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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000221_pilon:413520..415574+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_017326 ID=XLOC_017326|Name=XLOC_017326|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2055bp|location=Sequence derived from alignment at sc0000221_pilon:413520..415574+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGTCAGCAGTTACGACAGCAAAAGTAAACAACCAGAACCATTGTAA
AGAAGATACGGCACTCgacctcaaaaagaaaaatgagagCCTCAGCAAGG
AGGTTGAACGCCTCACCGCCCTCGTTAGCAAATCTGAACGTAAACGACGC
AAACAGAAAATTGTGTACGAGAAAAACATGGAAAATTTAAGTATACGGTT
AGTTGACTTTGAAAGTAATTTACGGAAAGAACAAAAAGAGATACAAGATT
TGATCTCaaaaaaaGAGCAACAGATCAAAGTGCGAGAGGAACTCGTTAAA
ACTCTACGAGATAAACTAACGCAGCAATTTTGTAACCAATGCGGCTGTGC
AAATCCGAAAGTCGACTCCATGGACGTGGACTGGGAACTAGATATCGATG
AAGATAAAAACgaagtcatcaaaaaattacCACCCCTAGATCTGCCGCCG
CCCGAAGAAAGCAAACAGATTAGTTTCACTAACCACCGCCCATTCCGCCC
TAAAAGTAAATTGTCGCCCGTGGCGGAAGAAAGTGAGATTTCGTTTGGTT
CTTCATTGCGTGATATTCACGCTGACCTAACACCAGATCGTTTCCACGCT
GCCTTGACGGCTTCGTTAGGAAGTTTACTGGATAATGTTGAAGATGGGGT
GGAAACGCCAACCAATTCTATCGGAGGCGGGTCGAACGAGGACAATTCGA
ACGCCGAGGAGAAGTCTCCTGAAGACCAGTGCGATATTAATGAAGCTAAC
ATTGAAGAGACTGTTTCTGTACTTACTCCTGCTTTTGAGCAAGTTGTTGT
TAAGGAAAAGGTAGCTTCCCCTTCGAATGGTCTGTTTACTTTCAGTGACA
GACTGAGCTCAAACATTTTATCTCTAGTGAATCAGAATTTAGCTCAAAAG
AAAACGAAGCGTATCGACTCCCCTCCTAACAAAGGAAAAGAGAACATTTC
TAACATACAAAATTTCTGTGCGAATATCGTGACTAAAAATCTCTTAGAAG
CTATGAATGAAATTTCGGCTTCTAAACAAAAAGAGTGTGTGATTTCGTCA
TCCACTCGTGAACGCACTCCAACAGTGGATCCATCTTCAGACAAAATGAA
GCGTTTACATACTGCTGCTGTATCCTTTGTTGATCAGTTCATTTCCAATG
ATTTTATGAGTGAATCGTTAAGTCAAAGATCACTCTCACCGAGAAGAGTA
CCTCCGATGTCTTCAGATGAAATACCGGATGAGATAAGTCAGGAAGATTC
CATTCTTActggaaatgaaaaacaaagggaGCTCTTTGATCATGCAAGAT
TGGATACAGACATGAATCCCAATAACTCGACCTTGGTAACTGAACCTACT
TTAGATGATGATAAATGTGTCGTTATCAGGGAGGAAGAACCAACCGAAAT
TGTGAGTATTGAGACAAACGAGAAACGAACGAGCTTCAACGACAATGACC
AGGAACTGAGTGAAAAACGAATATCCAATGTGGAGGCAAGCGATCAAAGA
ATACCcgacgacgaaaacgaaacgaccgacgaacaacgacTGCCTACCGA
GCCGAATGATAACCGAACTTCGACGGAGGAACTGAACGGACATTTAAAAT
CTGACGAACCAAGTGAAAAACAAATTCCAGACAATCAAATAACCGAACAA
CAGATTCAGGACGAGCAACAACAGTCCATGGAGCCAGCTAACGGAGAAAT
TGAAAACGAGCACCAGCCGGCAGATGATACGAGCGACCACAAGCGAACGA
ACAACGAAAATTCTCCACCGAATGACGCATCGCCCGATTCGacgaaaagt
aagaaaaagaaaaaaaagaagaagaaaaaacgtaaaagTGTTAGTAACGA
ATCAGATGAATCGTTCGTTTCGGCTACCGGTGAAAACACTCAAGATACTT
CAGCCGATCAACCTGTCATGGAACGTATGAAATTACCCGTTGAAGACAAA
TTCAGCCTCACATTGGATGATCAGTTAGATTTGTTGGGTGAAAGTCCAAC
AAGCCCTACCCATAGTACGTTAGGTGAACAGCTAAGTCAAACTACAAAAA
TGTAA Coding sequence (CDS) from alignment at sc0000221_pilon:413520..415574+ >XLOC_017326 ID=XLOC_017326|Name=XLOC_017326|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4110bp|location=Sequence derived from alignment at sc0000221_pilon:413520..415574+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGTCAGCAGTTACGACAGCAAAAGTAAACAACCAGAACCATTGTAA
AGAAGATACGGCACTCgacctcaaaaagaaaaatgagagCCTCAGCAAGG
AGGTTGAACGCCTCACCGCCCTCGTTAGCAAATCTGAACGTAAACGACGC
AAACAGAAAATTGTGTACGAGAAAAACATGGAAAATTTAAGTATACGGTT
AGTTGACTTTGAAAGTAATTTACGGAAAGAACAAAAAGAGATACAAGATT
TGATCTCaaaaaaaGAGCAACAGATCAAAGTGCGAGAGGAACTCGTTAAA
ACTCTACGAGATAAACTAACGCAGCAATTTTGTAACCAATGCGGCTGTGC
AAATCCGAAAGTCGACTCCATGGACGTGGACTGGGAACTAGATATCGATG
AAGATAAAAACgaagtcatcaaaaaattacCACCCCTAGATCTGCCGCCG
CCCGAAGAAAGCAAACAGATTAGTTTCACTAACCACCGCCCATTCCGCCC
TAAAAGTAAATTGTCGCCCGTGGCGGAAGAAAGTGAGATTTCGTTTGGTT
CTTCATTGCGTGATATTCACGCTGACCTAACACCAGATCGTTTCCACGCT
GCCTTGACGGCTTCGTTAGGAAGTTTACTGGATAATGTTGAAGATGGGGT
GGAAACGCCAACCAATTCTATCGGAGGCGGGTCGAACGAGGACAATTCGA
ACGCCGAGGAGAAGTCTCCTGAAGACCAGTGCGATATTAATGAAGCTAAC
ATTGAAGAGACTGTTTCTGTACTTACTCCTGCTTTTGAGCAAGTTGTTGT
TAAGGAAAAGGTAGCTTCCCCTTCGAATGGTCTGTTTACTTTCAGTGACA
GACTGAGCTCAAACATTTTATCTCTAGTGAATCAGAATTTAGCTCAAAAG
AAAACGAAGCGTATCGACTCCCCTCCTAACAAAGGAAAAGAGAACATTTC
TAACATACAAAATTTCTGTGCGAATATCGTGACTAAAAATCTCTTAGAAG
CTATGAATGAAATTTCGGCTTCTAAACAAAAAGAGTGTGTGATTTCGTCA
TCCACTCGTGAACGCACTCCAACAGTGGATCCATCTTCAGACAAAATGAA
GCGTTTACATACTGCTGCTGTATCCTTTGTTGATCAGTTCATTTCCAATG
ATTTTATGAGTGAATCGTTAAGTCAAAGATCACTCTCACCGAGAAGAGTA
CCTCCGATGTCTTCAGATGAAATACCGGATGAGATAAGTCAGGAAGATTC
CATTCTTActggaaatgaaaaacaaagggaGCTCTTTGATCATGCAAGAT
TGGATACAGACATGAATCCCAATAACTCGACCTTGGTAACTGAACCTACT
TTAGATGATGATAAATGTGTCGTTATCAGGGAGGAAGAACCAACCGAAAT
TGTGAGTATTGAGACAAACGAGAAACGAACGAGCTTCAACGACAATGACC
AGGAACTGAGTGAAAAACGAATATCCAATGTGGAGGCAAGCGATCAAAGA
ATACCcgacgacgaaaacgaaacgaccgacgaacaacgacTGCCTACCGA
GCCGAATGATAACCGAACTTCGACGGAGGAACTGAACGGACATTTAAAAT
CTGACGAACCAAGTGAAAAACAAATTCCAGACAATCAAATAACCGAACAA
CAGATTCAGGACGAGCAACAACAGTCCATGGAGCCAGCTAACGGAGAAAT
TGAAAACGAGCACCAGCCGGCAGATGATACGAGCGACCACAAGCGAACGA
ACAACGAAAATTCTCCACCGAATGACGCATCGCCCGATTCGacgaaaagt
aagaaaaagaaaaaaaagaagaagaaaaaacgtaaaagTGTTAGTAACGA
ATCAGATGAATCGTTCGTTTCGGCTACCGGTGAAAACACTCAAGATACTT
CAGCCGATCAACCTGTCATGGAACGTATGAAATTACCCGTTGAAGACAAA
TTCAGCCTCACATTGGATGATCAGTTAGATTTGTTGGGTGAAAGTCCAAC
AAGCCCTACCCATAGTACGTTAGGTGAACAGCTAAGTCAAACTACAAAAA
TGTAAATGGCGTCAGCAGTTACGACAGCAAAAGTAAACAACCAGAACCAT
TGTAAAGAAGATACGGCACTCgacctcaaaaagaaaaatgagagCCTCAG
CAAGGAGGTTGAACGCCTCACCGCCCTCGTTAGCAAATCTGAACGTAAAC
GACGCAAACAGAAAATTGTGTACGAGAAAAACATGGAAAATTTAAGTATA
CGGTTAGTTGACTTTGAAAGTAATTTACGGAAAGAACAAAAAGAGATACA
AGATTTGATCTCaaaaaaaGAGCAACAGATCAAAGTGCGAGAGGAACTCG
TTAAAACTCTACGAGATAAACTAACGCAGCAATTTTGTAACCAATGCGGC
TGTGCAAATCCGAAAGTCGACTCCATGGACGTGGACTGGGAACTAGATAT
CGATGAAGATAAAAACgaagtcatcaaaaaattacCACCCCTAGATCTGC
CGCCGCCCGAAGAAAGCAAACAGATTAGTTTCACTAACCACCGCCCATTC
CGCCCTAAAAGTAAATTGTCGCCCGTGGCGGAAGAAAGTGAGATTTCGTT
TGGTTCTTCATTGCGTGATATTCACGCTGACCTAACACCAGATCGTTTCC
ACGCTGCCTTGACGGCTTCGTTAGGAAGTTTACTGGATAATGTTGAAGAT
GGGGTGGAAACGCCAACCAATTCTATCGGAGGCGGGTCGAACGAGGACAA
TTCGAACGCCGAGGAGAAGTCTCCTGAAGACCAGTGCGATATTAATGAAG
CTAACATTGAAGAGACTGTTTCTGTACTTACTCCTGCTTTTGAGCAAGTT
GTTGTTAAGGAAAAGGTAGCTTCCCCTTCGAATGGTCTGTTTACTTTCAG
TGACAGACTGAGCTCAAACATTTTATCTCTAGTGAATCAGAATTTAGCTC
AAAAGAAAACGAAGCGTATCGACTCCCCTCCTAACAAAGGAAAAGAGAAC
ATTTCTAACATACAAAATTTCTGTGCGAATATCGTGACTAAAAATCTCTT
AGAAGCTATGAATGAAATTTCGGCTTCTAAACAAAAAGAGTGTGTGATTT
CGTCATCCACTCGTGAACGCACTCCAACAGTGGATCCATCTTCAGACAAA
ATGAAGCGTTTACATACTGCTGCTGTATCCTTTGTTGATCAGTTCATTTC
CAATGATTTTATGAGTGAATCGTTAAGTCAAAGATCACTCTCACCGAGAA
GAGTACCTCCGATGTCTTCAGATGAAATACCGGATGAGATAAGTCAGGAA
GATTCCATTCTTActggaaatgaaaaacaaagggaGCTCTTTGATCATGC
AAGATTGGATACAGACATGAATCCCAATAACTCGACCTTGGTAACTGAAC
CTACTTTAGATGATGATAAATGTGTCGTTATCAGGGAGGAAGAACCAACC
GAAATTGTGAGTATTGAGACAAACGAGAAACGAACGAGCTTCAACGACAA
TGACCAGGAACTGAGTGAAAAACGAATATCCAATGTGGAGGCAAGCGATC
AAAGAATACCcgacgacgaaaacgaaacgaccgacgaacaacgacTGCCT
ACCGAGCCGAATGATAACCGAACTTCGACGGAGGAACTGAACGGACATTT
AAAATCTGACGAACCAAGTGAAAAACAAATTCCAGACAATCAAATAACCG
AACAACAGATTCAGGACGAGCAACAACAGTCCATGGAGCCAGCTAACGGA
GAAATTGAAAACGAGCACCAGCCGGCAGATGATACGAGCGACCACAAGCG
AACGAACAACGAAAATTCTCCACCGAATGACGCATCGCCCGATTCGacga
aaagtaagaaaaagaaaaaaaagaagaagaaaaaacgtaaaagTGTTAGT
AACGAATCAGATGAATCGTTCGTTTCGGCTACCGGTGAAAACACTCAAGA
TACTTCAGCCGATCAACCTGTCATGGAACGTATGAAATTACCCGTTGAAG
ACAAATTCAGCCTCACATTGGATGATCAGTTAGATTTGTTGGGTGAAAGT
CCAACAAGCCCTACCCATAGTACGTTAGGTGAACAGCTAAGTCAAACTAC
AAAAATGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000221_pilon | genome | sc0000221_pilon:413520..415574 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 922-2052:925 |
| Aaloc | 1-921:1 |
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