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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000282_pilon:400861..406980- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_016601 ID=XLOC_016601|Name=XLOC_016601|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6120bp|location=Sequence derived from alignment at sc0000282_pilon:400861..406980- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGATTAAATTGGCGTTGATCACCTTCTTTGTTTCGTCCAGCTTTGC
CGATAAATATTGTAAGTATTTGCTCTTTTATCATCATCATAAGAATGGTG
TTTTCCAATTCATCATGAATATTCTTATCTTTTTGGGAGAAATTATCCTG
AAACATTCTTATACTATGGTTAGCTTTGGATCCAATCCCGGCCAAAATCT
AACACTTGATACCTAGCTCAAGCAAAAATTTGCTATTAGCATTACTGGGG
AATAATTGGCAATTTAATTGCAAAATACTCTAAAAATGATATTCTTGGGA
ATACTTGATATGAGAAACCTGCATTCTCGGGGTTTACTACATTCTCGGGG
TCAGGTGCTGTATGTATAAACTGATTCGATCATTCACAAGGAAAATATTT
TGGTCAAAGCTGCGAAATTCTCCCCTTCTAGCACAACGACCAAGAACCTG
AGAAACATTGCGTTCAAAGTGAAAAGTGCTTATAAAAAATATCGAAATCC
TGGTTTAAAAAAAAAATTATTTCAATTTCGATATCTACCACGGCTGCCAT
TTGCAGACATTTCATAAGTAACATAAGATTCTACAACTTAGGTTCAATAG
ATGAATGGCGCATTTTTTAGTCTATTTTCCCAAACCTCTGATCTATTACC
CTGAGTATCAAAGGTTAAGAATATTTCAGCCTCTGAAGACCAATAATAGA
AATTTTATTGCGCATGTGTCAATCTAATCACTGTAAATAGAATCAAAGAT
GAAGAGCAAATATTACCATATTAATGTCTAGCAGACTGTATCAGTATGCA
GTTTACTATTTACGAATTCCCCAGAAACCTCAAAGTGTAATTGATATGAG
TTTCTTTCGAAAGAAATCTTATCCCAAAATGTATAAAACAGTAATTATTA
AACTTTTAATTATGGAAACACTTTAATTGAATTGAAATAATAAACAGACT
TTATTTTATGATTCTCTATGACTGACTCTTTTTGAAAAGCATTGATGACA
TTTTTGAATTGTGTTTTCAACGACGGGAATAAAAATATCAACTTTGAACT
TCATCCAAGATCTTGGATGGTCGTCATGGTTACTTTTCTTTGCGTTGATT
GCGCGCTGAATAGAATCTGGATTGGTCGGCACAGCGTCAATATATGATTT
CGACCTGTGCTTTTCACGGTACTGATCTATAAAAAAAAGATATCCTCTGA
GTTGCATAACTTTGCTGAAACCTGCTTTTGCGGGGGGAGGGGTATATTTC
GGCTTTTACGGATACTCCCATAGAATTGAGCTGATTATAATCCATTTGAT
ACAGTAATATTATTGTTATATAATAATACTATAATCGTAAGAAGATAGTA
TCAGTTTGCATAAACGATAATTTTCCCTTCCATTATTTTTGCTTATGTCT
CATCAATTAGTCGTCTAGCATCATAAATTTGACTTATAGATATCAAGAAA
ACATATCTGTATTATTTCAGCTGTTGAATCTTGCCGAGAGGTGTACACAA
ATTGGAATGATGATGGAAACGGTGGCCTTGTTTATTTGGACAGGCACGAC
GTTCGATGCAAAGGCAACGAATACATCAAATATATGAAATTGCAAAGAAA
ATATGTAGGCTGGTTCAAACATGAAATACGTTATAAGTATATATGTTGTC
CAACGGCTGCATGTATAAATGAGCATCATTCGACTCAGGACAGATATAAT
GGTGGTGGTCAAGGGAACGCTTTCACCTTAAAACACCAGTCAGTTGATTG
CGGAAAAAATGGTTAGTATAAGAAAATTACCATGACAAACATTCATAGAA
TAAATTGAAGCACATATGATAATGATAATGATGGGTTATAAGGGAAGGTT
TATTCGATAGAAGATTCCCTTGAAAATCTAATTAAAGAGCATCATTTGTA
TTTGTAAGATAATTATCGTCAATCTCCACATATAAAGATTCAGAGAAAGC
TAAACCAGGCCTGGCTAAACTATCGTACTCATGGTTTCTCCGGAACGTTA
ATTTATCTGTATAAAGAGTCAATTTCGGTTTTAACTCGTCATTGTGAAAA
TTCCAGTAGCCTTTATTTCTGTTATAATTAAAATTAACTTTAAAAGCTTT
ATATTATTTCAATACGACAGCTTTGCAACAGGTCAAACTTGTGAGAACTG
GCGACAATATTCGATACGATTATACATGCTGCAAAAAACCTAACCCTTCA
CTCACCACATCATGTAAACCGGAAAAAAGAACAGGTATAAAAAACATAGT
AAATAATCGGTTATTCGCAGGGAGCTAAGGAAAGGGTTTGGAGTATTTTC
CGAAAACCTTTTTTGTATAAAATGTTCAACTCTGAAATTTTAAAAACTCG
TTATTTATGTCCTCGTGTGGCGTGGATCATCGATTTTATCTTATCGTTTT
TCACATAATTCTAGCCCTTATTGAGAAATTAAGTCCCCGCAACAAAATCT
AAAATCTGAATTGAAGTCACATTTCCCAACAAATAGAAAGAAATTTAGGG
GGAAAGAGTCCGACTTATTCATTTAAGTTTCACCGCAAATTACCAGTAAG
AACAAAATTTGGCAAAAACAGTACATTACGTTGCTTTAATTAACTGAAAA
TTTCAAACTTCAATGATACTCTAGGCGATGGTGACACTTTGGTATGAAAA
ATCACTTATTACAGATAACTCAGGCCTTCTGATTTGTATATGAGCAACAG
TTTCTTTAAGATTTAGAGCCCCTTTTTAGCGTCTTTGCGAAAGCCATATA
GACACCCTTGATTTACATCATTGACCAATTTCATACTTGACAAAAGCACA
AAAGCTAAAGGCCGCTCTCCACTTGCGCGTGCTTTAATCGCACTTTTTGG
CTTCAATCCTTTTTGCTTGGAAAAAAGATTACGTCATAAAAATGTAGCGC
GCGCTCGAAAAAAAAGTTGAACACATTTCAACTTTTTTCAACCGTTACGT
CAGATCACGCCAATGGAATTTCTTCATTTTTCTTTTGACAAATAGCGTGG
AAGCTTTGCTCGAAAAAGTGCGATTGAAGCGCGCGCAAGTGGAGACCGGC
CTTAACCCAAAAATCAGCAAAAGTCACAAAATTTCAGCCTTTAAAGTGAT
TTCCAACATTTTTTAAATAATTGGTACTATCTAGTATGTTACTCATGAAA
GCATCTTTAGAAAATTTTCAAAAGATCGGCACTGGTTTAAACGGCCTACT
TTTTTGTCGATCTTAATTCAAACAATAATGTTTTCATGTGAAAAGACACC
AATGATCCGTGTTAGCTATGCTAGCGAATATCAACACACCTTGGGCATCA
TTATGCGCAAGGTTGTTGATATAGCTATCAGGTCCTAGAGATAATTTAAT
ATTGGAAATAGAGTATATCGGAGTTCATAGAGTAAAGACATAAGAAAACC
GTAGTTACAAACTCTTACATTTATCACACCCCCAGAACAACATTTTGTTA
GCTCACAAGGCTAACAAATGGAGGTTCTACCGAGATCGTAATGATTCGGA
AGTTGTTGTGTTGTTCTGGGGATGCGATACGAGAGTGAGTTAGCTTGAGA
GCTATAAAGATGAACAAAACAGTGTTGAACATTTGCATAAAATATTTTAG
CATGAACATTTGAGATGTTTCATGGTTGGAATGGTCAAATGATACATTGA
GTTGAAATGGCCATTCGAAGTTTCTTGAATTAAAAAGTTTCTTGGAATTG
ACTTATTGATTGATATTGTTATGGTATGGATATGATTTGGTGAAATCATT
TGTTGTCCTGAGCAGGACTATAAAATGTTCTGGGGCTCCCTTGAGCAAGG
ACAGTACCCCAAAGCTCCCCTTTTTCAGGGTTACGACGAAGTTAATTAAC
GTATAATGACAGTTACAAGAGGTACGTGTGTACGAATTTTTGTGATTTGT
GGGTATTTATGAGAAAATACGAATGTTGTGACTTACAAATATTTATGGTG
AAATACGTATCATGAGTAATATAGCCAAAGGAAGGCGAGTAGCAATACAC
AGATGAATATGTTCCTAATGAGAAAGACAACGGTGTATTTGCTTAACGTA
AGCACACATTGAAATGGTAGTCCAGCAAGATTACACATTTAAACGTAAAC
ACGCTTTGGGAAGGCATCAAATAGAAATGAAGTATTAAACAAATAGAGGC
ACCAAAGATTATGTACCGTATGGGAAAGAGGAATCCCAGAAAGATGTAAA
GGAAAAACTTTCGAAATCAGCAAAAGGCTAAGAATTCAATATAAAAAAAA
AAGGGATGAGAAATATTATGCGCAAAATGAGAGAAAAATTAAAATAAAAT
TAGAAGATTTAAATTAAAATCAATGAATCAAGCATGAACACATGCTGAAT
GTGAGGAAGCAGTTAAGCGAATAACTTGACTAAATTCAAAATCTCATCAC
AGAGAGATGAAAAAAGCTGTTTATCAAGCTGAAAAGTTTTGAAAACAAAG
CAAACAAACGGAATATTGTCTAAATGTTTCGAGAAATTGTACCCAAGATG
AGGTAAACATAAACAATGGAGAAATTATCTCAACATAGATTAGATAACAA
AAGTAATTGTTTCTAAACAAATATACAGATTCAAACAAACAGCCGCTTTC
AAACAAGCATTCAATCATACAAGCAGTGATATCTGAAAAATCTGTGCCAG
ACGAAGCAAATTACTCAGCAGAAGAAGAAAGCGAGTCAAAAACAAGCTTA
TCTTCAATCGAAGAAAACGAAGAAGCTAAAAAGGAACAGTCAAACACACC
GTTATCAATAGAAGAATGGTTAAAATGTCCTGAAAGACATAGTTTAGTGG
TCAAAGATGTCCGAAGTGAAGGAACGCATGGTTTCACTGAGAAAACAGAA
TAACATAACAAAACATTATGAAGAAGCTGCCCATGGTTACGTCGCAGTAA
AAACGATTGCATCGAGAGAAGAATGCTAAGTTGATCCATGGTTGTAAGAC
GCAGAGAAACGCAGTAACAGCTTTCCAAGATAATTATGCGTTATCAGATT
CTTAAAAGTAAGGTGAATCATGCGGAACTCGACAAGAGACTCGACAACAG
AAATCTGAACTATCTTCATCAAGAAACTAAAGCATCAAAATTCTGATAAG
GACAAAGATAAGGAGTACAATTATGAGCATATGAACAATGAAGAGGCATA
AGTTATAGCAGGAAACTTAAAGCGCAAAACGAAAGACTTCAAGCCAAGAT
TGAACACTTTCGTGAGAAAATGAGTTTCACTAATTGCGCACTTTATTACA
TAACATATTGCAACTGTTAGATATCAGAAGAGATGATGTATTTGAAAGAA
AACTTGAGTTGCCAGACATGAGATGTTAGATATTATCGCCATGAACAGTG
AACGATATGAGAATTCGCTACCCTCCATCGCATTGAAAATTGACACTCAT
TCTATCCGACGACGAAGTCTTTCTGACACTAATGGTTCAATTAACATTTT
ATTATATCACTAGAAATAAATATTTTATTATTTAAGGCTGTGAACCGTTA
GGGTACCAGTAAAAAGAAATTGTTTTATTTAAGAGATTATTTTACAAAAT
TTGTGGTATTTTATTAGGAGAAAATGTGGAACATTTTTTTATTTCAACGG
GGCTGTTAGCTATGCTAGCGAATATCAACACACCTTGGGCATCATTATGC
GCAAGGTTGTTGATATAGCTATCAGGTCCTAGAGATAATTTAATATTGGA
AATAGAGTATATCGGAGTTCATAGAGTAAAGACATAAGAAAACCGTAGTT
ACAAACTCTTACATTTATCACACCCCCAGAACAACATTTTGTTAGCTCAC
AAGGCTAACAATCCGCATCATATCGAATGGTGCCATAAAATACTTTTTGA
AATTGATATGGGAAGTATTATACTCATAGCTGTTTATACGCATTGATGGA
AAAAAATTCCACTGGGGCTGTCAGACAAGGTTGTCTTAAATTTTCTTTTC
TTTAAATTTCAGAACCCAAGGATGCTGGTCATGGCAATGCAGCTTACCTT
GATCGACATACTATAAGCTGTCATGGTACCGATTACTATCTTGCATCTTT
TAGGCTTTATGAGCTGCGTTTCGTTTACAACAGATCACTATATATTATTC
GATGTTGTAAAATTAATTAA Coding sequence (CDS) from alignment at sc0000282_pilon:400861..406980- >XLOC_016601 ID=XLOC_016601|Name=XLOC_016601|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1248bp|location=Sequence derived from alignment at sc0000282_pilon:400861..406980- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGATTAAATTGGCGTTGATCACCTTCTTTGTTTCGTCCAGCTTTGC
CGATAAATATTATGATGATTAAATTGGCGTTGATCACCTTCTTTGTTTCG
TCCAGCTTTGCCGATAAATATTCTGTTGAATCTTGCCGAGAGGTGTACAC
AAATTGGAATGATGATGGAAACGGTGGCCTTGTTTATTTGGACAGGCACG
ACGTTCGATGCAAAGGCAACGAATACATCAAATATATGAAATTGCAAAGA
AAATATGTAGGCTGGTTCAAACATGAAATACGTTATAAGTATATATGTTG
TCCAACGGCTGCATGTATAAATGAGCATCATTCGACTCAGGACAGATATA
ATGGTGGTGGTCAAGGGAACGCTTTCACCTTAAAACACCAGTCAGTTGAT
TGCGGAAAAAATGCTGTTGAATCTTGCCGAGAGGTGTACACAAATTGGAA
TGATGATGGAAACGGTGGCCTTGTTTATTTGGACAGGCACGACGTTCGAT
GCAAAGGCAACGAATACATCAAATATATGAAATTGCAAAGAAAATATGTA
GGCTGGTTCAAACATGAAATACGTTATAAGTATATATGTTGTCCAACGGC
TGCATGTATAAATGAGCATCATTCGACTCAGGACAGATATAATGGTGGTG
GTCAAGGGAACGCTTTCACCTTAAAACACCAGTCAGTTGATTGCGGAAAA
AATGCTTTGCAACAGGTCAAACTTGTGAGAACTGGCGACAATATTCGATA
CGATTATACATGCTGCAAAAAACCTAACCCTTCACTCACCACATCATGTA
AACCGGAAAAAAGAACAGCTTTGCAACAGGTCAAACTTGTGAGAACTGGC
GACAATATTCGATACGATTATACATGCTGCAAAAAACCTAACCCTTCACT
CACCACATCATGTAAACCGGAAAAAAGAACAGAACCCAAGGATGCTGGTC
ATGGCAATGCAGCTTACCTTGATCGACATACTATAAGCTGTCATGGTACC
GATTACTATCTTGCATCTTTTAGGCTTTATGAGCTGCGTTTCGTTTACAA
CAGATCACTATATATTATTCGATGTTGTAAAATTAATTAAAACCCAAGGA
TGCTGGTCATGGCAATGCAGCTTACCTTGATCGACATACTATAAGCTGTC
ATGGTACCGATTACTATCTTGCATCTTTTAGGCTTTATGAGCTGCGTTTC
GTTTACAACAGATCACTATATATTATTCGATGTTGTAAAATTAATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000282_pilon | genome | sc0000282_pilon:400861..406980 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 469-624:157 |
| Aaloc | 355-465:3999 |
| Aaloc | 64-351:4649 |
| Aaloc | 1-60:6121 |
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