XLOC_016635 (mRNA) -

Overview
NameXLOC_016635
Unique NameXLOC_016635
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000063_pilon:1533971..1535299+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_016635 ID=XLOC_016635|Name=XLOC_016635|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1329bp|location=Sequence derived from alignment at sc0000063_pilon:1533971..1535299+ (Clytia hemisphaerica_ch_hm2_pilon)
GTGGATATCTCAGTGGAATTTCACACAAGTTACCATGGTGATCGGTATAT GTTCGATGGAAATGGCGGCAAATTAGCACATGCATTTTATCCCAACAAAA AGCTTGGTAAGAGCTCGTCTTTAAAGTATTTAAAATCCTTGTTATTGTTG ggtgaaattttgataatataattttatcCAGTGAGGCTCAGGGGATGTGA ACAGAAAGCATATCGCTTTCACAGTATGGGctaattatttttcatattca GCCTCTATTTTTGCTTGTTTACGATTCTAATGTTTTAGAGAAAGTTGCCA TGGGGATGATGGCGATGTTGCTTAAAATTCAGTTAAATGATTGAAATCAT GCATTTAGCCTTTGGTGTCGTAACTttagaaatgtttttattttcaagga aTCTCTGGTGACATTCATCTTGATGATGACGAAATATGGAAAGTGCCTGG TGGTAAAAATGAACATGTGTCTAGAGCCAAAAGTTTGTTATGGGTCTTGA CGCACGAGATTGGTCATTCACTGGGATTGAAGCATTCAAAGAACCGTGCA GCCATTATGCATCCTTGGTATCGAGGAAATAAAGAGGTTGGATTACATCA TGATGACATCATTGGTGTTCAAAGTCTCTATGGTGAGTTAACCAAGGGTG AAAAGTCTTTTGAATATAAACTCAAGCTTGGATTGCTTTTTGAAAGATTC CTTTTATCAGCTAGTTCCTTGGGTTGATTAGGACGCAtttttttCCTCAA TcctcatttttcaaatatagttTATTCAAACTACACGCTTTTCTATAAAA ATGGTGCTTTCCGTTTCACCATGGATATTCTTGACTTTTTGGGGAATATA ATTCTGAAATATTATGTGAGATTTCTTACCATTGCTGGGGATTAGACGTA CTGATACAATGCTTTAAACGATATTCTTAGACTTAGTTTCCAAATTCAAT GTTCATcgtattcttagcatattcttaatctTTTGGCCAATTTTATCATG ACTAAAAGTATAAAAGtatatttttcttaaatattcttataaaaatgtgc aCTTAGAATAGCACAAATATTTTCTCAATGTTAACAGGACCACGTAACTC TTCAATCATCTTGAAGCGCCCAACCTCCCCACCACCCAGTTGCCCTAACA AATTCAAAGCAGTTTTACTTCACAAGGAGACTGGGAATACATACGTCATC AATGATGGTCACGTGTACGTGCTCGGGAGACGGTTGGGTATCGATCGTGG TCCGTTCCCTGTTGGGGAGATCTTCGAAGGAATTTCACACGTGGATTCTT TGTATTATGATAACAAAGGAAAGATTGTA

Coding sequence (CDS) from alignment at sc0000063_pilon:1533971..1535299+

>XLOC_016635 ID=XLOC_016635|Name=XLOC_016635|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1164bp|location=Sequence derived from alignment at sc0000063_pilon:1533971..1535299+ (Clytia hemisphaerica_ch_hm2_pilon)
GTGGATATCTCAGTGGAATTTCACACAAGTTACCATGGTGATCGGTATAT
GTTCGATGGAAATGGCGGCAAATTAGCACATGCATTTTATCCCAACAAAA
AGCTTGGTGGATATCTCAGTGGAATTTCACACAAGTTACCATGGTGATCG
GTATATGTTCGATGGAAATGGCGGCAAATTAGCACATGCATTTTATCCCA
ACAAAAAGCTTGgaaTCTCTGGTGACATTCATCTTGATGATGACGAAATA
TGGAAAGTGCCTGGTGGTAAAAATGAACATGTGTCTAGAGCCAAAAGTTT
GTTATGGGTCTTGACGCACGAGATTGGTCATTCACTGGGATTGAAGCATT
CAAAGAACCGTGCAGCCATTATGCATCCTTGGTATCGAGGAAATAAAGAG
GTTGGATTACATCATGATGACATCATTGGTGTTCAAAGTCTCTATGgaaT
CTCTGGTGACATTCATCTTGATGATGACGAAATATGGAAAGTGCCTGGTG
GTAAAAATGAACATGTGTCTAGAGCCAAAAGTTTGTTATGGGTCTTGACG
CACGAGATTGGTCATTCACTGGGATTGAAGCATTCAAAGAACCGTGCAGC
CATTATGCATCCTTGGTATCGAGGAAATAAAGAGGTTGGATTACATCATG
ATGACATCATTGGTGTTCAAAGTCTCTATGGACCACGTAACTCTTCAATC
ATCTTGAAGCGCCCAACCTCCCCACCACCCAGTTGCCCTAACAAATTCAA
AGCAGTTTTACTTCACAAGGAGACTGGGAATACATACGTCATCAATGATG
GTCACGTGTACGTGCTCGGGAGACGGTTGGGTATCGATCGTGGTCCGTTC
CCTGTTGGGGAGATCTTCGAAGGAATTTCACACGTGGATTCTTTGTATTA
TGATAACAAAGGAAAGATTGTAGACCACGTAACTCTTCAATCATCTTGAA
GCGCCCAACCTCCCCACCACCCAGTTGCCCTAACAAATTCAAAGCAGTTT
TACTTCACAAGGAGACTGGGAATACATACGTCATCAATGATGGTCACGTG
TACGTGCTCGGGAGACGGTTGGGTATCGATCGTGGTCCGTTCCCTGTTGG
GGAGATCTTCGAAGGAATTTCACACGTGGATTCTTTGTATTATGATAACA
AAGGAAAGATTGTA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_016635XLOC_016635-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000063_pilongenomesc0000063_pilon:1533971..1535299 +
Properties
Property NameValue
Aaloc343-582:1090
Aaloc109-339:401
Aaloc1-105:1