XLOC_017047 (mRNA) -

Overview
NameXLOC_017047
Unique NameXLOC_017047
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000001_pilon:4124908..4125182-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_017047 ID=XLOC_017047|Name=XLOC_017047|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=275bp|location=Sequence derived from alignment at sc0000001_pilon:4124908..4125182- (Clytia hemisphaerica_ch_hm2_pilon)
GCCTTATCTTGGGGAAAAATTGATTTGTCAACACGATGACGTGAACCCTT
TCGATGTTTTTGCTATCAAAACCTTCTCTAGAAAATGGTCAAATTTACGG
ACATTTACCAATGGAGATATCACGTGCAACAAAATTTCTGATAGACAGAG
GTGCTCGAGTGCTCGTAGAAGTATCAGCAACTCATTATCGTCTTTCTCTG
CTTGTTCAAGATGGCCTTGAAATCCCTTGTAAATTATCGGTTAAATTAGC
CATTGCAACGGTCAAAAACAACACG

Coding sequence (CDS) from alignment at sc0000001_pilon:4124908..4125182-

>XLOC_017047 ID=XLOC_017047|Name=XLOC_017047|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=550bp|location=Sequence derived from alignment at sc0000001_pilon:4124908..4125182- (Clytia hemisphaerica_ch_hm2_pilon)
GCCTTATCTTGGGGAAAAATTGATTTGTCAACACGATGACGTGAACCCTT
TCGATGTTTTTGCTATCAAAACCTTCTCTAGAAAATGGTCAAATTTACGG
ACATTTACCAATGGAGATATCACGTGCAACAAAATTTCTGATAGACAGAG
GTGCTCGAGTGCTCGTAGAAGTATCAGCAACTCATTATCGTCTTTCTCTG
CTTGTTCAAGATGGCCTTGAAATCCCTTGTAAATTATCGGTTAAATTAGC
CATTGCAACGGTCAAAAACAACACGGCCTTATCTTGGGGAAAAATTGATT
TGTCAACACGATGACGTGAACCCTTTCGATGTTTTTGCTATCAAAACCTT
CTCTAGAAAATGGTCAAATTTACGGACATTTACCAATGGAGATATCACGT
GCAACAAAATTTCTGATAGACAGAGGTGCTCGAGTGCTCGTAGAAGTATC
AGCAACTCATTATCGTCTTTCTCTGCTTGTTCAAGATGGCCTTGAAATCC
CTTGTAAATTATCGGTTAAATTAGCCATTGCAACGGTCAAAAACAACACG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_017047XLOC_017047-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001_pilongenomesc0000001_pilon:4124908..4125182 -
Properties
Property NameValue
Aaloc238-321:85
Aaloc124-237:202
Aaloc64-120:260
Aaloc49-63:276