XLOC_017288 (mRNA) -

Overview
NameXLOC_017288
Unique NameXLOC_017288
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000272_pilon:263940..265698+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_017288 ID=XLOC_017288|Name=XLOC_017288|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1759bp|location=Sequence derived from alignment at sc0000272_pilon:263940..265698+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTTCAGaagtttatttgttttgacGATTTTGGTATTAAGTTTACA ACTGGGGGAGCATGGAGCTGAAGGAAAGAAGATCATTTGTACGCTTTACC GTTGGAAGAATAACAAAATGTGCAAAGATCATTTCACAAAGAAAAGCATT GAAGATCCAGTATACATGAACGTAAGTAAAAAATTTATGAACATCATTTG AGGATAACATCAACAGTTTTAGTAGAATTCAACACGTTAAAGCATGGATG TAACTAACTATGGTAATAGTATCCGCAACAGGATGTTAGAAATTCCTAAT ttccaaattattatttttggtgtatttttcaaaacttgtcgacttttaaa tttcaaatttgaattttttgcgaTCACCAAATCAGCATGGAGCCTGtcat tgaattaaaaaaaaacaaagacaaaggTTATGCAAGAATAGTAGACCTTT TGTAACGTCACAATGTCCAGTTCAAATGAGGTGCGAATATTTTCTAAATG CATAATGTACAAAATAATACAGTGCAGATGACATGGAGATAAAAATTCAT CATGAAGAAGGAGTGTGGTATTGTCGTTTGCAATCCTTATAAGGAATGTA AACTTCTCTCTTCGTCGCAAATGTTGCTATGGAATAAGTAAATCTAATTT GGACTTTTCTATTGTCATCTTAAAAGTAACATCTATTGTGAAAATGTGCG ATTTTGAAACGTAGAGGGGTCACATCATATTTGACAACCAATTAATTGTT ATGAGAACAAGGAAGACCACGCCCAAAACAAGTAACAAAACTAAAACCAT TCCATAGAACTGATTATAAGAGAAAACGCTGCCATTATTCTATAATATGA ACCAAAGGGAAACTTTGAGAGGCTAATTTTACGAAACGATTATAATCCAA TTTGCCAATATCTTTAAGAATCCAAACAAGACTTAATTTAAGGTTGATTT AATGCTCGCTTTTTCTCCTCCAAGCTTTAACTTTTGATAACATTACATTA GTCGCCCCAGAGTATCACTGAACAACTTTTCGTAtggaacacccccttct cacagacccagtaggaccTCTgaccactggaaaaattggccaagaAATGT CCCAgcggaaaattatactccaatttttccccgctgaaaatagtcaaata aacaaatcttcACTACTATTATTCCTATCCCTACTGAGTTTTCTggctta aaaacaaaaaaaaattgaaaaaatatgtaaatgtcAATCCTCATCGAGTC TCAGTCCGTTatctttatccccactggttgaaaaagtcctactgggtctg taagaagggggtgttatgGAGTAGCAACGGACAGGCCAATGCTCTTCGAA GATAGTGACGATGACTTCCGGTTTTCTTAATCAATCAAGTTTTCAAACCT ATAAGCGAATTTCTTTCCGCTATCGTTTGCTGTGGTTCATTgaaaagaaa tcccgaaagaaaaataaacaaataaatcaaaaaatacacaatttgagaca cataacaaacaaatatcgaaaacaTCTTTCAAAGCTTCTCGATACTGTAA TTTAAGATTTACACGGTTACGGAATATAACCCTTTTTATATcgataaaat aattttctttttatttcatttttgcaGGGGCCAGAAGACCACCAGCAGCA ACAAATTCGACATATCCGCAGAAAACGCCGGCAAATCACCAACGCTGAGC TGGAAGCACTGGATCGAGAGATATTGGAATATCTAAATGGTAACTTTAGC GATGAGTAA

Coding sequence (CDS) from alignment at sc0000272_pilon:263940..265698+

>XLOC_017288 ID=XLOC_017288|Name=XLOC_017288|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=606bp|location=Sequence derived from alignment at sc0000272_pilon:263940..265698+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTTCAGaagtttatttgttttgacGATTTTGGTATTAAGTTTACA
ACTGGGGGAGCATGGAGCTGAAGGAAAGAAGATCATTTGTACGCTTTACC
GTTGGAAGAATAACAAAATGTGCAAAGATCATTTCACAAAGAAAAGCATT
GAAGATCCAGTATACATGAACATGGATTTCAGaagtttatttgttttgac
GATTTTGGTATTAAGTTTACAACTGGGGGAGCATGGAGCTGAAGGAAAGA
AGATCATTTGTACGCTTTACCGTTGGAAGAATAACAAAATGTGCAAAGAT
CATTTCACAAAGAAAAGCATTGAAGATCCAGTATACATGAACGGGCCAGA
AGACCACCAGCAGCAACAAATTCGACATATCCGCAGAAAACGCCGGCAAA
TCACCAACGCTGAGCTGGAAGCACTGGATCGAGAGATATTGGAATATCTA
AATGGTAACTTTAGCGATGAGTAAGGGCCAGAAGACCACCAGCAGCAACA
AATTCGACATATCCGCAGAAAACGCCGGCAAATCACCAACGCTGAGCTGG
AAGCACTGGATCGAGAGATATTGGAATATCTAAATGGTAACTTTAGCGAT
GAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_017288XLOC_017288-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000272_pilongenomesc0000272_pilon:263940..265698 +
Properties
Property NameValue
Aaloc172-303:1628
Aaloc1-171:1