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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000303_pilon:108160..110445- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_016612 ID=XLOC_016612|Name=XLOC_016612|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2286bp|location=Sequence derived from alignment at sc0000303_pilon:108160..110445- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTTTGATTCGCACTTCAACAGCTTTTTTTGCTTTGGTTGTATTGTT
TGTCAACACGAAAGCTACATCACCAGATCCGTCATGCAACATCGACGCCG
TACTTTACTCCACTCAAAATGACGACATTTACTTCTTTAAAGACAACATG
TACGCCAGATGGAACGTCAAGTCTGACCGGATGTATTATTACGGGCAAAC
GAAAGACCTGATCGACGGTTTAAAGACACCTATAGACGCAGCCATTGAGA
CAAATCTTTATGGTACTCAACAAATTTTTTTTTTCAGCGGCAATCAAGTT
CAAATTTACGATCATTTTCACAAAAGCCCACTGAATACAATTGATTTGAA
AGACTTTGCTGTTGGTCTACCAGAATCAATCGATGCTACCTTCTTCATGC
AGAGTACCTTTTACTTCTTTAAAGATTACCATATTTACTTCATGTTTGTC
GCAGAGAAAAAAGTGCATGGACCATTCAATATCACTAATTTTTTTCCTAA
TCTCAAAGGTCCTGTAAATGCGGCTGTATTGAACACTTTCCATGAAGGCC
GTGATACTGCTTACTTATTTAGCGGTCAGAATTATTATCTTTTTGCTGAG
TCAGCGGAAAAGGTCATTCCTATCGAAAAAAGATGGAAAGGACTTTTAAA
TTCACCACTCTTTGCCAAATGTGAAATCGATTGCAATACTGTCACCATCT
CAAACGATGATTGGAAATTTGGGTCAATTTCGTATAACATGTCAATGAAT
GACACCTATACTCGCTCTATTGGTAAGATACAATTGTGAGGTGTCTTTTA
AACCCTTACGTTTTGTCAAAAGCCTAAGAAATCTTCTTGTACTATATTGA
TAATCCCTAGTGTTCCATCATTGAGCTTTATATATACTCTGGAGAAAATT
CTTCAGCCCTGCCTGCCGAAATCTTTGTAGTACCATTACTCGATAGCTAT
GCGTATAAATGAATAAACACTGATCTGCTTTTTCTTTGATAGAGCGCCGT
TTGACGCCAGTCAAAGCTTTACCACTAAAACGGGTTCTTTGTGAGTGCCA
CTTTAAAAAAAAACTCCCATCAAAGATGAAGGATAAGACTTTATTTAGAA
CCAGTGGTTTGTCTGCTGTCTGGGGACGATAATCCTTCTTTAAGGGACAT
AAAAAGTACTGACGAAATTTGGGAATAAACCGTACGCAGCGGGACACAAA
ATCAAAACGAATGTCACATATAAATAAACAATCAAAACAAATATGGCTGA
TTTTGATTGTTTCGATTGATTTACAAGTTTTTTTTGGTAACCCGATTTTA
ATTATTCTCTTTAATGACACATAGTTCGCGTAATGTTTACATTTTTCTAC
TTCTATGTTCCTTTAAATACTTAAAAGAATTATCACTTTTTCGTCAGCTC
AGAAACTCTTTTGCAATAGTTCTATTTATACTGAGACGATTACCTTAAGT
GGATAAATTTTGGCGGGATTAAAATTGGCGAATTTTGGCAAAATTAAATT
CCCGCCAAATTTTACGAAATTAATTTATCCCTAAATTAAGTCCACGCCAA
AATTTTTCCATTTAAGGTAGTTTACCTGAGACGAGCAATTTAGAAAATTA
GCATTATGGAGGAGTGTACTTTCCATGCATGTTTCAATAAATAGGATCTC
CTCCACAGATCACATTTTACAAACTACTCGTCCCAGACGATTTTTTCATT
TCAGTATAGATGGAGCTAATGATCTTTATAGTTTGAATTAACTTCTTTTT
CTCCTTTGTAAAATTAAATTACGAGACAATGAACAAAGCCAATGGTAATT
TAACTATCGTATTTTCCACTTTCAGGCATCAAAAACTTCACCAAGTACAC
AACAGACCAGGTCCAGATTGATTACAATTTCTCATACAACGAATACTTCT
CCTTCTTACAAAGCGGTGGCGTGAACGTCAAACAAAACACATCTTTCGTT
GTCACAACACCAGATTTCTCCAATATCCGTGATTCCATCAATATCACCAA
ATTACCAAGTGGTGACAAGCATTATTATTTCAGCTACGGAATAAAAACAG
AACGCGAAGACACGATCAAAGATCACATGCTTTGCACCAGTGTTATTGGC
GATCGAAGAAAATGTACAGTTTTCTTGAATCAATACAACATCCAAGTTCC
ATATACCATCGTGTGGAATCATAAGGTTAAGAGTGCCTCGTGCAAATCTC
ATGGTGTCACTGACATTTTAATTGCACATATCGGTAAAATCAACGAGCCT
GCCACCAAGGATATGAACGATCGAATTGAACTCTAA Coding sequence (CDS) from alignment at sc0000303_pilon:108160..110445- >XLOC_016612 ID=XLOC_016612|Name=XLOC_016612|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2466bp|location=Sequence derived from alignment at sc0000303_pilon:108160..110445- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTTTGATTCGCACTTCAACAGCTTTTTTTGCTTTGGTTGTATTGTT
TGTCAACACGAAAGCTACATCACCAGATCCGTCATGCAACATCGACGCCG
TACTTTACTCCACTCAAAATGACGACATTTACTTCTTTAAAGACAACATG
TACGCCAGATGGAACGTCAAGTCTGACCGGATGTATTATTACGGGCAAAC
GAAAGACCTGATCGACGGTTTAAAGACACCTATAGACGCAGCCATTGAGA
CAAATCTTTATGGTACTCAACAAATTTTTTTTTTCAGCGGCAATCAAGTT
CAAATTTACGATCATTTTCACAAAAGCCCACTGAATACAATTGATTTGAA
AGACTTTGCTGTTGGTCTACCAGAATCAATCGATGCTACCTTCTTCATGC
AGAGTACCTTTTACTTCTTTAAAGATTACCATATTTACTTCATGTTTGTC
GCAGAGAAAAAAGTGCATGGACCATTCAATATCACTAATTTTTTTCCTAA
TCTCAAAGGTCCTGTAAATGCGGCTGTATTGAACACTTTCCATGAAGGCC
GTGATACTGCTTACTTATTTAGCGGTCAGAATTATTATCTTTTTGCTGAG
TCAGCGGAAAAGGTCATTCCTATCGAAAAAAGATGGAAAGGACTTTTAAA
TTCACCACTCTTTGCCAAATGTGAAATCGATTGCAATACTGTCACCATCT
CAAACGATGATTGGAAATTTGGGTCAATTTCGTATAACATGTCAATGAAT
GACACCTATACTCGCTCTATTGATGGGTTTGATTCGCACTTCAACAGCTT
TTTTTGCTTTGGTTGTATTGTTTGTCAACACGAAAGCTACATCACCAGAT
CCGTCATGCAACATCGACGCCGTACTTTACTCCACTCAAAATGACGACAT
TTACTTCTTTAAAGACAACATGTACGCCAGATGGAACGTCAAGTCTGACC
GGATGTATTATTACGGGCAAACGAAAGACCTGATCGACGGTTTAAAGACA
CCTATAGACGCAGCCATTGAGACAAATCTTTATGGTACTCAACAAATTTT
TTTTTTCAGCGGCAATCAAGTTCAAATTTACGATCATTTTCACAAAAGCC
CACTGAATACAATTGATTTGAAAGACTTTGCTGTTGGTCTACCAGAATCA
ATCGATGCTACCTTCTTCATGCAGAGTACCTTTTACTTCTTTAAAGATTA
CCATATTTACTTCATGTTTGTCGCAGAGAAAAAAGTGCATGGACCATTCA
ATATCACTAATTTTTTTCCTAATCTCAAAGGTCCTGTAAATGCGGCTGTA
TTGAACACTTTCCATGAAGGCCGTGATACTGCTTACTTATTTAGCGGTCA
GAATTATTATCTTTTTGCTGAGTCAGCGGAAAAGGTCATTCCTATCGAAA
AAAGATGGAAAGGACTTTTAAATTCACCACTCTTTGCCAAATGTGAAATC
GATTGCAATACTGTCACCATCTCAAACGATGATTGGAAATTTGGGTCAAT
TTCGTATAACATGTCAATGAATGACACCTATACTCGCTCTATTGGCATCA
AAAACTTCACCAAGTACACAACAGACCAGGTCCAGATTGATTACAATTTC
TCATACAACGAATACTTCTCCTTCTTACAAAGCGGTGGCGTGAACGTCAA
ACAAAACACATCTTTCGTTGTCACAACACCAGATTTCTCCAATATCCGTG
ATTCCATCAATATCACCAAATTACCAAGTGGTGACAAGCATTATTATTTC
AGCTACGGAATAAAAACAGAACGCGAAGACACGATCAAAGATCACATGCT
TTGCACCAGTGTTATTGGCGATCGAAGAAAATGTACAGTTTTCTTGAATC
AATACAACATCCAAGTTCCATATACCATCGTGTGGAATCATAAGGTTAAG
AGTGCCTCGTGCAAATCTCATGGTGTCACTGACATTTTAATTGCACATAT
CGGTAAAATCAACGAGCCTGCCACCAAGGATATGAACGATCGAATTGAAC
TCTAAGCATCAAAAACTTCACCAAGTACACAACAGACCAGGTCCAGATTG
ATTACAATTTCTCATACAACGAATACTTCTCCTTCTTACAAAGCGGTGGC
GTGAACGTCAAACAAAACACATCTTTCGTTGTCACAACACCAGATTTCTC
CAATATCCGTGATTCCATCAATATCACCAAATTACCAAGTGGTGACAAGC
ATTATTATTTCAGCTACGGAATAAAAACAGAACGCGAAGACACGATCAAA
GATCACATGCTTTGCACCAGTGTTATTGGCGATCGAAGAAAATGTACAGT
TTTCTTGAATCAATACAACATCCAAGTTCCATATACCATCGTGTGGAATC
ATAAGGTTAAGAGTGCCTCGTGCAAATCTCATGGTGTCACTGACATTTTA
ATTGCACATATCGGTAAAATCAACGAGCCTGCCACCAAGGATATGAACGA
TCGAATTGAACTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000303_pilon | genome | sc0000303_pilon:108160..110445 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 775-1233:460 |
| Aaloc | 1-771:2287 |
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