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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000063_pilon:1504539..1512361+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_016632 ID=XLOC_016632|Name=XLOC_016632|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7823bp|location=Sequence derived from alignment at sc0000063_pilon:1504539..1512361+ (Clytia hemisphaerica_ch_hm2_pilon) ATGGCGGGCGTTCCTTCTTGTCTCTCAATCCACGGTAACGGTGCTCACGT
CGAAGAGCATGATGATATCATCGGTCGAAGCGTCAGgtattcagtttttt
ttgttttaaatcaactacaaatatacagttgacactctctaattcgacct
tcccttattcgataagctcccttattcaatgaaactccaattccccttga
agatcgaattagagagcgttaacTGTACTTTATTCAATCAAAGACTCAAT
GTCTGGAAAAGAAGAAACAAACCTTTTCTTTTAGCCAGTTATGGTGGTAT
TTTAAGAGCGTAAATCATTTACAACCATGTCTAACCCAAAAAACGTTAAT
TTGTTGATTCAGAGAGATTGCATACGAGAGAGTTGGAGGACGTCGTATCA
TAACCAGAGCTGATCCACAACGAAGTGGAATCACTTACACTTACAATGGT
ACTATCGATAAACATCGTCCTGAAGGGATATATCCAACCTGTTACCGTAT
CGTCACTGCGTAAGGCTCTTTTTACTCTTGTGATACTTTTCTGTCTCGCT
TAAAAGGAAGAAAGAAATCCCAGTTAGGGCAATAAGCTAACGAAGAAAAT
TCCAGGTTTTCTAATTCAACGTTTCCCCTCGTTTATATGACGTATTTCCT
CCGAAAAACGCCGCCAGGATCTTAGGTAAAATGTTCGTTAGAGGTCTGCG
TTCATAAAGGATTGCTATATTTAAATGGTGGCCGTTTGGGAGTTTTAAAC
GACACCACAAATATTGCAAACAAACATTCGAATaggcttttccaaaaaag
attttacccccactgttgaggctattgatttttcgaagtgtttagccccc
tggatatcctctcttataaagatgcttacccctggatatcgtatttttta
cttgaaaagacaactttaccccctggatatccgcccccttgtagatattt
aaccccctggatatccacttttgaacaaaaattgttaacCCCCTTGGATA
TCTGATATCTTCaacacggactatttctggaaaagcccaatatagATAAG
ACCTGATCAATTCGCAATGATTATGCTTGTATACACAAACTGAGAAGAGT
CCCTTTCTTCTTTATAGAGATCCCGAAAACAACTACATATATTCCAAACA
AGTTTGCACACAAGTCTCAACTCTTAAAGGTAGGTTTCCATTGACAGTTT
GAAAGGTAAGGTTTAGTTTATAGTAGCAACGGCATACTTTAAGACGACtt
tttttCCACTGGGACGTCTACTTATGTTGCACttatattacacgtttttt
tttgaaGTAATTTTCATATAAGCGTTCAAGGCCTATTTTTCTCGTCCAAA
GGTAACAAAAATTTCGAATTGTTGCCCATTGTAGTGAATTAGTTTTGAAA
TGTTTCCTTATCATATTTTCGGCAGATGGTTTTGCTTTGAAGACAGAATA
CAACTACCCAAAACACGGGGGTAAAGCAATGGTTGATGACGTCAAAACTT
TGAATGTAGTCGTGCATGGAGCTGTAAGTTGTTGGTTCATTCAACGAATA
ACTAATTTAGAAAATTGCAACTCTTTATTAAACATGACAACCTGGTTAAA
TTGATCGAAATTAAAAAGAACTTAAACAAATTTATTCAAGAAGAAAGGCA
GATATTTTTCACGAGGAATCTCCTCACTAGATCCCATACTATCAGCTGCA
GAAAACCTGTCGTTATTccgaatacaccttttcaaccgtagccgccAGTT
GCCGTGCGGGTATTTTTTGTTTcgccaccctaaactcgatccaatccttt
ttttgacacatttttctattgtctatagatgcaaaaaaggactgggatgg
ttttagggtggtaaaacggagcAAATAGTGTCGAAaaggttgaaaaggtg
tattatctTCCCATACTAATGAACTTCCACATTGGGAAATAAATTCATTG
GCTAACAACACCACGGTTTTCAAATCATCGAGCTCAAATCCGGAAGGGCT
AAAAGTGAAATCTCTTTCGTGGAAAATAAAGCCACATAAAATTCATTGTC
ATAGTCTGTGTCAGATTCGTAGCAACCGTAGTGGTAGAAGGTTGTGggtt
cataccaaagatttccaaatggtacttggtgcctctctgcttgatgctca
tgCAGCAATTAAGACAAgagtcaagggtaagtggagcaatccagggagaa
agagtggcgccctcccctaccttcaagtagataactatcaaaagaggagc
ctccgggccgcctccgactgcggtcgcagactatGTCACATTTAAAATAT
ATGTAaggtgaaaacaaacaaaaggcTAGATCCAATCCGTCATTCTGAAT
ACGGTGCAAATTTTAAGGTGGTAATATATCTTGCGATTATTGTCTTTCTT
TCAGATGAAGGAACCAACAACGTTCAGTGTCGCCATCTTGGAATATGAAA
CAGACAGATCAGTTTATTCTTTCGATTACAACGAACGTAACATAAAAGAA
CATTACAAAACGGAAAACGATCCTATAAAATTGTTCATCACAAATATCAC
CATCACTCTCCCCTACATGACGTCATTGGTGGCTAATCGAAAGTATTACG
TCATCTTTAACAAGTATCCCTACGCACTACCAGGGTGTAAAGATCACCAA
CGAGATTCACCAATGAACAAAGATGAATGGACATTCACTACTGAAAGTAA
GaccttttcacttttctttctGATATCTTACtaattcataatatgcacca
ttacaatgtcttccacagacacaacagctgattggttgaaagtgacgtat
tgactgattttacgtcacttacaaccaatcagctattgggtccatgatat
aatgtcagaagacattgcatccATATCATGAATAACTAGAAGCAGATTTG
GTGCCAGATGTGGAGCtttttttttCCTACATACACCACCAGATCCGAAG
GTGAGGAAAGTGTTAATATTTTGAAGGTGTGAATAATGGAATTCAGCCAG
GACACCATTAGAATTTTTGAGGATGCCTACCTATGAAgcaaaaaagaagt
aaatttcaaattttcaaatgaacaTATAAAGAACATTGATAAACCAatca
attcttgatatgcgtaagtcaagatgacgtcatattttcaaCGGAAACGC
CCaaaaaaaagccggattttgacctccgtgtttctatttttagtagcAGA
GAGGGGTCACATCCCGGatttttttgggtgtttccgcttgaaaaatgact
tacgcatatcaagaattcaaAACACgtgagatgtttttttttctttcagc
gGTGTCGAACAACCCACCCATGCCCATCGATGGCGGAGAGATAAAGCATG
AAACAGAGTTGATGTGTAAACACGATTCTTTTAGCTTCACTTTCAAACAA
CTTCACAATTCCACGTATGTTGTCTcgttcagttttttttttcaatttga
tacaacacccctgtgtcacagacccgctgggaccccagcaccattggaaa
atttggcaaaaaattcgTCACCATTGGGAGAACACCCTGAAATTCCACCC
CCACTGagaaatttactttgatttcatccctatccgaaattcaatgttta
aaaatgacACTCCAAAACTATTCCCACTGGAATTTGTGaccttagaacaa
tagaatttctatccccattggaatttcaataggaatttttatcttcAGTG
AGGTAAAATTTCCACCGGGGCTAGGAGACAGGGGTGTGCTATAATTTTGA
ACTGTAACTTTTGATGTGTTTATACCGTTTTTTGACGTTTACACAAGGCT
CACAAAGTTCATGTAACGCTCGATGAACGCTGAAACACAGCTTGTTTGTG
GCAGCTGGATTCTCTCTCTTATGAagaagacacccccttctcacagacgc
TGTTGgatcccttcccactggaaaaatgcccaaaaaatcgtccccagtgg
aaaattatactgcGAATATTGGCTctatttaaaatattcaaataaactaa
tcctcactgcaaaatattatatgCTATGTTTTGTATCCCCACTGAACTTg
gtgacttgaaaacaatggaatctAAATATCCACATCGAGTTTCGGTCCGt
tattttacccccactggctgagaAAATCCTACCGTTTCTGTAAGAATGGG
GTGTAAGAAGTGCCACTAAGAGTGGTTTCGTTACCCCAGTGCAACTTGTG
AGCGCTgttagaatcataaaaaaaaacaaacgagGGGTCTGTGTATGAGT
TTTGTTACTGGTATTCTGGGTGGCAAGTTACTGGGAGTAGAGAGTTGTGT
GACGCTCCATCTCAGCATTTGATGTAAAATGTCTAGCGCAAAtggaaaag
gggatagactccctcactctcTCACTCTatgctccgccgacagccaccag
atgaatatagttatttactttactttttatcaatttacaGAATGCCAATC
AAAAAAGTGACTTTGTTGAAGGATGATTGCGAGATGAGATACGATCGAAT
GAGCAACATATACGACGCCTTGAACATCATGTTCACGAAGTGCGGCACAC
AAATGAGTGAAGACGAACATCACATTGTCTTCAGCAATATCGCACGTGTC
TATTACACTAATAGAACGACCTCCAATTCACTCATCACCCGAACCAAAAC
CATGAATATCAAGTAAGCTTTTTTATGACATCGCCTGTGCGCCTGAGATT
AGATTGttattgttttctgcacaccacgcggATCTCTAAAGAGATGTATG
AAAACCACTGACCTTTGTATATCCCTTGACCAAGTCACTCAATGCTGGCC
aaacaaaatattatgatcagagtttttttgaaattggtacccacGGTGAG
AGCGCTAGATTAGTTTCGTTTGTACACTAATGATGTAGCACCGTTTGTCT
Ttaaggcaaagtttcaaaccctacaatagcttctttgcgggtaccaactt
TTAAAagaacttcgatcaaagatggcggatatagcttggtccagggatat
ataaaactcagtaatgaaaataaaccaTTTCTCAGGAGTAGGAATGAACA
CGGAGTTGCGTAACGACAATTGAAATAGAGCGATGTATATTGGAAACAAG
ATAAAGTTTTAACATCCCGCTTGAAACAAGATTTTTGTAATAGAAGTCAC
TATTATACTCAGATAGTtcattttcaagcgcctttataggtttaccgtgc
acgtaagaaagtTGTTGCAATCTGTTATCAGAATACCATTTTCTAGATCC
TATCGGACTTCTTTTACTTCAGTCGGCAGGGATTTTAAGCTTAAATATAT
TCAATTGATTCGGGAACAGGCttatatatttcaatttttttaaaaattta
aaaacacacTACTGCCAGTTTCACATTTAATGCGAACATCAGGTATAAAA
ATTCTCTGTACAATATGGTATAAATACTTATTCTACAGGGTGtccagaaa
aaaagtaaatgaagacttttacgaagaaaagtttttgaactttgaagagc
ttattctttctttcatttatGTAGACTTGAGTGTCGTTTACCAAAGACAC
AAATCAACACGTTAAGAGGAAAACCAACCAGGAATGCAACGGACGGAGGA
GACGGTTCTGGACCTGAGGGAATCGTTGTTGGTCCACAGTTTATCGAAAT
TCACGACACTGCACGTATGTCCATCTCCTTCTTTCTATGAagtgttttat
aagaaaattcatcccagctggcacacaacgttgtatcatctaacgttata
tggacgttgtgaacgcatctaacgttatatggacgttatatggacgttag
ataaacgttgaaacaacgttgtgtgccagctgggtaaagCTTAGAACCTA
TTACTGCACCTCCGTGTAGTCTCCTTCCTGTTGTTTTCTCCCTTTGAGTC
TTTCCTCGTGTGAGTCTCTCACAtcaaaagtctttgaaaaagTTGTCCAA
TTTCTCACCGGACAGAATCAACTTCCAAACAGGATAACTTACGAACTTGA
ATTTGAAAGCcataaaaagagaaatatttcaTTCTGACTGGCAAAAACTT
CCACCAGATCATTGAGACAGGGTGGTATTCTTAGGTGTCCAATGAATACC
CCAACTGCTtataaattttcgattttcggggATATTTATATCTGACAAGT
AAATACTCCTCGCTTATTAAGCACGTGAGAGTAAGTTTgtaaaacgataa
aaatattttgtacaattattaTTAGGATCAAACGCTTCATTCCGCATCGA
TTTCCAAGTTTACAAATCACTCCAATACGGTCACTCATACGGCAGAGAAG
AGTTTCCAATCTATTTGGCTGTCAGTAACAGAATCTACTTCGAAGTTAGC
ATcgataaaaaagatttaagcATCTTACCAAGAACCTGTTATGCTACCAA
AACACAGAGTTACCAAGATGAACAGAGATATCATTTGATCCAAGATAGGT
AGATACCCTGATTTGAACCTCTACATTATGATAACTGGCATCTCATGAAA
GAGGATGCCTGAGTCTGTATTGAGTGGTCTAAGAATTGTCTCCTTTTTAA
TCGTCTAAACTGTAGTTTATAGTACCTACAAGCTTGtttttttGATCAAG
TGCGTTAATCCGACGTGAACCACTAGGGAACAAGGCTAGCGCATTTCCAC
CACGATGTAGTGTGAAATCAATGACTAGCACAGTAACTGATAATACTTGA
GTTTCTGTCCACCCAATTCCTAATACACACAAGATGGATAGGCGAACTTG
TTTGTTTCTCGATATTGGGAGTAGTCTAAAGCTTTGGCTGATAGGAAAAC
ACTTCAGTTTGAATTTAGTTCTTACAGTCCGAGTCAAAGCTGACTCTTTT
AGTTTAGCTAACCGttgcataaaaatattttctttcctcTCGACCACAGT
TGTCCTAAAGACCAGACGTACGTCATGCACAATGACAACATCGCTAAAAA
CAAATTCCGCTTCAGCGTCCAAGCATTCAACTTCAAAGATGGCGGAGATA
GTATTTTCGTACACTGTCATACGTATGTATGCAAAAATCAAACGGATGAA
CAATGTCAATTCGGCTGCCATAACAATGGAAAACGGTCTCGCAGAAGCAT
CGAGTTGAAAGAAGAGGTTGAAGGCTACATGACCTCTACACTAGAAATCA
AAATCAAGGGTAAGTTATACATAGTAACTACCCTTTTATAATTTCAACTA
GGTTAAAGCATGGTATAAGAAAGCCGTatggttaaaggttttatttttaa
ataagtgtTTCCGAATTCATATTAGatacatattttatatcaggacagtg
tctgtctattgttatattatgcagatataagcaaaaaatatttttctttt
cctctttctgactaatcttgctccactccaaatgtgaaaaagctcgtaat
taaaattgatgagtaagcaaacgatatcactcttatttaaaaacaaaaac
cttaaACTCGACTCTATTCAAATCTTGATTAAAATAAGCCAAGTCTTTCC
TTGCCTTGCTTCTTTAAGCAATTTTGAAGGGCAAAAGTATTTTCACAATC
ACTTTACCAACACGATTCCtttattcaaaacatttttgttcTAATCACCT
AGGCGACAAGATTGCAGTTATCCACAACAGATCATCCAGTGATGATGAGA
CAACAGACGATCAAAGCAAGACTATGTTGTTGTACCTTCAAATCCCTGTG
GCCATCGCTGTCTTCGGTCTCCTTTTCTTCGCTTACAAATGTCTCCAAAA
GAGAAATGCTTCTTCAAATGGTGGTGTCTTCTTTGAAGAAGAAATGaagt
tgaagaaaaatgaaatgctGTAA Coding sequence (CDS) from alignment at sc0000063_pilon:1504539..1512361+ >XLOC_016632 ID=XLOC_016632|Name=XLOC_016632|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3732bp|location=Sequence derived from alignment at sc0000063_pilon:1504539..1512361+ (Clytia hemisphaerica_ch_hm2_pilon) ATGGCGGGCGTTCCTTCTTGTCTCTCAATCCACGGTAACGGTGCTCACGT CGAAGAGCATGATGATATCATCGGTCGAAGCGTCAGATGGCGGGCGTTCC TTCTTGTCTCTCAATCCACGGTAACGGTGCTCACGTCGAAGAGCATGATG ATATCATCGGTCGAAGCGTCAGAGAGATTGCATACGAGAGAGTTGGAGGA CGTCGTATCATAACCAGAGCTGATCCACAACGAAGTGGAATCACTTACAC TTACAATGGTACTATCGATAAACATCGTCCTGAAGGGATATATCCAACCT GTTACCGTATCGTCACTGCAGAGATTGCATACGAGAGAGTTGGAGGACGT CGTATCATAACCAGAGCTGATCCACAACGAAGTGGAATCACTTACACTTA CAATGGTACTATCGATAAACATCGTCCTGAAGGGATATATCCAACCTGTT ACCGTATCGTCACTGCAGATCCCGAAAACAACTACATATATTCCAAACAA GTTTGCACACAAGTCTCAACTCTTAAAGAGATCCCGAAAACAACTACATA TATTCCAAACAAGTTTGCACACAAGTCTCAACTCTTAAAGATGGTTTTGC TTTGAAGACAGAATACAACTACCCAAAACACGGGGGTAAAGCAATGGTTG ATGACGTCAAAACTTTGAATGTAGTCGTGCATGGAGCTATGGTTTTGCTT TGAAGACAGAATACAACTACCCAAAACACGGGGGTAAAGCAATGGTTGAT GACGTCAAAACTTTGAATGTAGTCGTGCATGGAGCTATGAAGGAACCAAC AACGTTCAGTGTCGCCATCTTGGAATATGAAACAGACAGATCAGTTTATT CTTTCGATTACAACGAACGTAACATAAAAGAACATTACAAAACGGAAAAC GATCCTATAAAATTGTTCATCACAAATATCACCATCACTCTCCCCTACAT GACGTCATTGGTGGCTAATCGAAAGTATTACGTCATCTTTAACAAGTATC CCTACGCACTACCAGGGTGTAAAGATCACCAACGAGATTCACCAATGAAC AAAGATGAATGGACATTCACTACTGAAAATGAAGGAACCAACAACGTTCA GTGTCGCCATCTTGGAATATGAAACAGACAGATCAGTTTATTCTTTCGAT TACAACGAACGTAACATAAAAGAACATTACAAAACGGAAAACGATCCTAT AAAATTGTTCATCACAAATATCACCATCACTCTCCCCTACATGACGTCAT TGGTGGCTAATCGAAAGTATTACGTCATCTTTAACAAGTATCCCTACGCA CTACCAGGGTGTAAAGATCACCAACGAGATTCACCAATGAACAAAGATGA ATGGACATTCACTACTGAAAcgGTGTCGAACAACCCACCCATGCCCATCG ATGGCGGAGAGATAAAGCATGAAACAGAGTTGATGTGTAAACACGATTCT TTTAGCTTCACTTTCAAACAACTTCACAATTCCACcgGTGTCGAACAACC CACCCATGCCCATCGATGGCGGAGAGATAAAGCATGAAACAGAGTTGATG TGTAAACACGATTCTTTTAGCTTCACTTTCAAACAACTTCACAATTCCAC AATGCCAATCAAAAAAGTGACTTTGTTGAAGGATGATTGCGAGATGAGAT ACGATCGAATGAGCAACATATACGACGCCTTGAACATCATGTTCACGAAG TGCGGCACACAAATGAGTGAAGACGAACATCACATTGTCTTCAGCAATAT CGCACGTGTCTATTACACTAATAGAACGACCTCCAATTCACTCATCACCC GAACCAAAACCATGAATATCAAAATGCCAATCAAAAAAGTGACTTTGTTG AAGGATGATTGCGAGATGAGATACGATCGAATGAGCAACATATACGACGC CTTGAACATCATGTTCACGAAGTGCGGCACACAAATGAGTGAAGACGAAC ATCACATTGTCTTCAGCAATATCGCACGTGTCTATTACACTAATAGAACG ACCTCCAATTCACTCATCACCCGAACCAAAACCATGAATATCAAACTTGA GTGTCGTTTACCAAAGACACAAATCAACACGTTAAGAGGAAAACCAACCA GGAATGCAACGGACGGAGGAGACGGTTCTGGACCTGAGGGAATCGTTGTT GGTCCACAGTTTATCGAAATTCACGACACTGCACACTTGAGTGTCGTTTA CCAAAGACACAAATCAACACGTTAAGAGGAAAACCAACCAGGAATGCAAC GGACGGAGGAGACGGTTCTGGACCTGAGGGAATCGTTGTTGGTCCACAGT TTATCGAAATTCACGACACTGCACGATCAAACGCTTCATTCCGCATCGAT TTCCAAGTTTACAAATCACTCCAATACGGTCACTCATACGGCAGAGAAGA GTTTCCAATCTATTTGGCTGTCAGTAACAGAATCTACTTCGAAGTTAGCA TcgataaaaaagatttaagcATCTTACCAAGAACCTGTTATGCTACCAAA ACACAGAGTTACCAAGATGAACAGAGATATCATTTGATCCAAGATAGGAT CAAACGCTTCATTCCGCATCGATTTCCAAGTTTACAAATCACTCCAATAC GGTCACTCATACGGCAGAGAAGAGTTTCCAATCTATTTGGCTGTCAGTAA CAGAATCTACTTCGAAGTTAGCATcgataaaaaagatttaagcATCTTAC CAAGAACCTGTTATGCTACCAAAACACAGAGTTACCAAGATGAACAGAGA TATCATTTGATCCAAGATAGTTGTCCTAAAGACCAGACGTACGTCATGCA CAATGACAACATCGCTAAAAACAAATTCCGCTTCAGCGTCCAAGCATTCA ACTTCAAAGATGGCGGAGATAGTATTTTCGTACACTGTCATACGTATGTA TGCAAAAATCAAACGGATGAACAATGTCAATTCGGCTGCCATAACAATGG AAAACGGTCTCGCAGAAGCATCGAGTTGAAAGAAGAGGTTGAAGGCTACA TGACCTCTACACTAGAAATCAAAATCAAGGTTGTCCTAAAGACCAGACGT ACGTCATGCACAATGACAACATCGCTAAAAACAAATTCCGCTTCAGCGTC CAAGCATTCAACTTCAAAGATGGCGGAGATAGTATTTTCGTACACTGTCA TACGTATGTATGCAAAAATCAAACGGATGAACAATGTCAATTCGGCTGCC ATAACAATGGAAAACGGTCTCGCAGAAGCATCGAGTTGAAAGAAGAGGTT GAAGGCTACATGACCTCTACACTAGAAATCAAAATCAAGGGCGACAAGAT TGCAGTTATCCACAACAGATCATCCAGTGATGATGAGACAACAGACGATC AAAGCAAGACTATGTTGTTGTACCTTCAAATCCCTGTGGCCATCGCTGTC TTCGGTCTCCTTTTCTTCGCTTACAAATGTCTCCAAAAGAGAAATGCTTC TTCAAATGGTGGTGTCTTCTTTGAAGAAGAAATGaagttgaagaaaaatg aaatgctGTAAGCGACAAGATTGCAGTTATCCACAACAGATCATCCAGTG ATGATGAGACAACAGACGATCAAAGCAAGACTATGTTGTTGTACCTTCAA ATCCCTGTGGCCATCGCTGTCTTCGGTCTCCTTTTCTTCGCTTACAAATG TCTCCAAAAGAGAAATGCTTCTTCAAATGGTGGTGTCTTCTTTGAAGAAG AAATGaagttgaagaaaaatgaaatgctGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000063_pilon | genome | sc0000063_pilon:1504539..1512361 + |
Properties
| Property Name | Value |
| Aaloc | 1648-1866:7605 |
| Aaloc | 1387-1644:6901 |
| Aaloc | 1165-1383:6228 |
| Aaloc | 1024-1161:5526 |
| Aaloc | 802-1020:4442 |
| Aaloc | 688-798:3302 |
| Aaloc | 394-684:2405 |
| Aaloc | 298-393:1428 |
| Aaloc | 235-294:1119 |
| Aaloc | 88-231:364 |
| Aaloc | 1-84:1 |
|