XLOC_016471.3 (mRNA) -

Overview
NameXLOC_016471.3
Unique NameXLOC_016471.3
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000355_pilon:178101..178973-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_016471.3 ID=XLOC_016471.3|Name=XLOC_016471.3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=873bp|location=Sequence derived from alignment at sc0000355_pilon:178101..178973- (Clytia hemisphaerica_ch_hm2_pilon)
ACAGACGAAAACCAAGACACCATGCTTGAAGCTTTGATTACATCAGTGTC ACTTCTGCGTCCAACACCTCAAACAGCCGCTATTGTTCGAGTCGACAATG CACCTGGACTTTACGCCCTTCGTGATAATCTTGTCCTTCAACAACATCAA ATAACCCTTGACTACGGAAGAGTTAAGAATCCAAACAAGAACCCAGTTGC AGAAAAAGCCATCAACGAGCTCCACAAAGAAATTGTTCGCCAAATGCCTG ACGGTGGACCAATGTCGTCCATTTCACTAGCCAATGTTGTTTCTCAGCTT AATTCCAGATTACGCATGCCTGGTTTGTCGGCTTGGGAAATCTTTCACCA ACGAGATCAGTTCTCCGGCAAAGCCATCTACACACCAGACGAAGTTATTT GTGAGACGAAAACTAACTCACGAAAAGCCAATCATGCGTCAAGTGCTAAA CACAAAGCACGTGGCGGACACTTAGCATCCATCGCTGATGTCAAAGTTGG CTCCCTTGTTTATATCAAATCGGAACGAGACAAAACCAAACCACGTGATC GATATATCATCGTTTCCATCGAGGGCGATTCTTGCTTGCTACAAAAACTC GTAAAATCACAACTTCGTTCCAAACGATACCTCCTTAAACTCACCGAGAT CATCCCAGTTGTTCCATTATCTGACGGTTCGCAAAGCTACCGGTTACCAT CTATGGAGGACAGTGACTCAGATACTGAAACTATTCATGAGTCTGAATTA TCTACTCAACAACCTGTCGCTAATGAACAACCGCGTCGCCCTACGCGTAA TCGCAACCAACCATTATGGATGCGATCTGGTGAATTTGAACTAGGTCATG AAGAATCGGAGAATGAAGAATGA

Coding sequence (CDS) from alignment at sc0000355_pilon:178101..178973-

>XLOC_016471.3 ID=XLOC_016471.3|Name=XLOC_016471.3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1746bp|location=Sequence derived from alignment at sc0000355_pilon:178101..178973- (Clytia hemisphaerica_ch_hm2_pilon)
ACAGACGAAAACCAAGACACCATGCTTGAAGCTTTGATTACATCAGTGTC
ACTTCTGCGTCCAACACCTCAAACAGCCGCTATTGTTCGAGTCGACAATG
CACCTGGACTTTACGCCCTTCGTGATAATCTTGTCCTTCAACAACATCAA
ATAACCCTTGACTACGGAAGAGTTAAGAATCCAAACAAGAACCCAGTTGC
AGAAAAAGCCATCAACGAGCTCCACAAAGAAATTGTTCGCCAAATGCCTG
ACGGTGGACCAATGTCGTCCATTTCACTAGCCAATGTTGTTTCTCAGCTT
AATTCCAGATTACGCATGCCTGGTTTGTCGGCTTGGGAAATCTTTCACCA
ACGAGATCAGTTCTCCGGCAAAGCCATCTACACACCAGACGAAGTTATTT
GTGAGACGAAAACTAACTCACGAAAAGCCAATCATGCGTCAAGTGCTAAA
CACAAAGCACGTGGCGGACACTTAGCATCCATCGCTGATGTCAAAGTTGG
CTCCCTTGTTTATATCAAATCGGAACGAGACAAAACCAAACCACGTGATC
GATATATCATCGTTTCCATCGAGGGCGATTCTTGCTTGCTACAAAAACTC
GTAAAATCACAACTTCGTTCCAAACGATACCTCCTTAAACTCACCGAGAT
CATCCCAGTTGTTCCATTATCTGACGGTTCGCAAAGCTACCGGTTACCAT
CTATGGAGGACAGTGACTCAGATACTGAAACTATTCATGAGTCTGAATTA
TCTACTCAACAACCTGTCGCTAATGAACAACCGCGTCGCCCTACGCGTAA
TCGCAACCAACCATTATGGATGCGATCTGGTGAATTTGAACTAGGTCATG
AAGAATCGGAGAATGAAGAATGAACAGACGAAAACCAAGACACCATGCTT
GAAGCTTTGATTACATCAGTGTCACTTCTGCGTCCAACACCTCAAACAGC
CGCTATTGTTCGAGTCGACAATGCACCTGGACTTTACGCCCTTCGTGATA
ATCTTGTCCTTCAACAACATCAAATAACCCTTGACTACGGAAGAGTTAAG
AATCCAAACAAGAACCCAGTTGCAGAAAAAGCCATCAACGAGCTCCACAA
AGAAATTGTTCGCCAAATGCCTGACGGTGGACCAATGTCGTCCATTTCAC
TAGCCAATGTTGTTTCTCAGCTTAATTCCAGATTACGCATGCCTGGTTTG
TCGGCTTGGGAAATCTTTCACCAACGAGATCAGTTCTCCGGCAAAGCCAT
CTACACACCAGACGAAGTTATTTGTGAGACGAAAACTAACTCACGAAAAG
CCAATCATGCGTCAAGTGCTAAACACAAAGCACGTGGCGGACACTTAGCA
TCCATCGCTGATGTCAAAGTTGGCTCCCTTGTTTATATCAAATCGGAACG
AGACAAAACCAAACCACGTGATCGATATATCATCGTTTCCATCGAGGGCG
ATTCTTGCTTGCTACAAAAACTCGTAAAATCACAACTTCGTTCCAAACGA
TACCTCCTTAAACTCACCGAGATCATCCCAGTTGTTCCATTATCTGACGG
TTCGCAAAGCTACCGGTTACCATCTATGGAGGACAGTGACTCAGATACTG
AAACTATTCATGAGTCTGAATTATCTACTCAACAACCTGTCGCTAATGAA
CAACCGCGTCGCCCTACGCGTAATCGCAACCAACCATTATGGATGCGATC
TGGTGAATTTGAACTAGGTCATGAAGAATCGGAGAATGAAGAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_016471.3XLOC_016471.3-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000355_pilongenomesc0000355_pilon:178101..178973 -
Properties
Property NameValue
Aaloc1-873:874