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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000234_pilon:410059..412784- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_017141 ID=XLOC_017141|Name=XLOC_017141|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2726bp|location=Sequence derived from alignment at sc0000234_pilon:410059..412784- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAACAAACGATAGAATTTTTGCAAACACCGTTGTTGTGTACAGGACT
CTGTCCACACATAGCTGTTGCCTCGGACAAGTCTACCCCTGGTCGCGAGA
CAAATCACGCCATAATGATCATCATACCATTTAACGGCAAACGCATTCCG
ATGCCTATCGATGCTCCTTTGGTTTACGAGATGAACGATGAAAACAATTT
AGAAGGTGGAAGTGGAGAAGATCTAGCTTACCAAATTACAGATGTTCTGA
AAAAGAGGCTTAAGATCGACGAAGAAAAAATTCATTACATCAGAGGTTAG
TAATTATTACGTTCTTCATTTGATTTTGAGGTGAAAGTCTCTTGAAAAAG
AAAGTCATGGAAGAGGCTGGGATCTTAAATTCTTAATTTTAGCTTTCCCA
TTGGGTTTCTGCATTATCCCTCGACTGAATTTTGGTTGTTTGTTAGAAGA
GTCACCAGTAAATTTGTCAGTAAAGTAAATTCATTTCTTTTAAAGCATTC
CATGCTGATGGACAATACCAATGCGATACGTTTCAAAGCAGGTTCAAGTC
TAACTTCCAATCGCCAGTCAAGGAAATTGATCCGTTTGTTCTATTACCGT
GGGATACATCACACTGGATGGACCTTGCTATGGAAAAACTGTATGAGGAT
AGCCTTTCTTCGAGCTTCTTGAAACAGTTAGTCACACGGGCCAATCGTTT
TAATACAATGTTTCGACATGGGAAAGGGCACGAGGAATACAAGGGGTTAG
CAGATTCACTTGGTTTGAAGTCGTTAGAGGTTGTTGGGTATTCAACTACA
AGGTTTTTCTCCTCCTCATATGAACAGTGGGATAAAATCTATCATTCTTA
CCCGGCACTCATCGAAACTTATAAAAAGTTCAGAGAACAAGGTGATAATT
GCGACGAAACAAGATACCAGGTAGGTTGACCCGATTTTATTACATACTTC
AAATAATTCAGTCAGTATATCATGGCTCGTAAAAATGGTTGTTCTTCAAG
AATGATTTCACATTCCTCTTTTGAAAATGTGATAAGTATAATGAAATAAT
TTGTATTAATTATGTTCAATTTCTTACTACGGATTGTTTGTGTGATGGTC
ATTTGTTTTCTCTTATTCAGATCCGCGGGCAAGATTTTGCTATCGACATC
TGTGGCGCAGCTGATGTTCTAAGACCAATCGTCTTGATGATGGTACGCTG
CCAAGCAGTTGATTTACCTCTGTGGAAAGTACCGACCTGGTTTCACAGAA
TGATCCGTCAGCTTGAGTCAACAGCAGAAGAAGTGAAGAAGAGGGAAGGA
TTCTGCTCTTCACTCAACTTGACCTACCTTGGTGAAAATTGGAAATCTTT
GACCGCGAACGAAAAGAACAAGAGGAGTGAAAAGTTGGGGACATTCAAGA
ATGTAGATGTAATTAAAGGCTGGTTAGTTACAGACAAAGGAACTGTCGAA
TCTGAAGCAGGTGATGATTCTCTCTATATAATAATAGCCTTACGTGTCTG
AAGCCTTTTTAGCAGCGTTTTTGTTTTCGCTAGCGATTTAAACTCGCACG
GGACTTTTATTAGGGGGTATTGTTTCATTTAAAAGTAACAGTTTTCTTCC
TGTTTTATTCGAAATACAAACAGTGGAATCCCCCGGTTGAAAATCATTAG
CACGTCACTGAAGTAATTGCAAAAAAGAAAAAAATTGGATTACTGAAAAG
AAATGAAAATGTCTTTGGCGAAGATTAAGATACTTATTTTGGTATATTTT
TAAAAAATTATTGTCTTCAATGAAGCTAATGAAATAGTGAAAAGTCGTCT
GTGATGACGTCTGGGACACCTAGTATTTATTATATTATATATTCTACTTC
TAATATCGATGGATATTTTGTGTTGTAACAAAAAATGGTAAGAAATTGTT
TAGTTCTAGAGTACATAGATAAAAGTATTGAATGGTTTATATTTGAACTT
GTATAAATTTCGTTATAGCTGATACGAAGAAAACCAAGAAGAAACAATAT
ACTTGGAAGTATCGGAGCTCAGAAGAGTGTCTGTCGGATCTTGTCACTCT
GGCAAAAGAAGCGAAAACCCTAATATCAACGAGGTTCGATTCGTCAGTTG
ACCAAGAGGTTAAAGATCTAGCCGTTATTTTTGATCTCGAAAATACGGTT
CTCCTACTTAAAGATTTTAAACGTGTGGGGAATAAGTTGAAAGCAAAGCG
CAAAGATATCACAAAATTTGAAACTAATGGTGCAAAGGAGTTCGAAAGTT
TTTACAAACACGTTTGTCAACTACCTCAAGTAGAAAGCATGTACGAAAAG
GACTCTAATCTTGATTTGCTCCCACATCATGCCTCAAGTGTTTTGAAAAA
ATACCGATCCAGTATAAAATCCATGGTATTTGAGACCCACACAAAAGATC
TATTCACTACACCGAAAGGAGAGAAGTTGAAGAATGTTTCCCAGTCACAG
TTGGTCGAAATTAAGCCGTCAAAGGAACGAGATTTGACCCAGCTTTTTAC
TTTAACCTTTGAAAACGGAATATCTGAGGAAGCCATCGTTGCCGAAAGCA
AGTTTGCTGAGTTGCTATATACAAACGAGGCTGTTTATACTTCTTTTGGA
AAGGAAGTCCGCATTGCCTTGGACGTTGCCCTCAGATCAGGTGGCTGTGA
AGCTATAGTCGAGGGTTTCTATAGCTTGGTCAAAAGAAACATAAAAAGAA
CGGTCGTCAAAGAAATAAAACTCTAA Coding sequence (CDS) from alignment at sc0000234_pilon:410059..412784- >XLOC_017141 ID=XLOC_017141|Name=XLOC_017141|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3636bp|location=Sequence derived from alignment at sc0000234_pilon:410059..412784- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAACAAACGATAGAATTTTTGCAAACACCGTTGTTGTGTACAGGACT
CTGTCCACACATAGCTGTTGCCTCGGACAAGTCTACCCCTGGTCGCGAGA
CAAATCACGCCATAATGATCATCATACCATTTAACGGCAAACGCATTCCG
ATGCCTATCGATGCTCCTTTGGTTTACGAGATGAACGATGAAAACAATTT
AGAAGGTGGAAGTGGAGAAGATCTAGCTTACCAAATTACAGATGTTCTGA
AAAAGAGGCTTAAGATCGACGAAGAAAAAATTCATTACATCAGAGATGAA
ACAAACGATAGAATTTTTGCAAACACCGTTGTTGTGTACAGGACTCTGTC
CACACATAGCTGTTGCCTCGGACAAGTCTACCCCTGGTCGCGAGACAAAT
CACGCCATAATGATCATCATACCATTTAACGGCAAACGCATTCCGATGCC
TATCGATGCTCCTTTGGTTTACGAGATGAACGATGAAAACAATTTAGAAG
GTGGAAGTGGAGAAGATCTAGCTTACCAAATTACAGATGTTCTGAAAAAG
AGGCTTAAGATCGACGAAGAAAAAATTCATTACATCAGAGCATTCCATGC
TGATGGACAATACCAATGCGATACGTTTCAAAGCAGGTTCAAGTCTAACT
TCCAATCGCCAGTCAAGGAAATTGATCCGTTTGTTCTATTACCGTGGGAT
ACATCACACTGGATGGACCTTGCTATGGAAAAACTGTATGAGGATAGCCT
TTCTTCGAGCTTCTTGAAACAGTTAGTCACACGGGCCAATCGTTTTAATA
CAATGTTTCGACATGGGAAAGGGCACGAGGAATACAAGGGGTTAGCAGAT
TCACTTGGTTTGAAGTCGTTAGAGGTTGTTGGGTATTCAACTACAAGGTT
TTTCTCCTCCTCATATGAACAGTGGGATAAAATCTATCATTCTTACCCGG
CACTCATCGAAACTTATAAAAAGTTCAGAGAACAAGGTGATAATTGCGAC
GAAACAAGATACCAGCATTCCATGCTGATGGACAATACCAATGCGATACG
TTTCAAAGCAGGTTCAAGTCTAACTTCCAATCGCCAGTCAAGGAAATTGA
TCCGTTTGTTCTATTACCGTGGGATACATCACACTGGATGGACCTTGCTA
TGGAAAAACTGTATGAGGATAGCCTTTCTTCGAGCTTCTTGAAACAGTTA
GTCACACGGGCCAATCGTTTTAATACAATGTTTCGACATGGGAAAGGGCA
CGAGGAATACAAGGGGTTAGCAGATTCACTTGGTTTGAAGTCGTTAGAGG
TTGTTGGGTATTCAACTACAAGGTTTTTCTCCTCCTCATATGAACAGTGG
GATAAAATCTATCATTCTTACCCGGCACTCATCGAAACTTATAAAAAGTT
CAGAGAACAAGGTGATAATTGCGACGAAACAAGATACCAGATCCGCGGGC
AAGATTTTGCTATCGACATCTGTGGCGCAGCTGATGTTCTAAGACCAATC
GTCTTGATGATGGTACGCTGCCAAGCAGTTGATTTACCTCTGTGGAAAGT
ACCGACCTGGTTTCACAGAATGATCCGTCAGCTTGAGTCAACAGCAGAAG
AAGTGAAGAAGAGGGAAGGATTCTGCTCTTCACTCAACTTGACCTACCTT
GGTGAAAATTGGAAATCTTTGACCGCGAACGAAAAGAACAAGAGGAGTGA
AAAGTTGGGGACATTCAAGAATGTAGATGTAATTAAAGGCTGGTTAGTTA
CAGACAAAGGAACTGTCGAATCTGAAGCAGATCCGCGGGCAAGATTTTGC
TATCGACATCTGTGGCGCAGCTGATGTTCTAAGACCAATCGTCTTGATGA
TGGTACGCTGCCAAGCAGTTGATTTACCTCTGTGGAAAGTACCGACCTGG
TTTCACAGAATGATCCGTCAGCTTGAGTCAACAGCAGAAGAAGTGAAGAA
GAGGGAAGGATTCTGCTCTTCACTCAACTTGACCTACCTTGGTGAAAATT
GGAAATCTTTGACCGCGAACGAAAAGAACAAGAGGAGTGAAAAGTTGGGG
ACATTCAAGAATGTAGATGTAATTAAAGGCTGGTTAGTTACAGACAAAGG
AACTGTCGAATCTGAAGCAGCTGATACGAAGAAAACCAAGAAGAAACAAT
ATACTTGGAAGTATCGGAGCTCAGAAGAGTGTCTGTCGGATCTTGTCACT
CTGGCAAAAGAAGCGAAAACCCTAATATCAACGAGGTTCGATTCGTCAGT
TGACCAAGAGGTTAAAGATCTAGCCGTTATTTTTGATCTCGAAAATACGG
TTCTCCTACTTAAAGATTTTAAACGTGTGGGGAATAAGTTGAAAGCAAAG
CGCAAAGATATCACAAAATTTGAAACTAATGGTGCAAAGGAGTTCGAAAG
TTTTTACAAACACGTTTGTCAACTACCTCAAGTAGAAAGCATGTACGAAA
AGGACTCTAATCTTGATTTGCTCCCACATCATGCCTCAAGTGTTTTGAAA
AAATACCGATCCAGTATAAAATCCATGGTATTTGAGACCCACACAAAAGA
TCTATTCACTACACCGAAAGGAGAGAAGTTGAAGAATGTTTCCCAGTCAC
AGTTGGTCGAAATTAAGCCGTCAAAGGAACGAGATTTGACCCAGCTTTTT
ACTTTAACCTTTGAAAACGGAATATCTGAGGAAGCCATCGTTGCCGAAAG
CAAGTTTGCTGAGTTGCTATATACAAACGAGGCTGTTTATACTTCTTTTG
GAAAGGAAGTCCGCATTGCCTTGGACGTTGCCCTCAGATCAGGTGGCTGT
GAAGCTATAGTCGAGGGTTTCTATAGCTTGGTCAAAAGAAACATAAAAAG
AACGGTCGTCAAAGAAATAAAACTCTAACTGATACGAAGAAAACCAAGAA
GAAACAATATACTTGGAAGTATCGGAGCTCAGAAGAGTGTCTGTCGGATC
TTGTCACTCTGGCAAAAGAAGCGAAAACCCTAATATCAACGAGGTTCGAT
TCGTCAGTTGACCAAGAGGTTAAAGATCTAGCCGTTATTTTTGATCTCGA
AAATACGGTTCTCCTACTTAAAGATTTTAAACGTGTGGGGAATAAGTTGA
AAGCAAAGCGCAAAGATATCACAAAATTTGAAACTAATGGTGCAAAGGAG
TTCGAAAGTTTTTACAAACACGTTTGTCAACTACCTCAAGTAGAAAGCAT
GTACGAAAAGGACTCTAATCTTGATTTGCTCCCACATCATGCCTCAAGTG
TTTTGAAAAAATACCGATCCAGTATAAAATCCATGGTATTTGAGACCCAC
ACAAAAGATCTATTCACTACACCGAAAGGAGAGAAGTTGAAGAATGTTTC
CCAGTCACAGTTGGTCGAAATTAAGCCGTCAAAGGAACGAGATTTGACCC
AGCTTTTTACTTTAACCTTTGAAAACGGAATATCTGAGGAAGCCATCGTT
GCCGAAAGCAAGTTTGCTGAGTTGCTATATACAAACGAGGCTGTTTATAC
TTCTTTTGGAAAGGAAGTCCGCATTGCCTTGGACGTTGCCCTCAGATCAG
GTGGCTGTGAAGCTATAGTCGAGGGTTTCTATAGCTTGGTCAAAAGAAAC
ATAAAAAGAACGGTCGTCAAAGAAATAAAACTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000234_pilon | genome | sc0000234_pilon:410059..412784 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1063-1818:757 |
| Aaloc | 721-1059:1607 |
| Aaloc | 298-720:2230 |
| Aaloc | 1-294:2727 |
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