATAAAATAATGGAAATTTTGGAAAGAG
TTAGTAATCATTTAAATGAATATAATGTCTCTTATATGGTTGTTGGTGGA
TTTGTGATCAGTTATGTTCGTTCCAAAGAAATTTTACACTCTGATGAAGA
TGTTGATATGTTTATTGATACACATCACTGGCAGACTGATATATTCCGTA
ATAAAATGAATGAATTGACTAAAGAATTTGGTTATTATCAAAATTGGAGA
ATGTCTGATAAGAAATCGATGGCTGTTAAGTATAGTAAACTAAATTGGAA
TGGTTTGGGTATGTGGGATTATACGATAGATTCTAAAAAGATATTCCGAG
TTGTAACTCACGCACCGAGTTATAAGGCAGATACAATGGTTCCACCATTT
TTAGTTTCAATGAATAATGTGGTTACGAAAATGCCACATAAACCAGAAGC
ATATTTGGATAAAACTTATGGACCAGGAAGATGGGAACATGAATTAGATT
GCAAGAAAAAAGACAGGAAGAAATGCGCTTAAAGAATTGAGATGCTGCCC
AAAAGAAATCACAAATACTTGTTGTTGGTAGCTATTGCTCTATGTACGAT
GTTAGTTATAAATATGTTTGAATTATTTGGTAACAACTCTGGAACCTCAC
CATTGAACGAATATGTGCAATTGTATAATGGTTCATATTACAGAAAATCA
AGCGAAACGTTCCACGATAAATACAATCTTTTACGGAATAGCTCACAAGT
ACCTTTCCAAGTTTGCAACACTTTTAAATATTCTCCAGCAGATTGGACAT
TATATGAATTGCAAAAATATGAATATACACTTGAAAATAAAACTTGTAAT
GATTTATATAGAAGTTTGTTTAGAAATGAAGTTTTAATTTACATGAAGAC
AGAAAAACGACCTCAAAAACGCGTCAAATGGATTGTCCATACAGACGGCT
CAATCACTTCTTTAGGATGTACAAAACATACTCATGATTGCGAGCCTGGG
TCATTTTATGATTACGAACGTCAGATGAGAATCGATACACCTCCGTGTTG
TCGGCATAAAATAATGGAAATTTTGGAAAGAGTTAGTAATCATTTAAATG
AATATAATGTCTCTTATATGGTTGTTGGTGGATTTGTGATCAGTTATGTT
CGTTCCAAAGAAATTTTACACTCTGATGAAGATGTTGATATGTTTATTGA
TACACATCACTGGCAGACTGATATATTCCGTAATAAAATGAATGAATTGA
CTAAAGAATTTGGTTATTATCAAAATTGGAGAATGTCTGATAAGAAATCG
ATGGCTGTTAAGTATAGTAAACTAAATTGGAATGGTTTGGGTATGTGGGA
TTATACGATAGATTCTAAAAAGATATTCCGAGTTGTAACTCACGCACCGA
GTTATAAGGCAGATACAATGGTTCCACCATTTTTAGTTTCAATGAATAAT
GTGGTTACGAAAATGCCACATAAACCAGAAGCATATTTGGATAAAACTTA
TGGACCAGGAAGATGGGAACATGAATTAGATTGCAAGAAAAAAGACAGGA
AGAAATGCGCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_017535XLOC_017535-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000300_pilongenomesc0000300_pilon:59657..60688 -
Properties
Property NameValue
Aaloc1-1032:1033