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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000543_pilon:96070..97133- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_016890 ID=XLOC_016890|Name=XLOC_016890|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1064bp|location=Sequence derived from alignment at sc0000543_pilon:96070..97133- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAATCGTCGATGATGCGGAGTATAAAAATGCTTTACATTCTTGTTG
GAGCATAGAGACAGATTTCGCGAAGTGGTTCCCTGATGAAATTGCCGAGT
GGATCCAATATCAGTCAACAATACTTGGTGTCGCACAACCGTATTTATCT
ATTCCGTTGTTGGTGGCCGTATCGTATTGCAGTCATCAATGCTCCGTAAC
GGCAGGTGCTAATCATACCGAACCCCTTATATTGTATGGACTGGTTGTGG
GACGTTCCGGAACGAACAAATCAGCAGCCCTTCATAAAATTCTGGATATT
GTGAAATCGATCGAAGTATCTGAAAGCCATACATTTGAATCCGGCACCAT
GGAGGGCCTCCTGGTGGCGATGAGAGAAAATGAAGAATCCATATTGGCAG
TGTACGACGAATTCAGTTCGTTTTACGACAGCTTAGACAAAGGAACTGCC
GGAAAGTGTGAAAAATCTAGATTTCTAACTTTGTATAATGGAAAACCCTG
GTCGAAGAAAACCAAGACAAACGGTACAATGGAAATTGATTCACCACGTT
ACAACATGCTTGCTTTTACACAACCCTCGTATGCTGTACAGTTCGCAAAA
ACGAACACATCTGATGGGTTCTATCAGAGATTTTTATTGAGTGTACCGAA
AGAGAGATTTGTGAAATTCAATGATAAGCGGGAATGTTTGAACAACAAGA
AAGAACTATTGGATTTGGAATCTGTTATCAAAAGGATTTATGAGGCTGCC
GAAACAAAATGGAGTTGGAGTTTACTGATGCGGCCAACAGGATTTATGAA
CAGTTACACGATGAAGTAATCGAATACCGCCAAAAGGACGAATTTGAGGA
GGCAAAATCAAGCATTAAGAGTAAGTCTATTGGCTTATTTTTGAGAATTT
CTGGTCTAATCTTCTTGATGAGAAAATGTTTAAGTGACGATCCTGGATTT
GGAGAATCAAATAAAATAGAGGCAGCTGATGCTCTAATGTCTTTACAAAT
CGTAAATTGTTCCGTGCAAAACGCATTCTGCTTAGTCCCACCCAAATTCG
AACAATCAGATGTC Coding sequence (CDS) from alignment at sc0000543_pilon:96070..97133- >XLOC_016890 ID=XLOC_016890|Name=XLOC_016890|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2128bp|location=Sequence derived from alignment at sc0000543_pilon:96070..97133- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAATCGTCGATGATGCGGAGTATAAAAATGCTTTACATTCTTGTTG
GAGCATAGAGACAGATTTCGCGAAGTGGTTCCCTGATGAAATTGCCGAGT
GGATCCAATATCAGTCAACAATACTTGGTGTCGCACAACCGTATTTATCT
ATTCCGTTGTTGGTGGCCGTATCGTATTGCAGTCATCAATGCTCCGTAAC
GGCAGGTGCTAATCATACCGAACCCCTTATATTGTATGGACTGGTTGTGG
GACGTTCCGGAACGAACAAATCAGCAGCCCTTCATAAAATTCTGGATATT
GTGAAATCGATCGAAGTATCTGAAAGCCATACATTTGAATCCGGCACCAT
GGAGGGCCTCCTGGTGGCGATGAGAGAAAATGAAGAATCCATATTGGCAG
TGTACGACGAATTCAGTTCGTTTTACGACAGCTTAGACAAAGGAACTGCC
GGAAAGTGTGAAAAATCTAGATTTCTAACTTTGTATAATGGAAAACCCTG
GTCGAAGAAAACCAAGACAAACGGTACAATGGAAATTGATTCACCACGTT
ACAACATGCTTGCTTTTACACAACCCTCGTATGCTGTACAGTTCGCAAAA
ACGAACACATCTGATGGGTTCTATCAGAGATTTTTATTGAGTGTACCGAA
AGAGAGATTTGTGAAATTCAATGATAAGCGGGAATGTTTGAACAACAAGA
AAGAACTATTGGATTTGGAATCTGTTATCAAAAGGATTTATGAGGCTGCC
GAAACAAAATGGAGTTGGAGTTTACTGATGCGGCCAACAGGATTTATGAA
CAGTTACACGATGAAGTAATCGAATACCGCCAAAAGGACGAATTTGAGGA
GGCAAAATCAAGCATTAAGAGTAAGTCTATTGGCTTATTTTTGAGAATTT
CTGGTCTAATCTTCTTGATGAGAAAATGTTTAAGTGACGATCCTGGATTT
GGAGAATCAAATAAAATAGAGGCAGCTGATGCTCTAATGTCTTTACAAAT
CGTAAATTGTTCCGTGCAAAACGCATTCTGCTTAGTCCCACCCAAATTCG
AACAATCAGATGTCATGTCAATCGTCGATGATGCGGAGTATAAAAATGCT
TTACATTCTTGTTGGAGCATAGAGACAGATTTCGCGAAGTGGTTCCCTGA
TGAAATTGCCGAGTGGATCCAATATCAGTCAACAATACTTGGTGTCGCAC
AACCGTATTTATCTATTCCGTTGTTGGTGGCCGTATCGTATTGCAGTCAT
CAATGCTCCGTAACGGCAGGTGCTAATCATACCGAACCCCTTATATTGTA
TGGACTGGTTGTGGGACGTTCCGGAACGAACAAATCAGCAGCCCTTCATA
AAATTCTGGATATTGTGAAATCGATCGAAGTATCTGAAAGCCATACATTT
GAATCCGGCACCATGGAGGGCCTCCTGGTGGCGATGAGAGAAAATGAAGA
ATCCATATTGGCAGTGTACGACGAATTCAGTTCGTTTTACGACAGCTTAG
ACAAAGGAACTGCCGGAAAGTGTGAAAAATCTAGATTTCTAACTTTGTAT
AATGGAAAACCCTGGTCGAAGAAAACCAAGACAAACGGTACAATGGAAAT
TGATTCACCACGTTACAACATGCTTGCTTTTACACAACCCTCGTATGCTG
TACAGTTCGCAAAAACGAACACATCTGATGGGTTCTATCAGAGATTTTTA
TTGAGTGTACCGAAAGAGAGATTTGTGAAATTCAATGATAAGCGGGAATG
TTTGAACAACAAGAAAGAACTATTGGATTTGGAATCTGTTATCAAAAGGA
TTTATGAGGCTGCCGAAACAAAATGGAGTTGGAGTTTACTGATGCGGCCA
ACAGGATTTATGAACAGTTACACGATGAAGTAATCGAATACCGCCAAAAG
GACGAATTTGAGGAGGCAAAATCAAGCATTAAGAGTAAGTCTATTGGCTT
ATTTTTGAGAATTTCTGGTCTAATCTTCTTGATGAGAAAATGTTTAAGTG
ACGATCCTGGATTTGGAGAATCAAATAAAATAGAGGCAGCTGATGCTCTA
ATGTCTTTACAAATCGTAAATTGTTCCGTGCAAAACGCATTCTGCTTAGT
CCCACCCAAATTCGAACAATCAGATGTC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000543_pilon | genome | sc0000543_pilon:96070..97133 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 748-1065:319 |
| Aaloc | 1-744:1065 |
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