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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000319_pilon:164903..167783+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_016744 ID=XLOC_016744|Name=XLOC_016744|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2881bp|location=Sequence derived from alignment at sc0000319_pilon:164903..167783+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATGAAGACTCTGTTTTGAAATTGGACCAAGCTGATTTAAACGAGCT
GCTACCTGGAAATGAAAACTTCCTTATTAGGAAAAGGATCCTCAGCATCA
TATCTGGATTCAAAAATTCAGACGTAAGTCAACTTTACCTCAATCGGATC
ATAATAAGATATGATTGGACAAATTTTGCCATGTGTCACCAGAATATTTC
ATTACTCTTTGGCTACTGATTGGGAGAGGGTCAAATTATTGGGGAAATTG
GGGAAAAGCTATAcatatatattattttataagcaactccatttTTGGGG
TCAGACCTGGAGTTGTTAAGGATTTTTCGCAATCAAGGCCCAAAGTTGCT
TGTAGGGTTAAAATTGTCAAGCTTAAAATGGGTGAAaagcacattttttt
tatttttcaacgaatttttttatctttaaaatgaACAAACAAAACAGTAG
AGGCACCTTTTTGAAGATTTGCAATGCTTTCTTTTAAAGCTGGTAAAGCT
ATTTTCTATCACTGAGGAATAAAGTTGCGACTTTCTTGAGGCCTTTTTTG
AGGCCTCATGGTTACTAAGCAAGTTgcttatttttaagaaattttgaggc
ctgagcccttagCAAATGTGTAAATGGTTAGtttttacagttttttcttt
ttcaatttgattACCAGGACCGAAGAAGTGAGAGATCGACGCCCTCATCA
GCGCTGTCAACCGAAAGTTTCTCAACACCCTCATCACTACCAGTATCACA
TATTTTTTCTGTACCGTCACCCCACGAGTTGAACAACACGCCTGATCTTG
ATAAAACACCAAAGTAAACAAAATCAATTCTTTCCCTACCAAGGTTCCTT
CTCCACCTTCTCCAACCTTTGTCATGTACAAGGATCCAATCCTGCAGCAA
TACACAGAGAAGAAGAGCAAGGAAGTAACAATTCCCGAATCGGTTGTTTC
CACTTTAGTGAGAGGAACTATTTCTAATATGGTTACCGGGTGCCAAGGTG
TACCTGGAAGGGATTACCCACATTCTCATGAAATCATAGCTGTCGCCAAA
CACTTAACTGATATATATCCCTGTTTGGAACGAATAAAACCTAATGGCAA
ACCAACGAAGGtatccatttttcttttatcataaCGTACCACTCTCATCT
CAAGTCTTAAGTCAAACCTTAGGATAAGTGAAATCTTTTCTAGTTTACTC
TTGAGTACATAATGGGGCTGCAACAAAATGTCGTGGATggaaaaatctag
aaaaacaggctggtacataaaaataaaaggaattttccacaaaaaaaatt
tccgtctTAAAAGAACCTGAAAGAATACAGATCCTTCATTGAAATGCGCT
CATGGCTTTAGTGAGCTTAGTACGCCTTACTACTTTCTACTCACATTGAG
GGTGTATTTTTGGCAAAGCTTCAGAAACGATTGAGAAACGTCAAACTGGT
CAAAAATCCACAAGGCAAAATTCCTCAACGCTCCAAGCTCTACAAGAAAG
AGAATGGTCAACTTGACTCGGacaaaatagacgaacgaaaaaatcagcaa
catcaacagcagcaacaaaaccacaaaaccacaaaTTTACGAACACAAGT
ACCTGCACAAAAGTCACTCAATTTTGAAGATAATGACGAAGAACTCTTTC
AacatgtacaaaatattgtCCAGATCACCCAGACCGACTCAGATGCATTA
GATAGATATTCTGTGTACTTGGATCGAGAATTGGAAAGCTCAAAACCGGA
TGACGAAACACTGACCCGTTATTGTGATTTACTGTTTGAGTCCCGCAGAG
AAACGATCTTGGGAGTAAATTATGAGCGATGGATGTCGCTGATAAAATCA
AACCATAAAGTTTTAGTGCAGCAACCGATGCAGGTAGGGTTTCCTAATAG
ATTTAATAATTACTCACAATTCAAGAATTAAAGTTTTACTTTATACGATT
TAGCATgaaacgatttttgaaaatttgtaaattattCCTGGACTATTCTT
CCTATCATACACATACAGCAGGTATGCTTTCAGGAGTCAACTAGAGACGG
TTCCTTTCCAAGAAATGAGTGAGTCTGAAATTCACAAAGATATAAAACAA
GGACTTTCCATAATTTACCACATAATATTCAATCCAATGTCatccatttt
atttttagttaatcATAGAGGTGGGGCGCATTTTTcatcaagaaacaaaa
atgtttACACAAGAGGTCATCAAAAGGCTCTCAGTACTAACCGATTCGCT
CCTCCCCTACGTATATACGAAGTTCAACACCAACAAATCGCTAATCGAAA
CATTGCATAATCCAAACTTCAATATTTCATGTAAGTATTTCTGACTTTGT
TGCTTTGTCACCGTGAACTGGGTTTTAAAGGGTATTTCTGAAAACTTAAG
GGTCTTATTCGAAAATTAGTTCTGCCTCCTTGCTTTTTGTTAATGAATTT
ATTTCGATTATTTCTAGGGACCAAGCTGGTATCTATCCTTTCCGTCATCG
ATGTTCTATTTGAtgggaagaaaaagaagaaatctaTCGTTCAACTGATC
CATGTAAGTATATTTTCAATTCCGtcacaaaacatttttatcgAAATTAT
GCATAGGGAAAGAACAATATACAAACGAAAACAGTGTATGGAAAATATTT
ACATTAATTCTTCTCTGATCATACCTGTTTGCTCATGCTCTCCGAATAGG
ATGTTTCCGATAGGATGGTGAATGAGTGCTTTGACCTTTTTGCGTATACG
TTCATAAAATGCCTTGATGATATATACTATTCTATTATCTGTCGTATCCA
TTTTTACAGGACGAGGATGACCCCAACATTAAACGAAAACTACTGTTGCC
AGAGTTACCGGGCCTCGTATGCAATATAGAA Coding sequence (CDS) from alignment at sc0000319_pilon:164903..167783+ >XLOC_016744 ID=XLOC_016744|Name=XLOC_016744|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2758bp|location=Sequence derived from alignment at sc0000319_pilon:164903..167783+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATGAAGACTCTGTTTTGAAATTGGACCAAGCTGATTTAAACGAGCT
GCTACCTGGAAATGAAAACTTCCTTATTAGGAAAAGGATCCTCAGCATCA
TATCTGGATTCAAAAATTCAGACATGGATGAAGACTCTGTTTTGAAATTG
GACCAAGCTGATTTAAACGAGCTGCTACCTGGAAATGAAAACTTCCTTAT
TAGGAAAAGGATCCTCAGCATCATATCTGGATTCAAAAATTCAGACGACC
GAAGAAGTGAGAGATCGACGCCCTCATCAGCGCTGTCAACCGAAAGTTTC
TCAACACCCTCATCACTACCAGTATCACATATTTTTTCTGTACCGTCACC
CCACGAGTTGAACAACACGCCTGATCTTGATAAAACACCAAAGTAAACAA
AATCAATTCTTTCCCTACCAAGGTTCCTTCTCCACCTTCTCCAACCTTTG
TCATGTACAAGGATCCAATCCTGCAGCAATACACAGAGAAGAAGAGCAAG
GAAGTAACAATTCCCGAATCGGTTGTTTCCACTTTAGTGAGAGGAACTAT
TTCTAATATGGTTACCGGGTGCCAAGGTGTACCTGGAAGGGATTACCCAC
ATTCTCATGAAATCATAGCTGTCGCCAAACACTTAACTGATATATATCCC
TGTTTGGAACGAATAAAACCTAATGGCAAACCAACGAAGGACCGAAGAAG
TGAGAGATCGACGCCCTCATCAGCGCTGTCAACCGAAAGTTTCTCAACAC
CCTCATCACTACCAGTATCACATATTTTTTCTGTACCGTCACCCCACGAG
TTGAACAACACGCCTGATCTTGATAAAACACCAAAGTAAACAAAATCAAT
TCTTTCCCTACCAAGGTTCCTTCTCCACCTTCTCCAACCTTTGTCATGTA
CAAGGATCCAATCCTGCAGCAATACACAGAGAAGAAGAGCAAGGAAGTAA
CAATTCCCGAATCGGTTGTTTCCACTTTAGTGAGAGGAACTATTTCTAAT
ATGGTTACCGGGTGCCAAGGTGTACCTGGAAGGGATTACCCACATTCTCA
TGAAATCATAGCTGTCGCCAAACACTTAACTGATATATATCCCTGTTTGG
AACGAATAAAACCTAATGGCAAACCAACGAAGGGTGTATTTTTGGCAAAG
CTTCAGAAACGATTGAGAAACGTCAAACTGGTCAAAAATCCACAAGGCAA
AATTCCTCAACGCTCCAAGCTCTACAAGAAAGAGAATGGTCAACTTGACT
CGGacaaaatagacgaacgaaaaaatcagcaacatcaacagcagcaacaa
aaccacaaaaccacaaaTTTACGAACACAAGTACCTGCACAAAAGTCACT
CAATTTTGAAGATAATGACGAAGAACTCTTTCAacatgtacaaaatattg
tCCAGATCACCCAGACCGACTCAGATGCATTAGATAGATATTCTGTGTAC
TTGGATCGAGAATTGGAAAGCTCAAAACCGGATGACGAAACACTGACCCG
TTATTGTGATTTACTGTTTGAGTCCCGCAGAGAAACGATCTTGGGAGTAA
ATTATGAGCGATGGATGTCGCTGATAAAATCAAACCATAAAGTTTTAGTG
CAGCAACCGATGCAGGGTGTATTTTTGGCAAAGCTTCAGAAACGATTGAG
AAACGTCAAACTGGTCAAAAATCCACAAGGCAAAATTCCTCAACGCTCCA
AGCTCTACAAGAAAGAGAATGGTCAACTTGACTCGGacaaaatagacgaa
cgaaaaaatcagcaacatcaacagcagcaacaaaaccacaaaaccacaaa
TTTACGAACACAAGTACCTGCACAAAAGTCACTCAATTTTGAAGATAATG
ACGAAGAACTCTTTCAacatgtacaaaatattgtCCAGATCACCCAGACC
GACTCAGATGCATTAGATAGATATTCTGTGTACTTGGATCGAGAATTGGA
AAGCTCAAAACCGGATGACGAAACACTGACCCGTTATTGTGATTTACTGT
TTGAGTCCCGCAGAGAAACGATCTTGGGAGTAAATTATGAGCGATGGATG
TCGCTGATAAAATCAAACCATAAAGTTTTAGTGCAGCAACCGATGCAGtt
aatcATAGAGGTGGGGCGCATTTTTcatcaagaaacaaaaatgtttACAC
AAGAGGTCATCAAAAGGCTCTCAGTACTAACCGATTCGCTCCTCCCCTAC
GTATATACGAAGTTCAACACCAACAAATCGCTAATCGAAACATTGCATAA
TCCAAACTTCAATATTTCATttaatcATAGAGGTGGGGCGCATTTTTcat
caagaaacaaaaatgtttACACAAGAGGTCATCAAAAGGCTCTCAGTACT
AACCGATTCGCTCCTCCCCTACGTATATACGAAGTTCAACACCAACAAAT
CGCTAATCGAAACATTGCATAATCCAAACTTCAATATTTCATGGACCAAG
CTGGTATCTATCCTTTCCGTCATCGATGTTCTATTTGAtgggaagaaaaa
gaagaaatctaTCGTTCAACTGATCCATGGACCAAGCTGGTATCTATCCT
TTCCGTCATCGATGTTCTATTTGAtgggaagaaaaagaagaaatctaTCG
TTCAACTGATCCATGACGAGGATGACCCCAACATTAAACGAAAACTACTG
TTGCCAGAGTTACCGGGCCTCGTATGCAATATAGAAGACGAGGATGACCC
CAACATTAAACGAAAACTACTGTTGCCAGAGTTACCGGGCCTCGTATGCA
ATATAGAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000319_pilon | genome | sc0000319_pilon:164903..167783 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1306-1377:2810 |
| Aaloc | 1222-1305:2470 |
| Aaloc | 1048-1218:2159 |
| Aaloc | 565-1047:1401 |
| Aaloc | 283-564:829 |
| Aaloc | 124-282:668 |
| Aaloc | 1-123:1 |
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