|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000300_pilon:121247..126371- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_017529 ID=XLOC_017529|Name=XLOC_017529|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5125bp|location=Sequence derived from alignment at sc0000300_pilon:121247..126371- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGGAATTGTTTATGGAAAATCAGAACAAGTGACAATTCAAGCTCTAG
TATGATGAGCCACAAAGAAATCTTCTAAGAGAAAGCTCTAGCATGGAGTT
CGTAAGAGGAGGAGAGAGAAATTCTCATCAATCAAACAATGATGGACCAA
ACAACCATAGTGTCAGTGCTGATGAGAGTGATGATTCTTTTGTGAGTATT
TGTACTCTTTACTTTTATACATTGGGGGATGCACACTTGTCACCTGCTCA
TTACCGTAAGTTGGCCTAATGTCGACATCCGTCTTCTAATTTCGACACCC
TTCTTTAAAGATAGTAACAATAGAAACTGAGGAAAGTCGGAATCGCTGAT
TGACTTTGATTAGCACGATGAGAGGAAAAATCTTTTGTCTACCAGTGATT
TCGACCTTCTTATTATTCCTATCTATAAAGAAGGATGTCGAAATTAGGAG
ACGGATGTCGACATTAGACCAACTGACGGTACTCGCTAATAATTTGTTCA
TTATATTGGGACGGTGTGAGGTTTGGGGACTGTTGTCTATAATTCTTTTT
GGGCCATCCCAGAAAATTTTTGTTACCCCCCGTCGGACGACGCGCATTCT
TAAATTTTTTCTAGCCTCGGAAATAATTTTTCTTTTCCAGTTGCGGAAAT
TCCAATGAAAATCCATGTACTTTTGCAAAATGCATCGGAAATTCCATTCT
TTTTTGCCTATTTTAATTCAATTGTCTTGGAAACTCATACATTTTCTTCT
CTTGCCTTGGAAATTTCGAATTTTGGTGAAAACTTTTACCCTTGGAAATC
CTGTGTCGTCCGCCCCCTGTTACAGACAAATTCTGGAATGGCCCTTTGGA
CCTACCCCGGTGGGGTGGAGGTCCTATAAATTAACCTTTGTCCGTTCGTC
CGTTCGTTATAGGCCCGTTTCATGTGACGTCACATGTTATATATCGGCTC
GTTACGACCCGCAAAACGGCCGGACTTTCAGAGGCAAAAAAGACAACAAC
ATTAGTTGGAGGCACACAGTTTATGTCAATTTTCTCAGGATCTAGAGGGA
ATTTTGAATAGAAATTTTAGTATGTTATCTAAGGCCAATGAAATTTACAT
ATGAGTTTACCGTCGGCCGCCCGCATCTCTAAAAAGCACCCGCATGAAAA
TTTCATTATCTTCAAAATGCCTAAAATTTTCATTATTTCTATATTTCTTT
ACAACTACAACTCCTAAAATCGTCTCTACGCAGGATCCCTCTACGCATGA
CCTTTTTCCCCAGAGTGTAAAACAAAGAAGATTTTTACAGAAAATTGACC
GCCCTAATCCTACAACTACAGCGGGCGTCACACCCCATCTATCTGCCTAA
CCGCCCTGCGGCCATTTTAGTTTTTTGCCAATCTAGCGCCATTAGCAATC
ATCTTTATTTTCGTTCGAAACATGTAGGGTTGACGAAGCAAAATTTTTTA
TTTTGAGAGAGAATGGTTAGCAAAATGGTGGATAAGGGCTGTTGGAAAAT
AATGATAATGAATAATGAAATCATGCCGCATCTATTTTTGGGTAAGTTCA
CGACGGTAAACTCATATGTAAATTTCATCAGCCTAATAACTATATAGGAT
TCTTATACTAAAATTTCATGAAATTCTGATGAAGAGATTTTGAATAATAA
AATCAAAACTGCCTTTTTCCAGCAAGCGCTTCGTGTTTTCTGCCTCTGAA
AAACCTTAACTATTTTGGGCGCATGCGCACACAAACGCGAAAAATCAAAA
CATTGAAACGGGTCTATTAGCTTTCCTCGTGATTGGCTCATTAGTCTTTT
CTGATTTTTTGCACAAAGATGTGTAACTATAAACCCTCGCATGTGACGGA
GCCCGATTTTCGAAGAAAACAAATTTTAGGGCAAATTTGGGCCAAAAAAC
GGCTAAAAAACGCATGTTTATCTATAAGAAACACTATTAATAAGCATACA
TTAATGTTCTTAGTTAAATTACTCAATTGTTTTATGAGATAGATGTTTTT
TTGCTCACGAGGGCTTACTTTTGAAGAATGTGTGTGTTTGGACATGAAAT
TTTGGTTTCTTGGCATGTTTTTATAGAAAAACTGGCCAAATTCGATATTT
ATTTATAAGCACATTATCAATTACCTAGGTATTAGCTTTTCTCAAGATTG
CCTCTTTCATTCTTTATGATCTTTTGCAAAAAGATGCATAACTATAAACG
CGCGAATGTGACAGAGGCTCCCAGCCAGCACACAACGTTTTTTTAGGTTT
AAATTACATTGTGAAGAAACGCGTTGCCAAAAAACGTTTTGTACGTTTTG
TACCTCTATTATTCTGAATCCGTTGCTCGTGTTTAAAACGTTAACAATTT
TGTAATAAAAAATTATGTTTGGTATAAGAAGCAATTGATGTTTTGTTTAA
ATTGGTCCAGTGTATCAAATCTCTCAGTTTAGTTGACACTTGGACTTCTT
CATAGCGTCACAGGGAAAGGTTTGTTTTTATTTTAGTTTGTATCTTTGAA
AGACCCCATCGGATTTAGGCAGGGGAGTCGGATTTAGGACCACTCACGGT
AGCAAGCATGACAAGAATTTTTATTGTTAGGAAAAAATTCTGTAAAACGC
ACTTTTTATGGAGGGCCATTTTTCAGCTGACTTTAATTTTAACGCTTTCG
AGACAAGACAAAAAGTTTTGTGAAAATGGGGAAAAATTTGCCAAAGTAAA
CTATTTTAATCTCCATGAAATTTTAGATCTAATTAGGAGTCAGATTTTAC
TTGAAAAAATTGGAATATTTTCTGACTTGGAGCTCTCCCGCATTTTTGTG
AGGCAAAGTGCAAAGCGCATGCATAATTTATTGTTCTTTAAACCGTCAGT
GGTTAAACTGCGTAAAGTTCAAATCCCTGAATGAAATCCCTGGGGTGGTG
TCACTTCTATGGCCAGGGGTTGAGATGGCTAATATTGTTGTTCTTGGTTG
TTTTGTATTCAATTTTTTTGATTTTGCAAATTTGGTCCTTTATTCCCCTC
TGAAAGTCAACAGTCGATTCGCCAATTTCAAAAAAAATTTCTATCAAAGG
GTATCATACCCCAAGGGTCCCATAAAACCAGAAAAGAAAAATAATTTAAA
AAATAAGTAAACAAATTTCAAAGAAGAGTGAATTTAAAATTAGGAAGAGA
TTAGCATACCTACAACTTCTTCTGAAAGTTCTAATTTCACAAAAGGAGTT
ATGTGGAGGTGTCATATAGTCAAAGTATTGTATAAATATGACAATTTCCA
TCATTTTAGTTCTCAGGAATCTTTAGAGCTTTCAGTGTGTTACATTGAGA
AAAATCCACATCTGTTATCAGGTTAGCTAGGCTAGTGGGACATTTAGTTT
TTGATGTCTCATGATTGAAATAATATCCTAGAGTACTTGTTTGAAAAATA
AATAGAAATTGGATGTGATTACTTAATAAATTTGTGATCTACTATTTCTT
TAATAATGTGGTTTTGAAGTTGAAATTCACGTTAAAGAAAGCGTAACAAA
CAAGTGCCAAAAAATATGTTATACCCCTTATTAAATTAAGAATTTTTAAA
GATTAAAGATTTCAATATTTCATACTTTCAAAAACTTACAATTTTAATGA
AAACTGGTTATATTTTAAAAGGAAATGTCTATCAAAGGTATATTCGATAA
TCATTGATGTTGTAAAGCTTGATTTAAAAACCAAGTCAATTTATATAAAG
CACATTTCTAATTAATTGTATGCATTGACACCCCTATGTTTTTTACACTT
TTTAAAAAGTTAACTCTAAAACTAGCGAGCTATATTTAGAAAATAGTAGT
TCAATTATTTTTCAAATTAGGATATCTGTTTTCTAACTATAAAAACTTCA
GGAGTTAAAAGACATTTTTTTGGTTTCAAGACATAAAAAGCTGTCTAAAG
TATTTTGGGTCACCCGGCTTGTTATCTGAAGAGATGGAATCCAAATTAAC
TAAAACCCCTACAAGCGCAGTATTGTGATGAACAATGGAAAACTCTACTT
TTTGGTGTGGCCAAGTTTCAAAAAAGTGGCCAATCACAAAATATGTCTTT
TAAATAATCCTGTATACAGGTCTTATCTTAAAATTAGAGGTTCCTGAATA
AGGCTTGAAACTTCTTACAATTTGTTTGACTAAAAGAATACTAGGGACAG
AAACTCTTGATCAGTTATAAGGAATTTGAAATATGTGAATTCAATCATTG
TTTCTAGGAAAATACCATATTCAACATTGGGGACGAGTCATCAAGCAGCA
CACATCATGCTTCTTCATCTGAGGGTTATCTCTCTGAAGAACAACAAATC
AAGATGGCGCAACGAATTGGTTTAATCAATCATCTACCTTTGGGTACATT
TGATGGAATGAAAAAGAAAAGAGAGTGAGTATATCCATTATCAAATCTTT
TCTTTTAACAAAGTAAATTATCATTATCGTCATCATCATCATCATTATCA
TATTTTGACTTACAGTACATTAGAAAATTTAAATAGCCACTAAACCAGAT
CATGCATGAGATGACCCTTTTTCATTTCCTCAATCTTTAAAGTTTCAGGC
AAAGTTAACTTCCTTGATCTTATTTGGCCAGGAGGTGACCAGAAAAGGAA
TTTCAACTAGATTAAAACTGTTTAAGACACATGCTGCAAGTCAAAAACAT
TATTCAAATTCTTAAAAAACGTATGACTCAATGATAGGGGATAGCATAGA
AATCCTAATGAGGATGAATGATGAAGAATGCTGTAGGGAGGATTTTGGTA
ATGGTGTCTTAGAATATTGAAAAACACTTAAAAGACTTCTTATAGACATT
TCTTGAATAGACGATATCAGCTTAACGTGAAAACTCAGATTTGATCCCCG
AAAATTGCCCACAATGCTTTGCACGGAAAAAAGTTCATGGTGAAAATTTT
TTCGGCACAAAGCATTGTGGGGAATTCTCTACTGTTTCTTCTTTTTTCAG
ATGTGTAATATGTATGATGGATTTTGATGTTGGTGATAAAGTTCGCTATT
TGCCTTGTCTTCACATTTACCATCAGGAATGTATTGATGATTGGTTGATG
CGATCATTTACTTGTCCATCATGTGTTGAACCCGTTGATGCAGCTCTGAT
TTCCACTTTTTACACATCAGAATAA Coding sequence (CDS) from alignment at sc0000300_pilon:121247..126371- >XLOC_017529 ID=XLOC_017529|Name=XLOC_017529|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1066bp|location=Sequence derived from alignment at sc0000300_pilon:121247..126371- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGGAATTGTTTATGGAAAATCAGAACAAGTGACAATTCAAGCTCTAG
TATGATGAGCCACAAAGAAATCTTCTAAGAGAAAGCTCTAGCATGGAGTT
CGTAAGAGGAGGAGAGAGAAATTCTCATCAATCAAACAATGATGGACCAA
ACAACCATAGTGTCAGTGCTGATGAGAGTGATGATTCTTTTATGGGGAAT
TGTTTATGGAAAATCAGAACAAGTGACAATTCAAGCTCTAGTATGATGAG
CCACAAAGAAATCTTCTAAGAGAAAGCTCTAGCATGGAGTTCGTAAGAGG
AGGAGAGAGAAATTCTCATCAATCAAACAATGATGGACCAAACAACCATA
GTGTCAGTGCTGATGAGAGTGATGATTCTTTTGAAAATACCATATTCAAC
ATTGGGGACGAGTCATCAAGCAGCACACATCATGCTTCTTCATCTGAGGG
TTATCTCTCTGAAGAACAACAAATCAAGATGGCGCAACGAATTGGTTTAA
TCAATCATCTACCTTTGGGTACATTTGATGGAATGAAAAAGAAAAGAGAG
AAAATACCATATTCAACATTGGGGACGAGTCATCAAGCAGCACACATCAT
GCTTCTTCATCTGAGGGTTATCTCTCTGAAGAACAACAAATCAAGATGGC
GCAACGAATTGGTTTAATCAATCATCTACCTTTGGGTACATTTGATGGAA
TGAAAAAGAAAAGAGAATGTGTAATATGTATGATGGATTTTGATGTTGGT
GATAAAGTTCGCTATTTGCCTTGTCTTCACATTTACCATCAGGAATGTAT
TGATGATTGGTTGATGCGATCATTTACTTGTCCATCATGTGTTGAACCCG
TTGATGCAGCTCTGATTTCCACTTTTTACACATCAGAATAAATGTGTAAT
ATGTATGATGGATTTTGATGTTGGTGATAAAGTTCGCTATTTGCCTTGTC
TTCACATTTACCATCAGGAATGTATTGATGATTGGTTGATGCGATCATTT
ACTTGTCCATCATGTGTTGAACCCGTTGATGCAGCTCTGATTTCCACTTT
TTACACATCAGAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000300_pilon | genome | sc0000300_pilon:121247..126371 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 358-531:175 |
| Aaloc | 190-354:919 |
| Aaloc | 52-189:5073 |
| Aaloc | 1-51:5126 |
|
