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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:1171109..1173790+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_017109 ID=XLOC_017109|Name=XLOC_017109|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2682bp|location=Sequence derived from alignment at sc0000043_pilon:1171109..1173790+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTGATATCGAGCTGAAGTACGAAGGTCTTTCGAGAATATGCAGACC
ACAGCAAGTATCTGTGCAACGGTTGGCTGTGATGTTTAAAGTAAGTTGAC
TTATGCTATGCATGGCCTTGTATTGTTTGAAGTTCCTATTCAAAACGGAc
ttgaaaatttgagttttacaGAAGAAATACAGTTCGTTCAATGATCTGAT
ATCTAATTAATGTGCGAGAATTATATCTCAAGACGTGATAAGTTATGTTT
AATTTAGAAGTTGTTTCGGGAAGAATAACGTTTTACATTTTGTTTCACTT
CAGCTCGTCCCGGCCACCATATACGTAAGAGAAGAAAATGGTCTATCAGA
ATTTCCTAATAATGGAATTTTCGATTGCTTCGCAAATGCTCAGCCTCAAA
ATCCAAATGCTCAACGAAAAATTTATCTGGTTGAAGGAGAACGAGAACAA
GAAAATTCTAATGTAGTATCATCAACCACTGGCCCGTCGGCAGCAGTTCC
AGGCAATAGTTTTGCGTCGAACGGTGCATTTAGAAGATTATCGGCGACAA
GGTAAGCAGTCTTCTGAAAGGTTGATGGGGTAcaatatttcaatgaaaat
cttttcATTCGATAGATATAcattaataaaaagaaaacacaacatGTTTT
TTGTTATAGTTCCTATCAAGCTTCTCCGGATAGTGtttttttACTTGGGA
TTCTTGGTGagtcttttcaaaaaatgtcgcCATGAAATGACTACAAAATA
ACTTAAACTAAGCTGGCATTAAACTTTCATCAGTATTATTTCCTGgttga
tattttatatttttctatttgtttAGGAGAAGATCGTTACCACAACAACA
AGATCCACCGACCTATTCATTAAAAGTTATTTTGGCAGATCTAGATGGCA
AAAAGATTGGTAAGACTGCAAATTTTCTTTGCGTTCTTATTTGTTACGGC
TTTTCTTACAACCAGATTCCCTTTCTAAAAGTCATTTGTAAATCCGTAAG
TTTGTTGTTCACTTCCAGGGAAGTTTTTTACCAGCGAAAGGTGGTAACTT
CCCTGGGAAATTATATGAATTATCATTGTCTAAGGATTACAGATTCCCTG
ATAAAGTTTCTGTATATGTAAAGAATTCTTACACTATCGATTGAATATCG
ATATCGATTTGGAAGTTTTTCtattaaaaacaccttttttgcaaaatgta
tGGTTCTTGTCTTAAAAAACCTTGATTGCGATTTGATACgaataaaatct
tttgatatctatcatttttcgattttaggaatTCACAGGAGGATGCAATT
CTTTAATATTGACGAAGGTAGCGCTAACGTGACAGATATCACCGCAAAAT
GCAGAGATGGGTTTGGAAACGAAAATGTACTCCTCGTACAAGCTAATGGG
TTAAGAATCGAAGACAATGTTGTAACACAAAGTGAGTATATACTTAAAAT
GGATTTATTGCTGGATGACTAAGTTAAAGCAACGGTAAATAAGTACTTTT
TACTAATGAATACAAAATGTAAGTATCAAATTGTTCATGATCAAACATTT
ATGttgaaaacaagttttataaaataaacatttttctattgaaGCATTGG
CATTTTGGAAAAGTTCCGCACGAAAAGTCTATGCGGTGGACAAATCTTTC
ATTCAAGGAGTAACCCAGCAAATCGACAATGCACCAAGACTTGGTAAGTA
TAGTTGTTTTctaaagaaaaacacttttagGAAACGAGGGGCTCAGAATG
CGTAAAAACTAAGAAACTTCATCAGAATGAGACATTTTTCAATTcggttt
tttaagaacctttcattaaaaatttttttttctttgcatgaaaataaatt
tatatacaAGTACATAAGAcgtttctttttgaaaataaacactATAGGcc
ctttttttctttaagaataGTGCACTTTGAAGGATGAGGctcaaatattc
ttaacattctTACTATTTTAGACTAGACTGTATTACAGGCATTAGAAATC
TCATGTTGGCTTTTAAATGAACAATTGGAGCTAAAACTACTCCTGTCTCA
AAGTTTAAATTAaagtctaacaaaggaagcagttttttaaATGACTGTAT
TATCAAATTCTTTGAAACTGGTCCTAGAGAGTATTCTTAGGTTATTATTa
tgattttccaattttcaccctgacattcgtaaaaaaatattctcgtagaa
agaaaaagaaagaaacatgtttagaaacatttaacatttaaggctcaaaa
ggcctaTTTCTCatgaaacattgaggctgcttggtaaaactagtttctta
aaaaaacgtgtataggcatttttattttttaatcattacaGACATGATCA
TCGAAAAATTGGGACGATTAGAGTCGAAAGTTGAAAGATCGGTCGCTGTA
TCATGTCCAACATCGGAAGATGTCCAATCTCTCAAAAGTGTGATCCGATT
AGCAGAATTGTCAAGAATTGTCCAAGACACATACAGTTGCTTGATTTGTC
TAGATTTGATGACCTCACCCGTTGTTTTTGCAACTTGTTGTGTAAATCAT
GTAACGATCATTGGATCCCCAATACACGCCCTCATTGCCGTGCTCAAGAC
ACGAGACTTGTTGAAACCAGTTGCTTTAACGATATTTTGGCGTTTTTCCG
TGAAGAGTGATTACAGATCGGAATTTGTATGA Coding sequence (CDS) from alignment at sc0000043_pilon:1171109..1173790+ >XLOC_017109 ID=XLOC_017109|Name=XLOC_017109|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2028bp|location=Sequence derived from alignment at sc0000043_pilon:1171109..1173790+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTGATATCGAGCTGAAGTACGAAGGTCTTTCGAGAATATGCAGACC
ACAGCAAGTATCTGTGCAACGGTTGGCTGTGATGTTTAAAATGGTTGATA
TCGAGCTGAAGTACGAAGGTCTTTCGAGAATATGCAGACCACAGCAAGTA
TCTGTGCAACGGTTGGCTGTGATGTTTAAACTCGTCCCGGCCACCATATA
CGTAAGAGAAGAAAATGGTCTATCAGAATTTCCTAATAATGGAATTTTCG
ATTGCTTCGCAAATGCTCAGCCTCAAAATCCAAATGCTCAACGAAAAATT
TATCTGGTTGAAGGAGAACGAGAACAAGAAAATTCTAATGTAGTATCATC
AACCACTGGCCCGTCGGCAGCAGTTCCAGGCAATAGTTTTGCGTCGAACG
GTGCATTTAGAAGATTATCGGCGACAAGCTCGTCCCGGCCACCATATACG
TAAGAGAAGAAAATGGTCTATCAGAATTTCCTAATAATGGAATTTTCGAT
TGCTTCGCAAATGCTCAGCCTCAAAATCCAAATGCTCAACGAAAAATTTA
TCTGGTTGAAGGAGAACGAGAACAAGAAAATTCTAATGTAGTATCATCAA
CCACTGGCCCGTCGGCAGCAGTTCCAGGCAATAGTTTTGCGTCGAACGGT
GCATTTAGAAGATTATCGGCGACAAGGAGAAGATCGTTACCACAACAACA
AGATCCACCGACCTATTCATTAAAAGTTATTTTGGCAGATCTAGATGGCA
AAAAGATTGGAGAAGATCGTTACCACAACAACAAGATCCACCGACCTATT
CATTAAAAGTTATTTTGGCAGATCTAGATGGCAAAAAGATTGgaatTCAC
AGGAGGATGCAATTCTTTAATATTGACGAAGGTAGCGCTAACGTGACAGA
TATCACCGCAAAATGCAGAGATGGGTTTGGAAACGAAAATGTACTCCTCG
TACAAGCTAATGGGTTAAGAATCGAAGACAATGTTGTAACACAAAgaatT
CACAGGAGGATGCAATTCTTTAATATTGACGAAGGTAGCGCTAACGTGAC
AGATATCACCGCAAAATGCAGAGATGGGTTTGGAAACGAAAATGTACTCC
TCGTACAAGCTAATGGGTTAAGAATCGAAGACAATGTTGTAACACAAACA
TTGGCATTTTGGAAAAGTTCCGCACGAAAAGTCTATGCGGTGGACAAATC
TTTCATTCAAGGAGTAACCCAGCAAATCGACAATGCACCAAGACTTGCAT
TGGCATTTTGGAAAAGTTCCGCACGAAAAGTCTATGCGGTGGACAAATCT
TTCATTCAAGGAGTAACCCAGCAAATCGACAATGCACCAAGACTTGACAT
GATCATCGAAAAATTGGGACGATTAGAGTCGAAAGTTGAAAGATCGGTCG
CTGTATCATGTCCAACATCGGAAGATGTCCAATCTCTCAAAAGTGTGATC
CGATTAGCAGAATTGTCAAGAATTGTCCAAGACACATACAGTTGCTTGAT
TTGTCTAGATTTGATGACCTCACCCGTTGTTTTTGCAACTTGTTGTGTAA
ATCATGTAACGATCATTGGATCCCCAATACACGCCCTCATTGCCGTGCTC
AAGACACGAGACTTGTTGAAACCAGTTGCTTTAACGATATTTTGGCGTTT
TTCCGTGAAGAGTGATTACAGATCGGAATTTGTATGAACATGATCATCGA
AAAATTGGGACGATTAGAGTCGAAAGTTGAAAGATCGGTCGCTGTATCAT
GTCCAACATCGGAAGATGTCCAATCTCTCAAAAGTGTGATCCGATTAGCA
GAATTGTCAAGAATTGTCCAAGACACATACAGTTGCTTGATTTGTCTAGA
TTTGATGACCTCACCCGTTGTTTTTGCAACTTGTTGTGTAAATCATGTAA
CGATCATTGGATCCCCAATACACGCCCTCATTGCCGTGCTCAAGACACGA
GACTTGTTGAAACCAGTTGCTTTAACGATATTTTGGCGTTTTTCCGTGAA
GAGTGATTACAGATCGGAATTTGTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:1171109..1173790 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 676-1014:2344 |
| Aaloc | 577-672:1597 |
| Aaloc | 424-573:1281 |
| Aaloc | 340-420:828 |
| Aaloc | 91-336:304 |
| Aaloc | 1-90:1 |
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