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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:1629507..1633781+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_017157 ID=XLOC_017157|Name=XLOC_017157|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4275bp|location=Sequence derived from alignment at sc0000049_pilon:1629507..1633781+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTGTACGAGAATAAACACGGTCAAAATGTTTTACACATGATGTTGGA
AAAGCTGGAGCCAGAGGACAAGAAAACTTTTCAATTGTTTCATAATATTC
TGAAAAAGGTATCTCACGTAGTCTTTCTTTCACAAATTAtcttttatttc
agaaatttcaaaaacctgtcgcgatctttttcaaattgtcGCAATCTTGA
ACAGCGATAGTTTGAGAATCATCGCATGCCATATAAACATTATGCTCCAT
ACCGCGAAATTCctataactcaaacaaatttgtgttccccgtgcgtgttc
gagctGTGGAGACTGTAAATTATATcaatttatattattttctttttcat
cagtGTAATTTGACCAAGGAGTTCAGCAACAAGGTGGACAATAATGGTTT
CACACCTTTGCTATCATTCGTCTACAACATTGCAAGTAAAAACCAGATGA
AGAGAACTCTACCGCAGTACACCAAACTTGTTAAAACTTTGTTGACAGAA
TGTTTCGTTGATACCGATATTCTGGTTCAAAAGACGGCAATGGGACCTGA
CGACAAGGTTAGTTTTCTCATTAGATGCTGGTTAGATGCTACACGGACAT
TCCTCAAGGTGTCCTGTAATCTACCggtcaatgttcttagccaaattatt
acttttctaattattaaaaataaataaaaaatgtcacggtggagtgtgtt
ggtttgagttttctagagaCTTATTATTAAGCTgcgcatttttctgatag
ttgattattattaaaaatatttctttttcaaaagtcttttgttgatagtt
tctctttccaaattattttctcaaaaatgtttaattttattatcaggtag
gtccataaaagtatagctggtgatatcaaaatcaaaatcttcttaaTTTT
ATATCTTCTACTAGCCTGCTCTACAATACACTTTGTGGCCTAAACCCTCC
CTGGATTACGAAAAATTAGACGAAAATCAAGAAAAGTTCAAAGGTTACAA
CAGTTTTGGACAAATGAACATTTTCCATTTACTTGCTATGAAGAATATCA
GCCGAGAAGTTATGGAGGTGTTTTACAAACATGTGCCCAAAATTGGTGAA
CTCCTGAATGCCAAAGATCTTCATGGTCGCACCCCTTTACATTACAAGCT
GATGAATACTACCAATTACACGCAAGACTTTTTGGATCATGGAGCGAACG
TTGAAATAGGGTCAAGTAATAAGGAGAAAGATGAACTGGCACCTACTCTA
GTGATTGCGATGAAATCTTGGATTAAAATCACGAAAGCAGATGAAATTGA
TGAGGAAGAAAGGTTAGTGTCTTTATTACTGTAAAGAAAGATTTAGTCTA
GGAGAGTTTCCCCAATATTTTCACTATTGACTATCTTACAGTGGTAGATC
AACTGAAACGCTTGAGTTAGTGAAACTCTAAATTCCGTGACTATTTTCAA
GAAGAAATCATAAataatttccttttttcacctgTTAGTTTTGGTAAAAT
TTTGTTGAGAAGATCtttcataacaaaaataatgtttttgcttttttttt
catcagatTTGGTGGTTCCTCTACAGAAGAAACAGATGACGGCTTATTAG
CAGTATTGAAAGAATGCAAAAATGTCAACCTGGTTGACCAGAATGGAATG
TCTGCTGCACATCACGCATCGCTTAAGAAAAAGCCTTGTAAGTTTTCCTA
TACATCGTTAAAAGCTTCCAGATTTATCAATTGAACTCTAGacattttca
aaacaccaaaaagTAAGCAAttttaaaagatacgtcacgcATCTGATCAT
AGATCTACCGTATATGATATCCCCTTCAGCAGCATTGATATCATAAGGAC
AAAGTTCCAGATATGCTTAGATATTCAGTTTCCATCATtactttaaccct
attattatcaggctttttcgggttttgtattctcaagggtcACCCCccgg
tgttttccaccagccttgcataacttttgatctagaaaagatttggactt
gaaacttggcagaaatgttttctaccataaaaggagttaatagaaaaaaa
tttgggttgatgacgccATCATgaagctgatgacgtcatcacaaagtttc
acaattatcgctgaccaatgaaaaagtactattcaataaattagcaatta
aagttgaacgaatggagattttgcaagcctgttttgaatttctaaaagca
aaaaagaataCCTTTAACAtaatttgccggtttttaacatactaataaaa
ttagggttatattaaaagtcagaaactttcagagtgttacaaaacatttt
caatgagcttattagcaaaagagtgccagcctggtggaaccccccccctg
ataaaaatagggttaaggaataatcagatggtttgtacAATTTTGCATGT
GGgatccttctattgtcctgagcaaaattcttaaaatatttttacctaac
tattttccaaaggttagatatttaagttacaagtgtttggcttttaggat
gaaaacaatagaatttgaaCGTAAGAAACGTGTAAGAACAAGAACCCATt
tgcaaaaatatcaaatttggaaaattgttacacaaTTAAATACTTTGAAG
TTTTACTAAGGACCACAGAAGATTTCtgtaatctaaatatctcaaaccat
ctgattatccctttaaagacTCCAGAATCTTTTATCAATTGGATCTTGAA
CATTTTTCGAGATACCGAAAAGTTTGCAAATTGAAAGAAAGTCAATCTAT
AAATGAATCTTCATATTTTCTTATAGCTGTCAGCAAGAAAATTGCTATTT
TCAAACGTCTCTTGAAAGCTGGTCTCGATGTGAACGCGCAAGATGACAAA
AATGGTCGCACAGTGTTACACAATCTAGTAATGCTGGCATCAGGTGATTA
TGAAACAACCAATGAACTTGAAATATTGCTGATATCTCATGGTGCACTAT
TAGATGTTGAGTGTTCGCGCGGCCGCTTCCCGATTCATTACGCATTCTTT
GACAAATCAAACAGGTAAGGGGGTAATTGctttttattataaacataCTT
TCGTGTTTACGTACGTGTTTCACAAAGCCGATTTTTCGTAAAAGTAAACT
TTTTATAAGGCTGGTGTCATTTGATGGTCCTGTATGATCCCTTATATACA
TTTAAACGCTAAGAATCGATATAATGGAAAAAAGCGGGTAGAGGAAATTT
CGTTTCGAATAGTGCCCGACGTTTTTGACATTTGTCTGCTTGGTCAAATA
ATTAATAtataaagttcttccgtctcagtcagacggatttccgtttCCAG
GAAGATACAAATAAGGCTTCTCTTTCTTCAAGCTCCACAAAATTatgcaa
agttttaaaaattgttgtttAAAGTCCGATTTCCAGCCTGGGTCaaaaaa
aTGTGCTTTTACCACTATATAATCAAAGCGATGCGAAGCTTTGGATATTT
TTCAAAGAAGTATTCTACTTGGTTGATTCTTGATTTTATTTCAGCAAGAA
ATTGGACTCGACAAACATTTGCGATCCCATGTCTCTCATTCATCTTTTGT
GTACTGAATACAACCAATCTAAATTCAACATGAAAGATTACGTCAGTCAT
CAAGACAATGAGGGGAATACGCCGCTGCATTATGGGTGCCAACGTGGTGC
GACTATCTCATGCATGCAGttgaaaaaggtatttttgagaaattgtgGAG
TAGGTAGGCCGGTTGGCGGACGGGGttattcaacaaaattttaagaatgt
gTTCGTCAATTTTTTGCGTAAAattccgtctcagacgaaaaatgttgttt
tgactACTGGTGATGATGCCTTCTGTCATTGCTCTATCAGTGGATCAGAA
CCTTTTCGCACGTTGGTCTTGACTTTTATCTTCGTGTCCCTTACAAATGG
AAGACAACCCCCGTCCCCTTGTTTTAGctagtttatgtatgtgtgttttc
caGCGACTGAGACGGTTAGGGTTCGACTTGGCTAGATCATGACAACTGAG
GACGACGCTTAATCAGcatttttaccgtcctcgattttgcgggtcaaaag
ctttaagtggacacTAGGCTAGTCAAAACTGAGTTtcattccaaatcgct
tcagtcaatCTGCTGTCCTCGAAAAGTGCAAATACTTAAACTCGCTAATA
TCTGCCACCTGGACAGCACATGggaaattttgtttgctttttcttAGCTT
GGTGCAGACGACAAGCTGACAGATAAGAATGGAAACACGCCTTTGGCTAT
TGCATTGAAAAACAAGCATCATGGG Coding sequence (CDS) from alignment at sc0000049_pilon:1629507..1633781+ >XLOC_017157 ID=XLOC_017157|Name=XLOC_017157|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2682bp|location=Sequence derived from alignment at sc0000049_pilon:1629507..1633781+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTGTACGAGAATAAACACGGTCAAAATGTTTTACACATGATGTTGGA
AAAGCTGGAGCCAGAGGACAAGAAAACTTTTCAATTGTTTCATAATATTC
TGAAAAAGATGGTGTACGAGAATAAACACGGTCAAAATGTTTTACACATG
ATGTTGGAAAAGCTGGAGCCAGAGGACAAGAAAACTTTTCAATTGTTTCA
TAATATTCTGAAAAAGtGTAATTTGACCAAGGAGTTCAGCAACAAGGTGG
ACAATAATGGTTTCACACCTTTGCTATCATTCGTCTACAACATTGCAAGT
AAAAACCAGATGAAGAGAACTCTACCGCAGTACACCAAACTTGTTAAAAC
TTTGTTGACAGAATGTTTCGTTGATACCGATATTCTGGTTCAAAAGACGG
CAATGGGACCTGACGACAAGtGTAATTTGACCAAGGAGTTCAGCAACAAG
GTGGACAATAATGGTTTCACACCTTTGCTATCATTCGTCTACAACATTGC
AAGTAAAAACCAGATGAAGAGAACTCTACCGCAGTACACCAAACTTGTTA
AAACTTTGTTGACAGAATGTTTCGTTGATACCGATATTCTGGTTCAAAAG
ACGGCAATGGGACCTGACGACAAGCCTGCTCTACAATACACTTTGTGGCC
TAAACCCTCCCTGGATTACGAAAAATTAGACGAAAATCAAGAAAAGTTCA
AAGGTTACAACAGTTTTGGACAAATGAACATTTTCCATTTACTTGCTATG
AAGAATATCAGCCGAGAAGTTATGGAGGTGTTTTACAAACATGTGCCCAA
AATTGGTGAACTCCTGAATGCCAAAGATCTTCATGGTCGCACCCCTTTAC
ATTACAAGCTGATGAATACTACCAATTACACGCAAGACTTTTTGGATCAT
GGAGCGAACGTTGAAATAGGGTCAAGTAATAAGGAGAAAGATGAACTGGC
ACCTACTCTAGTGATTGCGATGAAATCTTGGATTAAAATCACGAAAGCAG
ATGAAATTGATGAGGAAGAAAGCCTGCTCTACAATACACTTTGTGGCCTA
AACCCTCCCTGGATTACGAAAAATTAGACGAAAATCAAGAAAAGTTCAAA
GGTTACAACAGTTTTGGACAAATGAACATTTTCCATTTACTTGCTATGAA
GAATATCAGCCGAGAAGTTATGGAGGTGTTTTACAAACATGTGCCCAAAA
TTGGTGAACTCCTGAATGCCAAAGATCTTCATGGTCGCACCCCTTTACAT
TACAAGCTGATGAATACTACCAATTACACGCAAGACTTTTTGGATCATGG
AGCGAACGTTGAAATAGGGTCAAGTAATAAGGAGAAAGATGAACTGGCAC
CTACTCTAGTGATTGCGATGAAATCTTGGATTAAAATCACGAAAGCAGAT
GAAATTGATGAGGAAGAAAGatTTGGTGGTTCCTCTACAGAAGAAACAGA
TGACGGCTTATTAGCAGTATTGAAAGAATGCAAAAATGTCAACCTGGTTG
ACCAGAATGGAATGTCTGCTGCACATCACGCATCGCTTAAGAAAAAGCCT
TatTTGGTGGTTCCTCTACAGAAGAAACAGATGACGGCTTATTAGCAGTA
TTGAAAGAATGCAAAAATGTCAACCTGGTTGACCAGAATGGAATGTCTGC
TGCACATCACGCATCGCTTAAGAAAAAGCCTTCTGTCAGCAAGAAAATTG
CTATTTTCAAACGTCTCTTGAAAGCTGGTCTCGATGTGAACGCGCAAGAT
GACAAAAATGGTCGCACAGTGTTACACAATCTAGTAATGCTGGCATCAGG
TGATTATGAAACAACCAATGAACTTGAAATATTGCTGATATCTCATGGTG
CACTATTAGATGTTGAGTGTTCGCGCGGCCGCTTCCCGATTCATTACGCA
TTCTTTGACAAATCAAACAGCTGTCAGCAAGAAAATTGCTATTTTCAAAC
GTCTCTTGAAAGCTGGTCTCGATGTGAACGCGCAAGATGACAAAAATGGT
CGCACAGTGTTACACAATCTAGTAATGCTGGCATCAGGTGATTATGAAAC
AACCAATGAACTTGAAATATTGCTGATATCTCATGGTGCACTATTAGATG
TTGAGTGTTCGCGCGGCCGCTTCCCGATTCATTACGCATTCTTTGACAAA
TCAAACAGCAAGAAATTGGACTCGACAAACATTTGCGATCCCATGTCTCT
CATTCATCTTTTGTGTACTGAATACAACCAATCTAAATTCAACATGAAAG
ATTACGTCAGTCATCAAGACAATGAGGGGAATACGCCGCTGCATTATGGG
TGCCAACGTGGTGCGACTATCTCATGCATGCAGttgaaaaagCAAGAAAT
TGGACTCGACAAACATTTGCGATCCCATGTCTCTCATTCATCTTTTGTGT
ACTGAATACAACCAATCTAAATTCAACATGAAAGATTACGTCAGTCATCA
AGACAATGAGGGGAATACGCCGCTGCATTATGGGTGCCAACGTGGTGCGA
CTATCTCATGCATGCAGttgaaaaagCTTGGTGCAGACGACAAGCTGACA
GATAAGAATGGAAACACGCCTTTGGCTATTGCATTGAAAAACAAGCATCA
TGGGCTTGGTGCAGACGACAAGCTGACAGATAAGAATGGAAACACGCCTT
TGGCTATTGCATTGAAAAACAAGCATCATGGG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:1629507..1633781 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1264-1341:4198 |
| Aaloc | 1081-1263:3496 |
| Aaloc | 844-1077:2779 |
| Aaloc | 712-840:1558 |
| Aaloc | 313-708:915 |
| Aaloc | 109-312:354 |
| Aaloc | 1-108:1 |
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