|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000063_pilon:1559580..1563644+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_016638 ID=XLOC_016638|Name=XLOC_016638|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4065bp|location=Sequence derived from alignment at sc0000063_pilon:1559580..1563644+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTCAACCATTACCAGAACAACAATGTGTGTGACTTAGATTCCATAGC
CGTCCATGACATCGAGTTTGATCTTCACCACAATTCAAACAATGGACCAT
ATACTCAATTCACTTATGGAGATTATTTACAGGAGTTGCAGAATCTGGAA
GAAGGTTGGACTTTTCACATTTCCTCTTTGTATAAGTCTTGTGTTGAATC
AAATAAGCAGACGTTTTCTATTACAACCCTGTCTCGTAGCtccggtgaaa
ttttttttattatacccctgtctcatagctCCGATGGATTTCTTTCTATT
ATACACCCCTGTTTTACAGTCTTGATGGAATCCCCCCTGTCTCGTGgtaa
atttctattgaaatccccaTGGGGGCTAGAATGCCTATTGTTCCAAgttc
agaaaattcagtggggatggttttggagtgtaatttcTTCCTTTGAATTT
AGTACGAggatgaaatgaaagtcaatttcaCACTGGGAGTCAAATTATAG
CATATCTTTCTCATcggacacaaaattttgacccaaTTTTCGACTAAAGT
CCTTTTCGTGAAGTTGGAGGCACGAGCTCTGTCTTTTTACTAGCACCTAA
CGTTTAGACGTTGTAAACATTTGAGAAACGTGGAAACAACGTTGGGAGCT
AGCTGAAAGGGTTAACCTCTGATTTGCTAGGATCTCAGAAGACAAATGTA
TTTAAATAGAATCTTTTAAACGTCCATCATtttcagattaaaaaaatgag
acaCAGATGTTAAAAATCAGCTGTTTTGTGGATAACATTTAGATTTCATT
CAAAtcatcattatttttcaatagGACGAACACCAATGAAAATCGACCGC
CAATCCATTCCGCGCGACCTCTCTAACCTACATTACGTGCACAATGTGGG
TTTACCGATTGATCAGCAACCACAACAAGCGCCCGCGCGACAACCGACAA
TCTCGCTTATGGTTGATCCTAACACAAACATGCCCGTTCAATTTTCAACT
AATCGTGGTGGTATTCAAGCCCTACCCATCACCTTCATGCCCATCTCACA
ATCACAGGTCTTGCAACAGCACCAGCAAAACCTGTTCCAACAAAGCCGGC
AAAACGAGCTGTCTCAGCAACAAATTCAGCAGACCCAACAACAGACTACG
ATTTCTCAACAACAGAAATACTCAACGAATCACCATGATAAAACAAAGGA
GCAAATCggacaaaatggtcaaaaaatattcccaaaacCCGTCTTTTCGT
ATTCGTGTTTAATAGCGATGGCTCTTAGACATAGCGAGCAAGGAAGTCTT
CCGGTCAGCGAAATATACAAATACATGCAGTAAGTTTCTTATATATAAAC
CTTATCTCGATCGTATCGTAAGAAGATTCGATGAATATGTATTCATGGAG
AGAGTTTGAACACATTCATGGAAAGTTGTCTCCTTTTCTTGATTTAGTAT
CTGAAATCTCTACTTTCTTGCTCTACACCATAAGAACATCCACCTCAACA
ATTATTTTTACTTCTGTTTAACTCTCTTTTTCACCCTTGCATCCTTGGTC
TTATaagttcaattcaattcaattcaaaacatatatttacaCTAAGGAAG
GGACACCAAGTTTAGAAACCTTATAAAATTACAAATGGTGCAACCTAAAG
TGTCAGGAATACTGAGCCTGTGAACATCATAGGGTCGGGACGGACACGTT
TAAGAATCTAACGGgattaaaatgttttcaaaggTACCATTTCTTATGTA
GGtagaaaatccgtcaaaaacaatactttcaaaatttttgaatgaatttg
CAAGAATAATACCATAAAGGTGTattattcgaaaatattttttattacaa
tgAATGGACTGAATGTGAACAGGTGCTTCAtgttcagttgatgacgtcat
caattggACCGTTACATATCAtatgatgaaaatatttttgtcgtTCTATT
GATTTATTATTGATGGCAATAACAAGTGAAATTCGGacagtattttttgt
ttttcacatAACAGTGTTGTATGGCCGAGCGTTGTAATATTTGAAttcag
aacatttttgaaaaaaaaatcaaaacaaagtttaaaaaaaaatagaaaga
aaataatcaaaaataaatttaaaaaaaataaatatttttgaaaaaaatta
aaaaaacaatgaaaaaaattttggaataaaaataaatgtatgGATACGAA
AAGTTCTAAAGTGCTGATTAGGATTGGACAAATGTCGTAGCTTTTTGTGG
GAATGAGAAAATATCTACAAAATAGATTCAATTAAAACAATTACAGTCTA
TTCACTTTGGTAGAatatattacacgtttttttttttattagaacgtctT
AATTTTAGCTGAGGCTGGATGTGCCtattttctcatcaattttcagcctg
aaTGTTCTTATTGACGTTCTTGAAATCGATTCGCTTAAAATCTAATAAAA
CCTTTGAATGTCGATATTGGGTTAAAAATCGAGTAAATTTGCTATTATTT
TTAGATGAGAGGAATAATTACAGTAATAATTGCACAAAATTCCTTAAGAA
ATCTAAAGATTTTTAAGCGAATTTCGACAAACTATTCGATTCTCAGGCTG
GACATGTTCTTATAATGTTCTTAAATTTTTGCCAAATTTCAGCCTAAATG
TTCTTACAAACTGGGTTCTAATAAAAAAAAAACGTGTAAGAAAAGACAGG
AGATGTCAAAATTTGAATCCACATTTCAAGGAATGCAGTAAAATCTTGGC
TACCATCCATCTGAAATTTTCTTTTGTCTTTGAACAAAACTTGTAAACGC
CAAGGTACTCGAATCCCTCGAACTAACTTCTGTCTTTTTCGAATAAAGAA
ACAAAACAAGTGCACATATTTTGATGCATTGACAATACCAAATTCTTATA
TATtattaacacccctgtctcatttaaCCTTTTCTTCTCAGAAAGGAAAG
CACTTGCAATTCATCAAAGCTTTTAAACTATATATACCTACATAAAACAT
TTATCTAAAAAACCTATCAGATAGGTATTTTCAATATATTACCTTTTCCA
GACTTTCGAGACGCAGAGTGGAGGCCCCTATTTAACCAATTTTTCatttg
gaggggggggggtcgttACCCATCAGCTCTTACTATGGAAAACATAGAAT
AAATCACTTAAAAGAACTCATCACATCaatctgttttttattttttttgc
aatgtgAGACAAGCATTAACTGCTTTTTCACCTTTTAAATCGGAGCAAGT
TTGCTTTGTGGTGGTGGAAATATTGCGAAGTATAGCCTAAAGAGCAATAG
AAACCATGATGGCCCCGAGGTTGGATTATCTTTATgtcttttctttctct
ttcagATCACGCTTTCCTTACTTCAAGACGGCACCAGATGGATGGAAGGT
ATGAAAAAAGGCTATCATACATTCTCTCCCCTTTTCTCACAACCCCATAG
CGAGCAGGGATAAAAATCTTTATAGAATTTCCAATGGGGGTAgagattct
aaaaaaaacaatgaagaaGTTTTATTACGTGTTATTCCTATcctaacaaa
atctttttttttgtctcTGTGTCTTATgtctcgatgtagaaattttcctc
TGGCTTGGTAAGGCCATAATATTCGGGAAAAATCTGGAAAGTTTGGATTT
TATAACGAAATTAATGAAAGGTCTCCTGTCCTGAGATCTGGGATCCAAAT
AAAAGTCATTTGAGGAAGGACACTATTTGTGCAGCCTACAAACTTTACAA
TTCTAAAGCAGAGTGCTTACAAaatattatttcattttacCACATTCCCA
CCAATAGAATTCCGTTCGTCACAACTTATCATTGAACAAAGCGTTCTGTA
AATTAGAGCGTCCGGATGGAACTTCGCAGCGGAAGGGATGTTTGTGGTCA
TTGAAGCCGGAAAAGAAGGATCAGCTGCGGAGGGAAATCCGGAAGTGGAA
GAAGAAACATCCGGAAGCCATCAAAGCAAGCATGGCTAACCCTGGTAAGT
TTTATATCAGACTCGTGTCCTTTATTTTGATAGTGATGACAATCAATCTC
ATGTCTCATAAATAA Coding sequence (CDS) from alignment at sc0000063_pilon:1559580..1563644+ >XLOC_016638 ID=XLOC_016638|Name=XLOC_016638|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1920bp|location=Sequence derived from alignment at sc0000063_pilon:1559580..1563644+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTCAACCATTACCAGAACAACAATGTGTGTGACTTAGATTCCATAGC
CGTCCATGACATCGAGTTTGATCTTCACCACAATTCAAACAATGGACCAT
ATACTCAATTCACTTATGGAGATTATTTACAGGAGTTGCAGAATCTGGAA
GAAGATGTTCAACCATTACCAGAACAACAATGTGTGTGACTTAGATTCCA
TAGCCGTCCATGACATCGAGTTTGATCTTCACCACAATTCAAACAATGGA
CCATATACTCAATTCACTTATGGAGATTATTTACAGGAGTTGCAGAATCT
GGAAGAAGGACGAACACCAATGAAAATCGACCGCCAATCCATTCCGCGCG
ACCTCTCTAACCTACATTACGTGCACAATGTGGGTTTACCGATTGATCAG
CAACCACAACAAGCGCCCGCGCGACAACCGACAATCTCGCTTATGGTTGA
TCCTAACACAAACATGCCCGTTCAATTTTCAACTAATCGTGGTGGTATTC
AAGCCCTACCCATCACCTTCATGCCCATCTCACAATCACAGGTCTTGCAA
CAGCACCAGCAAAACCTGTTCCAACAAAGCCGGCAAAACGAGCTGTCTCA
GCAACAAATTCAGCAGACCCAACAACAGACTACGATTTCTCAACAACAGA
AATACTCAACGAATCACCATGATAAAACAAAGGAGCAAATCggacaaaat
ggtcaaaaaatattcccaaaacCCGTCTTTTCGTATTCGTGTTTAATAGC
GATGGCTCTTAGACATAGCGAGCAAGGAAGTCTTCCGGTCAGCGAAATAT
ACAAATACATGCAGACGAACACCAATGAAAATCGACCGCCAATCCATTCC
GCGCGACCTCTCTAACCTACATTACGTGCACAATGTGGGTTTACCGATTG
ATCAGCAACCACAACAAGCGCCCGCGCGACAACCGACAATCTCGCTTATG
GTTGATCCTAACACAAACATGCCCGTTCAATTTTCAACTAATCGTGGTGG
TATTCAAGCCCTACCCATCACCTTCATGCCCATCTCACAATCACAGGTCT
TGCAACAGCACCAGCAAAACCTGTTCCAACAAAGCCGGCAAAACGAGCTG
TCTCAGCAACAAATTCAGCAGACCCAACAACAGACTACGATTTCTCAACA
ACAGAAATACTCAACGAATCACCATGATAAAACAAAGGAGCAAATCggac
aaaatggtcaaaaaatattcccaaaacCCGTCTTTTCGTATTCGTGTTTA
ATAGCGATGGCTCTTAGACATAGCGAGCAAGGAAGTCTTCCGGTCAGCGA
AATATACAAATACATGCAATCACGCTTTCCTTACTTCAAGACGGCACCAG
ATGGATGGAAGATCACGCTTTCCTTACTTCAAGACGGCACCAGATGGATG
GAAGAATTCCGTTCGTCACAACTTATCATTGAACAAAGCGTTCTGTAAAT
TAGAGCGTCCGGATGGAACTTCGCAGCGGAAGGGATGTTTGTGGTCATTG
AAGCCGGAAAAGAAGGATCAGCTGCGGAGGGAAATCCGGAAGTGGAAGAA
GAAACATCCGGAAGCCATCAAAGCAAGCATGGCTAACCCTGGTAAGTTTT
ATATCAGACTCGTGTCCTTTATTTTGATAGTGATGACAATCAATCTCATG
TCTCATAAATAAAATTCCGTTCGTCACAACTTATCATTGAACAAAGCGTT
CTGTAAATTAGAGCGTCCGGATGGAACTTCGCAGCGGAAGGGATGTTTGT
GGTCATTGAAGCCGGAAAAGAAGGATCAGCTGCGGAGGGAAATCCGGAAG
TGGAAGAAGAAACATCCGGAAGCCATCAAAGCAAGCATGGCTAACCCTGG
TAAGTTTTATATCAGACTCGTGTCCTTTATTTTGATAGTGATGACAATCA
ATCTCATGTCTCATAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000063_pilon | genome | sc0000063_pilon:1559580..1563644 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 703-960:3808 |
| Aaloc | 661-702:3357 |
| Aaloc | 157-657:827 |
| Aaloc | 1-153:1 |
|
