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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000309_pilon:225448..227783+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_017494 ID=XLOC_017494|Name=XLOC_017494|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2336bp|location=Sequence derived from alignment at sc0000309_pilon:225448..227783+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAATCTGCTGAAAAGGTGTGTCAATTGTTAGAGATCAGTCGTCGATC
CAGATTTCTTAATATCTTTAGTTTGAGAGGTCTTCAGGCTTCTCGTTATT
CAGAATTATCTCACCTAACATTGGTATCCTGATTTGAAAGCTCAGAGGTG
CTGACGCCTCATTCAATTTTAGATTTGAGGAGAAATTATAGCATCCCAAC
AATGCCTTTTTACTTTAAGGTCAACGGGATCAAAGGACCATCAGCTCTTC
TTGCATTACCAGTATTTAGCATCACAGATGAAGTAGTTCCTGATTATATG
CATGGTATTCTTCTTGGTGTTGTCAAATCTTTGCTAGCATTTTGGTTTGA
CCCAGCTGAACATAAGAAGTACTATCAAAGCTTCAAATGTTATCCAGACT
ATTTCATTGGGTATAtggtgagaaaaaaaattatattatgtCAATCAATT
TAAAGCAAAACTATTCACCTTTTCAATTGCCAATAATCCAATCTATAATT
TGGAACATTTATTTCAGGTCAATGAGGCCGATCAAATATGAAACCAGTTG
ATAATATTTCAAGGAGACCCCGGCCAATATCTGGGAACATTGCTCATTTT
AAAGGTAACTTCTTTTTACCTCAGTAAAGTAACAATGAGTTTACAATAGG
TCAGGGATTTGTAGTCAACATGTTTATTGCTTGATTCTTTATTTTAGCAA
ACGAATTGAGAACCTGGCTCCTTTACTACGCCCTTCCgtctttgaaagaa
attttgccTTCCCTTTATTGGAAGCATTTTGCGCTTCTTGTAGAAGCAGC
CCACATAACTCTATCTTCACGTATCACAACTGATGATCTCGATTGGGCCA
GAGAATGTCTTGATCTCTTCTACAAACACTTTTGTGCATTTtatggtaag
ttttttttttcaagagggaATAATTCCCGGGATTGGTTATATGTTCTAAT
TCATTCTTTATGCTCTAGAAGGAAAAATTACTCCCTGAAACGCATTTAAA
ATCACATTAAGCTTggtaaaaatgcttttttctttAACAGAGGATCGTAA
GTCTGGATTGAATGTTCACAACCTGCATCATATCCCAATCTTTGTAGAAT
ACTGGGGACCGTTATGGGCATGGTCTTGCTTTGGTTTTTGAAAGCTTAAA
TGGTGGAGTTATTAAAAAAGTTCATGGAACAAGGAACAGTTGTTTACAGG
TGATGATTCATACTTTTTAAGTCAGCCCAAATAGTTTTAGGATGATTAGT
GGAACAAAATAATGTAAAAGTATTTTattcataattatattttttacaaa
cctATAAGTTACCAATGTTCATAACATTATCATTAAAAAGACTAATGCTC
GCTCCTTTCTGttattttaaaatctatttttgatTTAGATTTTCAAAGCT
TTCAATGCCTTAAAGACAGTTCATACCCTGATGTATGCAAAAAGTACAAA
ACCAATCTTGAAAGAGACGTTGAAATCTATTTTGATAAACTATAGAAGGT
ATAttaattttcagtattttaaaaAGATGGATGCTTACTTGAGAAATTAG
TTGAAGTGTACTTAATCTTTTTGGAGTAATTTTTGCTTGATTATCTTGGA
ATATTTAGCTTAGTAgtatttttcatcattattaCAATGTCATTAAATCA
TTATTTCAGGAGCACAAGATCTTGGTTGAAAGTCAGAGAAGACTGTTTTC
TTGGCGGCAAAGGGCTTAAACTCAAACATAGAGACTTTTTAGAAGATGCG
ATGAAATTTCTTCAGCTTAAATTCCAGGGGACGTACTATTCATCACTCGA
GTACGCTCGAGCTGCAAAAACTGTCAATTATGTTGCCATGATCAATTTGA
ACGGAAGACTTTGTGTTGCCAagataaattatttcattttcgaCAGAGAG
GAAGTTTTATATTCTGGAAATGAATTAAAACTGAAAGATGACTGGACCAT
ACTCGCAGAATGGAAAAGCAGTAGATTGATGCGTGTAGATACTCTAAAAA
AGTAATCTCTTAAGTTATTTTAAACTCGATGAATATCTAGCTAACCTTAC
ATTTCTAGTAAAGAGTAGTCTGAGGTCGTGTCATAACGTCAAACTCCTGT
TAGTTTGTGATTTATTGTGGATTTCTTTCTAGTTCAGCACATGaccaatt
ttttatcattttctaaatttgagAATTATCAATCCAATGGGGTGTGGTAG
ACGTAAATTCTCCATTCACttattgttttctattttcagaTCTCTTGATT
TCATTGCCAGCGTTGATACAATCGTTGAGAAACTGTTCTTTATTGATGGA
AATGAAAATTGTGTCTGTGTGTGTAAGATTCCATCC Coding sequence (CDS) from alignment at sc0000309_pilon:225448..227783+ >XLOC_017494 ID=XLOC_017494|Name=XLOC_017494|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2444bp|location=Sequence derived from alignment at sc0000309_pilon:225448..227783+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAATCTGCTGAAAAGATGGAATCTGCTGAAAAGGTCAACGGGATCAA
AGGACCATCAGCTCTTCTTGCATTACCAGTATTTAGCATCACAGATGAAG
TAGTTCCTGATTATATGCATGGTATTCTTCTTGGTGTTGTCAAATCTTTG
CTAGCATTTTGGTTTGACCCAGCTGAACATAAGAAGTACTATCAAAGCTT
CAAATGTTATCCAGACTATTTCATTGGGTATAtggtgagaaaaaaaaGTC
AACGGGATCAAAGGACCATCAGCTCTTCTTGCATTACCAGTATTTAGCAT
CACAGATGAAGTAGTTCCTGATTATATGCATGGTATTCTTCTTGGTGTTG
TCAAATCTTTGCTAGCATTTTGGTTTGACCCAGCTGAACATAAGAAGTAC
TATCAAAGCTTCAAATGTTATCCAGACTATTTCATTGGGTATAtggtgag
aaaaaaaaGTCAATGAGGCCGATCAAATATGAAACCAGTTGATAATATTT
CAAGGAGACCCCGGCCAATATCTGGGAACATTGCTCATTTTAAAGGTCAA
TGAGGCCGATCAAATATGAAACCAGTTGATAATATTTCAAGGAGACCCCG
GCCAATATCTGGGAACATTGCTCATTTTAAAGCAAACGAATTGAGAACCT
GGCTCCTTTACTACGCCCTTCCgtctttgaaagaaattttgccTTCCCTT
TATTGGAAGCATTTTGCGCTTCTTGTAGAAGCAGCCCACATAACTCTATC
TTCACGTATCACAACTGATGATCTCGATTGGGCCAGAGAATGTCTTGATC
TCTTCTACAAACACTTTTGTGCATTTtatgCAAACGAATTGAGAACCTGG
CTCCTTTACTACGCCCTTCCgtctttgaaagaaattttgccTTCCCTTTA
TTGGAAGCATTTTGCGCTTCTTGTAGAAGCAGCCCACATAACTCTATCTT
CACGTATCACAACTGATGATCTCGATTGGGCCAGAGAATGTCTTGATCTC
TTCTACAAACACTTTTGTGCATTTtatgAGGATCGTAAGTCTGGATTGAA
TGTTCACAACCTGCATCATATCCCAATCTTTGTAGAATACTGGGGACCGT
TATGGGCATGGTCTTGCTTTGGTTTTTGAAAGCTTAAATGGTGGAGTTAT
TAAAAAAGTTCATGGAACAAGGAACAGTTGTTTACAGAGGATCGTAAGTC
TGGATTGAATGTTCACAACCTGCATCATATCCCAATCTTTGTAGAATACT
GGGGACCGTTATGGGCATGGTCTTGCTTTGGTTTTTGAAAGCTTAAATGG
TGGAGTTATTAAAAAAGTTCATGGAACAAGGAACAGTTGTTTACAGATTT
TCAAAGCTTTCAATGCCTTAAAGACAGTTCATACCCTGATGTATGCAAAA
AGTACAAAACCAATCTTGAAAGAGACGTTGAAATCTATTTTGATAAACTA
TAGAAGATTTTCAAAGCTTTCAATGCCTTAAAGACAGTTCATACCCTGAT
GTATGCAAAAAGTACAAAACCAATCTTGAAAGAGACGTTGAAATCTATTT
TGATAAACTATAGAAGGAGCACAAGATCTTGGTTGAAAGTCAGAGAAGAC
TGTTTTCTTGGCGGCAAAGGGCTTAAACTCAAACATAGAGACTTTTTAGA
AGATGCGATGAAATTTCTTCAGCTTAAATTCCAGGGGACGTACTATTCAT
CACTCGAGTACGCTCGAGCTGCAAAAACTGTCAATTATGTTGCCATGATC
AATTTGAACGGAAGACTTTGTGTTGCCAagataaattatttcattttcga
CAGAGAGGAAGTTTTATATTCTGGAAATGAATTAAAACTGAAAGATGACT
GGACCATACTCGCAGAATGGAAAAGCAGTAGATTGATGCGTGTAGATACT
CTAAAAAAGAGCACAAGATCTTGGTTGAAAGTCAGAGAAGACTGTTTTCT
TGGCGGCAAAGGGCTTAAACTCAAACATAGAGACTTTTTAGAAGATGCGA
TGAAATTTCTTCAGCTTAAATTCCAGGGGACGTACTATTCATCACTCGAG
TACGCTCGAGCTGCAAAAACTGTCAATTATGTTGCCATGATCAATTTGAA
CGGAAGACTTTGTGTTGCCAagataaattatttcattttcgaCAGAGAGG
AAGTTTTATATTCTGGAAATGAATTAAAACTGAAAGATGACTGGACCATA
CTCGCAGAATGGAAAAGCAGTAGATTGATGCGTGTAGATACTCTAAAAAA
aTCTCTTGATTTCATTGCCAGCGTTGATACAATCGTTGAGAAACTGTTCT
TTATTGATGGAAATGAAAATTGTGTCTGTGTGTGTAAGATTCCATCCaTC
TCTTGATTTCATTGCCAGCGTTGATACAATCGTTGAGAAACTGTTCTTTA
TTGATGGAAATGAAAATTGTGTCTGTGTGTGTAAGATTCCATCC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000309_pilon | genome | sc0000309_pilon:225448..227783 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1123-1218:2241 |
| Aaloc | 781-1119:1661 |
| Aaloc | 670-777:1389 |
| Aaloc | 607-669:1137 |
| Aaloc | 514-606:1043 |
| Aaloc | 316-510:700 |
| Aaloc | 235-312:526 |
| Aaloc | 232-234:520 |
| Aaloc | 19-228:220 |
| Aaloc | 1-18:1 |
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