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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000023_pilon:1958148..1961242+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_016964 ID=XLOC_016964|Name=XLOC_016964|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3095bp|location=Sequence derived from alignment at sc0000023_pilon:1958148..1961242+ (Clytia hemisphaerica_ch_hm2_pilon)
atGTCAGAAGAAAACGCAAATTTAACACAGGAGTTATCACATCACAACGA
GCCTGCTATTTCAGCAAGGGAACCTCCTCAAAAGCAATCAATCCCTCAGG
GAATCTCTACCAACAATCAATCACAGGAATCACTTCAGGAATCATCAACT
GGTCAAGGTATCATCTCTACAAATTATCCAGTAATTACAAACATATCTCA
AATCAATCGAAGCCGTGTAACTAACACAGACGTCGTGGAGATTGAAGTTC
CGAGTAGTAACGAAACTGTTCAAATCAAATCGTACACATCGCTCAATAGT
CTTCCAGGGGCGTCCTACAGACCAACTCCTTCCAGTCAGTTTTCGACAAT
TGCTGAAAcagatcaacatcaaaacatgcCGAACCTTGAGCATTCATCCT
CGATACATTGCAACATGAATGAGAAGTCTAGAAGACCAACCACGTTACCT
CAAACCTCTGTGTAAGTAAATGCAAtcagctctctctaattcgaacttct
atttttCTCTGATTCGAAGAAAAgtatatacacgctttttttatataaga
atacagtTTATAAGAATGACCataatgaaaatggccaaaaatttaagaat
atggtaagaatatcaccatcatggaatttagcaactgaaactaagaatgc
cattttttaagcattttcatcAATAATAGCCCAGTAACGCTCAATATTCT
CCAGGCGTGTATTACATGGTAAAACCTAGGTTAATTTTCGATCTTTACCT
AAGAacaccgtaagaatattttaggatgatttttgacaaaaaattaagaa
tatccatgatgaaatgaaaatgcaccattcttataaaaaaagcgtgtact
tttTAGTTGTCTTGCCAACTAAAATAATACGAAGTTATAAAAGATAAAAG
GACTTTAAAGTCTGTCTAATCTAGcacacttttctttttataagaaccat
taaACTTTTGGCACTTGAGTCTCAAATTGTTATCATATTCTTATTTTATA
GGGTTTAATTGATGTATTTGAGGCTCTTTACTCAattcttttccattttg
accgctgaattgcttgaaattgattAATTCcgggctcagcattgttctta
aacccattgaccttttacatagttataatgtatgttgattcagcagattg
aaattAATAGAATgttttgtaatgaataaagaaaaatgtggagcaagatt
tttttcttccttttatttacaaatttggaaggactcttttattaaaattt
tgctgacatcagtttcagacgagtcgggtgtatataacaccgtataattc
ctttaatCTTTGAGCCTCATTTCTTTATAAAAGACTGTATTCCTTTGATC
CTGAATatgatttgaattattttctcttttcacTTAGGTACGACAACAAC
accaaacaaaatcaaatttatcaacaacagACACCAAACGACGGTAGTCC
AAACCAACAACCGCATCAAACGCACCAATTACGGTCGCCAATCTATACGG
AACAGTTATCGTTCCCTCAAACTCCTCAAATGAACACACAACGAAACTAT
CAGATGCCGCCCACTCCTACTACGCCGTTAACGCCAACGCCATTCATCAA
CAATGATGACGTAATCGCTAATTCGCCATATTACAATGACAAATACATGA
CGTCAGAGCTCGCGATGACCGCGCGGGCCTACGAGTTGCAACTACTGAGA
CATCAAGAACAGCTATATGAAGAGGCTTGCCAAATGAATCGAATCAAGTT
CTACAACGATTTTCAACAGCAAGGTTACGTGCCACCGAAATACGCGAACC
TTAACTCGCACTCAACCCCCAACACACATCTTCAGTCGCCAACCAGTTCG
TCCTCACAGCATACTTTTCATTACGGTGGCCAACGATCACCTTCGGTGGC
CCATCAACAAAAACTTCAACGTGCAATGGAGAAACAGAAGAAAACTCAAC
AACGCCAGCAACGAAAAAATAGATCTGTTTTAGATCCGTCGCATATTCAA
AACGGAATTGTTCCATCAACAACTCAAGGCCATCGTAACCAACAACAGCA
GAAAGAACACGAGAAATTATACATGGAAAGACTCGAGAAACAGCGTCAAG
AACAAATCAAACTCTACCATCGAATCcaataccaacaatatcaacaacat
cagagatatcttcaacaacaacaagtccaacacaacaattacaatcaaca
acctactcaacaaAATCCAGGGTCGCCCTCCACTTATCAGCCTCCAAACT
CGATGATGTTGTCACCACCTCTAACACCAACTCATCCAGCTAGCTATCAA
CCAGCGTTCCAGACTGACAACTATCACCAGAGTGTACCATCACCTTCTGT
AAACAGACATCATCCATATTCTCCAGCGGCCTCAAGCAGTACCAGATCTG
ACCAGATCTCACACCGCCCTCAATTTCAATGTCAGTCATATCCAACGCCA
ACAACCGAATTGGAGAATTCCTCTTTCGATTTCAGCCATTTATCACCTAC
AACTCAATACGAAATGAAAAGAATCTCAAGACATAACGTCATCTCTAAAC
TCCGTCACATTCAAGAagtcaaacaacaaaaacaacttcACCAAGAAAAA
ATGGAACGTCTTGATCGACTCGATCGCGCCCTTCGCTTTCAAGAGGAAAA
ACAATTACGTCAAATTACTCCCAACGCCCTTAATCAACACCCTGCGGACA
CTCTAACAGCTTTCCAACTAGCTTCGCCTGATAGTGGGCGTGGTAGCATT
GAAGACTTGAACGATTGTAAAGCATCAGACGAAAACAATAATGAAATAGA
CTTCCATTTTGAAACGAATTCGGCCCCACTTCTGGATGTCGATAAAACAG
GCCCCGTGGATCCAACAAATGCATGTCCGGGAATCAAACTGGCAGATCAG
AAATGTTTAATCAAGCCAGCAGGTAATAGATGTCATACGAAATTACAAGC
TTGGAGGTCGCGCATGGATGACGAGGCGACCGAAGGGGCTGGGGACGAGT
CAAACGAAAATACCGGCATGGGTGAGAAAATAAACACTCGTGATAACCCT
TATCTTGACGCTCCGTCACCCGGCAATTTGGTTATTGATGAATGA Coding sequence (CDS) from alignment at sc0000023_pilon:1958148..1961242+ >XLOC_016964 ID=XLOC_016964|Name=XLOC_016964|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4338bp|location=Sequence derived from alignment at sc0000023_pilon:1958148..1961242+ (Clytia hemisphaerica_ch_hm2_pilon)
atGTCAGAAGAAAACGCAAATTTAACACAGGAGTTATCACATCACAACGA
GCCTGCTATTTCAGCAAGGGAACCTCCTCAAAAGCAATCAATCCCTCAGG
GAATCTCTACCAACAATCAATCACAGGAATCACTTCAGGAATCATCAACT
GGTCAAGGTATCATCTCTACAAATTATCCAGTAATTACAAACATATCTCA
AATCAATCGAAGCCGTGTAACTAACACAGACGTCGTGGAGATTGAAGTTC
CGAGTAGTAACGAAACTGTTCAAATCAAATCGTACACATCGCTCAATAGT
CTTCCAGGGGCGTCCTACAGACCAACTCCTTCCAGTCAGTTTTCGACAAT
TGCTGAAAcagatcaacatcaaaacatgcCGAACCTTGAGCATTCATCCT
CGATACATTGCAACATGAATGAGAAGTCTAGAAGACCAACCACGTTACCT
CAAACCTCTGTatGTCAGAAGAAAACGCAAATTTAACACAGGAGTTATCA
CATCACAACGAGCCTGCTATTTCAGCAAGGGAACCTCCTCAAAAGCAATC
AATCCCTCAGGGAATCTCTACCAACAATCAATCACAGGAATCACTTCAGG
AATCATCAACTGGTCAAGGTATCATCTCTACAAATTATCCAGTAATTACA
AACATATCTCAAATCAATCGAAGCCGTGTAACTAACACAGACGTCGTGGA
GATTGAAGTTCCGAGTAGTAACGAAACTGTTCAAATCAAATCGTACACAT
CGCTCAATAGTCTTCCAGGGGCGTCCTACAGACCAACTCCTTCCAGTCAG
TTTTCGACAATTGCTGAAAcagatcaacatcaaaacatgcCGAACCTTGA
GCATTCATCCTCGATACATTGCAACATGAATGAGAAGTCTAGAAGACCAA
CCACGTTACCTCAAACCTCTGTGTACGACAACAACaccaaacaaaatcaa
atttatcaacaacagACACCAAACGACGGTAGTCCAAACCAACAACCGCA
TCAAACGCACCAATTACGGTCGCCAATCTATACGGAACAGTTATCGTTCC
CTCAAACTCCTCAAATGAACACACAACGAAACTATCAGATGCCGCCCACT
CCTACTACGCCGTTAACGCCAACGCCATTCATCAACAATGATGACGTAAT
CGCTAATTCGCCATATTACAATGACAAATACATGACGTCAGAGCTCGCGA
TGACCGCGCGGGCCTACGAGTTGCAACTACTGAGACATCAAGAACAGCTA
TATGAAGAGGCTTGCCAAATGAATCGAATCAAGTTCTACAACGATTTTCA
ACAGCAAGGTTACGTGCCACCGAAATACGCGAACCTTAACTCGCACTCAA
CCCCCAACACACATCTTCAGTCGCCAACCAGTTCGTCCTCACAGCATACT
TTTCATTACGGTGGCCAACGATCACCTTCGGTGGCCCATCAACAAAAACT
TCAACGTGCAATGGAGAAACAGAAGAAAACTCAACAACGCCAGCAACGAA
AAAATAGATCTGTTTTAGATCCGTCGCATATTCAAAACGGAATTGTTCCA
TCAACAACTCAAGGCCATCGTAACCAACAACAGCAGAAAGAACACGAGAA
ATTATACATGGAAAGACTCGAGAAACAGCGTCAAGAACAAATCAAACTCT
ACCATCGAATCcaataccaacaatatcaacaacatcagagatatcttcaa
caacaacaagtccaacacaacaattacaatcaacaacctactcaacaaAA
TCCAGGGTCGCCCTCCACTTATCAGCCTCCAAACTCGATGATGTTGTCAC
CACCTCTAACACCAACTCATCCAGCTAGCTATCAACCAGCGTTCCAGACT
GACAACTATCACCAGAGTGTACCATCACCTTCTGTAAACAGACATCATCC
ATATTCTCCAGCGGCCTCAAGCAGTACCAGATCTGACCAGATCTCACACC
GCCCTCAATTTCAATGTCAGTCATATCCAACGCCAACAACCGAATTGGAG
AATTCCTCTTTCGATTTCAGCCATTTATCACCTACAACTCAATACGAAAT
GAAAAGAATCTCAAGACATAACGTCATCTCTAAACTCCGTCACATTCAAG
AagtcaaacaacaaaaacaacttcACCAAGAAAAAATGGAACGTCTTGAT
CGACTCGATCGCGCCCTTCGCTTTCAAGAGGAAAAACAATTACGTCAAAT
TACTCCCAACGCCCTTAATCAACACCCTGCGGACACTCTAACAGCTTTCC
AACTAGCTTCGCCTGATAGTGGGCGTGGTAGCATTGAAGACTTGAACGAT
TGTAAAGCATCAGACGAAAACAATAATGAAATAGACTTCCATTTTGAAAC
GAATTCGGCCCCACTTCTGGATGTCGATAAAACAGGCCCCGTGGATCCAA
CAAATGCATGTCCGGGAATCAAACTGGCAGATCAGAAATGTTTAATCAAG
CCAGCAGGTAATAGATGTCATACGAAATTACAAGCTTGGAGGTCGCGCAT
GGATGACGAGGCGACCGAAGGGGCTGGGGACGAGTCAAACGAAAATACCG
GCATGGGTGAGAAAATAAACACTCGTGATAACCCTTATCTTGACGCTCCG
TCACCCGGCAATTTGGTTATTGATGAATGAGTACGACAACAACaccaaac
aaaatcaaatttatcaacaacagACACCAAACGACGGTAGTCCAAACCAA
CAACCGCATCAAACGCACCAATTACGGTCGCCAATCTATACGGAACAGTT
ATCGTTCCCTCAAACTCCTCAAATGAACACACAACGAAACTATCAGATGC
CGCCCACTCCTACTACGCCGTTAACGCCAACGCCATTCATCAACAATGAT
GACGTAATCGCTAATTCGCCATATTACAATGACAAATACATGACGTCAGA
GCTCGCGATGACCGCGCGGGCCTACGAGTTGCAACTACTGAGACATCAAG
AACAGCTATATGAAGAGGCTTGCCAAATGAATCGAATCAAGTTCTACAAC
GATTTTCAACAGCAAGGTTACGTGCCACCGAAATACGCGAACCTTAACTC
GCACTCAACCCCCAACACACATCTTCAGTCGCCAACCAGTTCGTCCTCAC
AGCATACTTTTCATTACGGTGGCCAACGATCACCTTCGGTGGCCCATCAA
CAAAAACTTCAACGTGCAATGGAGAAACAGAAGAAAACTCAACAACGCCA
GCAACGAAAAAATAGATCTGTTTTAGATCCGTCGCATATTCAAAACGGAA
TTGTTCCATCAACAACTCAAGGCCATCGTAACCAACAACAGCAGAAAGAA
CACGAGAAATTATACATGGAAAGACTCGAGAAACAGCGTCAAGAACAAAT
CAAACTCTACCATCGAATCcaataccaacaatatcaacaacatcagagat
atcttcaacaacaacaagtccaacacaacaattacaatcaacaacctact
caacaaAATCCAGGGTCGCCCTCCACTTATCAGCCTCCAAACTCGATGAT
GTTGTCACCACCTCTAACACCAACTCATCCAGCTAGCTATCAACCAGCGT
TCCAGACTGACAACTATCACCAGAGTGTACCATCACCTTCTGTAAACAGA
CATCATCCATATTCTCCAGCGGCCTCAAGCAGTACCAGATCTGACCAGAT
CTCACACCGCCCTCAATTTCAATGTCAGTCATATCCAACGCCAACAACCG
AATTGGAGAATTCCTCTTTCGATTTCAGCCATTTATCACCTACAACTCAA
TACGAAATGAAAAGAATCTCAAGACATAACGTCATCTCTAAACTCCGTCA
CATTCAAGAagtcaaacaacaaaaacaacttcACCAAGAAAAAATGGAAC
GTCTTGATCGACTCGATCGCGCCCTTCGCTTTCAAGAGGAAAAACAATTA
CGTCAAATTACTCCCAACGCCCTTAATCAACACCCTGCGGACACTCTAAC
AGCTTTCCAACTAGCTTCGCCTGATAGTGGGCGTGGTAGCATTGAAGACT
TGAACGATTGTAAAGCATCAGACGAAAACAATAATGAAATAGACTTCCAT
TTTGAAACGAATTCGGCCCCACTTCTGGATGTCGATAAAACAGGCCCCGT
GGATCCAACAAATGCATGTCCGGGAATCAAACTGGCAGATCAGAAATGTT
TAATCAAGCCAGCAGGTAATAGATGTCATACGAAATTACAAGCTTGGAGG
TCGCGCATGGATGACGAGGCGACCGAAGGGGCTGGGGACGAGTCAAACGA
AAATACCGGCATGGGTGAGAAAATAAACACTCGTGATAACCCTTATCTTG
ACGCTCCGTCACCCGGCAATTTGGTTATTGATGAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023_pilon | genome | sc0000023_pilon:1958148..1961242 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 463-2169:1389 |
| Aaloc | 1-459:1 |
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