|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000333_pilon:106820..110080- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_017481 ID=XLOC_017481|Name=XLOC_017481|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3261bp|location=Sequence derived from alignment at sc0000333_pilon:106820..110080- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTGGAAGAGGTAAGCCTAAAAAGAAAGAAAGAATTAGCGTATCCAA
ACGTGCAGGAACTATATTTCCTGTGTCACGTGTCAGACGCTATTTAAGAG
GATGTACACACAAACTACGCATCGCAATGGGAGCTCCAATTTATCAAGCT
GCTGTAATGGAATATTTGTCAGCGGAAATTCTTGAATTAGCTGGTAATGC
AGCACGAGACAATAAGCGTTCTCGTATCACTCCACGACACATTCTTTTGG
CTATTGCCAATGATGAAGAGCTTAACAAGGTAACTAAAAGATAAATTAAT
TTTATGTTTTCTACTTGCATCATACAAATACGTACATCAAGAGTTGAATG
AGAAACTATTGTGATGAGTTGATTTTTACTTCCTTCAGGGAACTTTTTTT
TTTTTCAGAGCTTGTTTTCTTAACATGAGAGGCGTCTTTGGAAAAACTTA
TTTTGATGTTTTACTAACAAAGTTCTGATGTATCTTGATATCGTATTTAA
TATATCTCATACAGCTTTTGAAAAACGTCACAATTGCATCTGGAGGTGTC
ATGCCACATATTGAACCACAACTTTTGAAAAGAAAGACCTCAACAACATT
TACCGATCCATTAGCAAACCAAAAGGCATTGAAAGCTTCAAAATTGGGTG
GCATCCAAAAGGCCAAAAATATAGTAGCCCCCAAGAAGACTGCACTTTCC
AAAGCAGTAGTTAAAGCAACAACAAAAGCAACAACTTCTAAATCTGCACC
TTCAAAAGCACCAGCTACAACTAAATCAGCTCCCAAGTCTCCTGCAAAGG
TTTGTCATTTAAATAATACCGTGAAGACTTGGTTTGAGTCCAGTTGATAT
TCAGGGATTTCTTTGACTTTATCGTAATTTTTTAATGCTTTCCCTAATAT
TTTAGTTAGCAATATATCGATCTGGTTTCCATTACTGGTTGAAGGGAACA
ATACCACACTTTTAGAAATGGGTCGTTCAAAAAACTAGAAGAATCCTTGT
TTGCTCCTTTGCATGGCATTCTAAATTCAAGGCCTAGCAAGCGTGCGTTG
ACGTCAAAATCCTGTGGACCTAATTAATGATGTCATTGCAGTGAAGTTGA
CGTCAAAAGAAAGAAAAAACTCAAAGGTTTTATGATGAAACTTCAAATCT
TTCAAAGAGATAGCTACGGAAAAGAACGCCATGCTCCTTTGCTATGCTGA
ATTATCTCGATGAATTTTTCATTTTAGGCTTCACCAAAGAAGAAGATGGA
CGGCTCAGCACCCGCTGTTTTATCTGAAAAAGTACTCTTCCTCGGTCAAA
AGGTATCTAAAATCTTTGTACTCACTCATTTATATATCGCTTCATAAATA
ATGTCATAGACTGTCATAGAATCAAATGGAAATGTTTTTGAGACGTTTTT
GCAATGTAGTGTAGTAATTATTATATACCTCTCGAAAGACATTGTTTTGA
AATTTCTTTTTAGTTATCAGTGGTGCAAGCTGACATTGCGACAATAGAAT
GTGATGCTCTTGTTCACCCAACCAATGGTGGTTTCAACACTTCTGGTGAA
GTTGGTAAGAATTACTGTGTTCGATCTTTCAGATTACAAATTTCTTCTAT
CTCAGCAAGGTAGAGCGGTAGAGAAATAAGTTTCCCCAGTGCTTCCATTT
TGATAATTACTTATTAATTTTAGGTAAAGCCCTGGTCAAAGTAGGTGGAA
CAGATTTGGAAAAGTCTATTCAAGAACTACACAAGTCTCACGGTGATCTC
ACTGAAGGCTCTGGTAAATTGCATTTATATCATTACTTTTTGTATCTTGA
ATTTTTCCAGAATTTACGTTATGTAAAATCTTTATAAATAGCATAAAAAG
GCATTGCTTTTGACGGTAGAATTTCGTGGCTTGGGGAGACAGAAAAAGTC
GCTCTTTCTTTGGTTTTCAAAATACTGTGTAAGCAAATGATAATAGAAAT
GTTAAAACATACTATCCTTTTAATTGTATTCCCATTTTCAGCTATGCTTG
GAGATGCACCGAATTTGAAGGTCAAACACATTATCCATGCATACTCACCT
ACTTATGACGCTAACGCTTCAACCAACGAAGAGAAATTAGAGGCACTGAT
CAATAGTTGTTTGACATTGGCCGACGAAAAGAACGTCTCTTCCATCGCAC
TTCCATCTATCGGGAGCGGAGTGTAAGTAATCACAGTGCTTACAAAGTTC
TTAGACGGATTTCTGTCTCAGCGAAGTATATTAAGAGGCTTTTCCTTCTT
AAAATTAGCAAAATTTGCAAAATTTAACTAAAATTTCAAGAATATGTGCT
AATCTGCTTGTAAAATCCACTTTCTATCTCAGATGAAAAACTTTACTTTG
ACCACGATAATGAACCTTTCATTCGTTGGTGGAGAGGATAGTTTAATAAT
TGTTGTTAAGGGGGTATCACATTATTAAAACCTGAGAGCTAAAAGATTTA
ATTTTTTGGGATCTGGAACCTCCTCACCAACCCAATGTCACCGTTGGATT
TATGCATTGACCGAAGGGCTAGACTCGAGACTCCTGGATGGGAAATGAAG
CCACTTATTTCCCATGCAGAACACCCGCGCCTGGTTTTTTATACAAACGC
TGGATTTAAAATAAAATCTATCGCTAGATTTAAAGAATACAGTCCTCGAG
GACAAAGAAATCGCTAGATGCAATCTGTCGTCACGATTGCTGTGCGTTTT
AGGCGCTTTCTGGATGGGAAATAAGTGGCTTCACTTTTTCTTGCCCGGGA
AAGGTTAGTGATTCTACTCTTGCCCTTCGGGCTTTAATGGGTTTATGGGA
AACGAGGTTTTCAGTTTCATTTTCTTCATGGTCCCATCAACGGAGGAAAG
AGAAGGTTGGCCATGGCCCCCTCACTTTCTTGCTGACTTAATTTGTTTTT
AAAAAACATGTTTTTATCCAATTTAAATACCGTTTTCTGGTGTTTAAAAG
ATGGAAAAACTAAAGAAAGAAAGTGAATGAAAAATTAAAATGAATTTTGT
GAATTATTTATTTGTGTTATAGACTCTACCAACTACCATTCACTACCAGT
TAAAGTAAATTTCCATTTCTCTTATTCTTCAAATTTTAGGAACGCGTACC
CGAAGCAAGTAGCAGCGCAAACTATTTTGAAAGCTATTTCCAACTACTTT
GTAACCGTTATGGCATCGTCATTGAAACAAATTTATTTCGTTCTTTACGA
TATGGAAAGTATCGGTGTGTATACTATTGAAATGGCTAGACTCGATTCTG
GCTCCTCTTAA Coding sequence (CDS) from alignment at sc0000333_pilon:106820..110080- >XLOC_017481 ID=XLOC_017481|Name=XLOC_017481|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2346bp|location=Sequence derived from alignment at sc0000333_pilon:106820..110080- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTGGAAGAGGTAAGCCTAAAAAGAAAGAAAGAATTAGCGTATCCAA
ACGTGCAGGAACTATATTTCCTGTGTCACGTGTCAGACGCTATTTAAGAG
GATGTACACACAAACTACGCATCGCAATGGGAGCTCCAATTTATCAAGCT
GCTGTAATGGAATATTTGTCAGCGGAAATTCTTGAATTAGCTGGTAATGC
AGCACGAGACAATAAGCGTTCTCGTATCACTCCACGACACATTCTTTTGG
CTATTGCCAATGATGAAGAGCTTAACAAGATGAGTGGAAGAGGTAAGCCT
AAAAAGAAAGAAAGAATTAGCGTATCCAAACGTGCAGGAACTATATTTCC
TGTGTCACGTGTCAGACGCTATTTAAGAGGATGTACACACAAACTACGCA
TCGCAATGGGAGCTCCAATTTATCAAGCTGCTGTAATGGAATATTTGTCA
GCGGAAATTCTTGAATTAGCTGGTAATGCAGCACGAGACAATAAGCGTTC
TCGTATCACTCCACGACACATTCTTTTGGCTATTGCCAATGATGAAGAGC
TTAACAAGCTTTTGAAAAACGTCACAATTGCATCTGGAGGTGTCATGCCA
CATATTGAACCACAACTTTTGAAAAGAAAGACCTCAACAACATTTACCGA
TCCATTAGCAAACCAAAAGGCATTGAAAGCTTCAAAATTGGGTGGCATCC
AAAAGGCCAAAAATATAGTAGCCCCCAAGAAGACTGCACTTTCCAAAGCA
GTAGTTAAAGCAACAACAAAAGCAACAACTTCTAAATCTGCACCTTCAAA
AGCACCAGCTACAACTAAATCAGCTCCCAAGTCTCCTGCAAAGCTTTTGA
AAAACGTCACAATTGCATCTGGAGGTGTCATGCCACATATTGAACCACAA
CTTTTGAAAAGAAAGACCTCAACAACATTTACCGATCCATTAGCAAACCA
AAAGGCATTGAAAGCTTCAAAATTGGGTGGCATCCAAAAGGCCAAAAATA
TAGTAGCCCCCAAGAAGACTGCACTTTCCAAAGCAGTAGTTAAAGCAACA
ACAAAAGCAACAACTTCTAAATCTGCACCTTCAAAAGCACCAGCTACAAC
TAAATCAGCTCCCAAGTCTCCTGCAAAGGCTTCACCAAAGAAGAAGATGG
ACGGCTCAGCACCCGCTGTTTTATCTGAAAAAGTACTCTTCCTCGGTCAA
AAGGCTTCACCAAAGAAGAAGATGGACGGCTCAGCACCCGCTGTTTTATC
TGAAAAAGTACTCTTCCTCGGTCAAAAGTTATCAGTGGTGCAAGCTGACA
TTGCGACAATAGAATGTGATGCTCTTGTTCACCCAACCAATGGTGGTTTC
AACACTTCTGGTGAAGTTGTTATCAGTGGTGCAAGCTGACATTGCGACAA
TAGAATGTGATGCTCTTGTTCACCCAACCAATGGTGGTTTCAACACTTCT
GGTGAAGTTGGTAAAGCCCTGGTCAAAGTAGGTGGAACAGATTTGGAAAA
GTCTATTCAAGAACTACACAAGTCTCACGGTGATCTCACTGAAGGCTCTG
GTAAAGCCCTGGTCAAAGTAGGTGGAACAGATTTGGAAAAGTCTATTCAA
GAACTACACAAGTCTCACGGTGATCTCACTGAAGGCTCTGCTATGCTTGG
AGATGCACCGAATTTGAAGGTCAAACACATTATCCATGCATACTCACCTA
CTTATGACGCTAACGCTTCAACCAACGAAGAGAAATTAGAGGCACTGATC
AATAGTTGTTTGACATTGGCCGACGAAAAGAACGTCTCTTCCATCGCACT
TCCATCTATCGGGAGCGGAGTCTATGCTTGGAGATGCACCGAATTTGAAG
GTCAAACACATTATCCATGCATACTCACCTACTTATGACGCTAACGCTTC
AACCAACGAAGAGAAATTAGAGGCACTGATCAATAGTTGTTTGACATTGG
CCGACGAAAAGAACGTCTCTTCCATCGCACTTCCATCTATCGGGAGCGGA
GTGAACGCGTACCCGAAGCAAGTAGCAGCGCAAACTATTTTGAAAGCTAT
TTCCAACTACTTTGTAACCGTTATGGCATCGTCATTGAAACAAATTTATT
TCGTTCTTTACGATATGGAAAGTATCGGTGTGTATACTATTGAAATGGCT
AGACTCGATTCTGGCTCCTCTTAAGAACGCGTACCCGAAGCAAGTAGCAG
CGCAAACTATTTTGAAAGCTATTTCCAACTACTTTGTAACCGTTATGGCA
TCGTCATTGAAACAAATTTATTTCGTTCTTTACGATATGGAAAGTATCGG
TGTGTATACTATTGAAATGGCTAGACTCGATTCTGGCTCCTCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000333_pilon | genome | sc0000333_pilon:106820..110080 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1003-1173:172 |
| Aaloc | 823-999:1269 |
| Aaloc | 733-819:1587 |
| Aaloc | 640-729:1799 |
| Aaloc | 565-639:2035 |
| Aaloc | 280-564:2748 |
| Aaloc | 1-279:3262 |
|
