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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000343_pilon:84323..85971+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_016394 ID=XLOC_016394|Name=XLOC_016394|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1649bp|location=Sequence derived from alignment at sc0000343_pilon:84323..85971+ (Clytia hemisphaerica_ch_hm2_pilon)
atggcaGAAGCCTTGGTTGCTGCAGCCTCGTCAAACTACCATCCAAGAAA
CCCCACCTCAAAACCACCTATCGGACTATCTAAAGACAAATATGTCAATC
AAGTcaagaagcaaaaaaatgttgcaAGTTATCATAAAGATGATGGTTTG
TTTGGTGATAAATTGACGGTTGAAAAATCCAGTGTTGAAAAATCTTTGAG
TTGGGGTAATTTGACTCAATTATCTTTAACAGATCACCATAGATCTTTAA
GCGCAAGCAACATTTATGCTTTACAAGACCCCGACCTTTCAATTAAAGCT
GCTATCTCAAAGAAAGCGTATGATAAGCCACATACTtcgttttcaaaaga
aaaggcAAAGTTTACAGCATGGACGCAAAAGTATTACCATCAACTGACTG
TTGGTTGTGGTAATCGGAGATGTAAAAACATGTTTTGTAAGTCTTCGtct
aaaatgaagaaatttgatCAAAGAATGATTTCCTTAATCAGTATCGAACT
CTCAGGCTACAAAAATCAGTATCTGTGTATTAAGGATAAGAAAAGACAAG
AGGCGAAAGTATTGGATGTAGATTGTTTTAATATTGACACTCCCACAGAG
AAGGATGAACAGGTGCCTTTCTTGTATCGCTTTTACTCCATGTCACCATT
TCGCAGTTTGTTTTTACCGTGTCCGTTGACACACTCTGGTCTTGGCTTAC
ATAAGACACACAGTCAAGGCGAGCTGAATACACCAAAGAAAGCAAAACCA
ATTGTGAATAAACAAGAATCGAATTTAACAGACACTTTCAAAAGTCATTT
AACATCCTTTACCACTTCAATTTCGAGCAGTGTTAGCAATATTTTCCATT
ACGCTAGTAACTCTGATATCAATACCCAAAACGtggaaaataacaaaatt
aCGGACGATGAAGGAAGTATCCTTGATGAAAAGGAATGTGATGAAACATC
TTCATCCCCAAAGTGTGGCGATCAGTTTTTGACACGTCGCCGTATCCCAA
GTGTCCGCATTTTCGGTGATGAGTATGCAGTGGATAGAGACACAACCTTG
CACGACAATATTGATGAGTTTGAGAAAAGCGTTGCAGAGGAATTCAAGAA
AGAAGCATCTGAGAATGAGTTTGAGGATTCCGTTTTATCGGAAGAAGATG
TGACCATTTTCCATGACGATGACGAAGAGGAAGAGGATTCAGAGGAGCCT
GATGGATATTCCTTAACTCATCTAACGTtagaaatgtttcaaaaaatatt
gaataactATCAGGAATGCAGTGATGAGAGTTTCCTGTTGAACACGATAA
GAACTGTCTTTGCTTCATGGGATGCACTCATGCTCAGTTTTCTTGATGAA
GGAATCtccaaaaataagaaacatcCATTCAGTGTTAAAATTGATGACGT
TCATGACGTGTTTTTATTATTGGAGCAGTTTGACAAACATGATAAATTTC
GGACAGTTTTAACGGACACTCTACAAGTTATGCTATTGAAAAAACAGTCG
ATCAAAGAACCGAGAGAATTGAAACCTATAGTGGTGATTCTGTTGATGCC
ATACTTGTTCAATTACATTGATGTGGTTCTGGAAGTCTCCTCGATGATCA
GTCGCTTGTCTTTGGAGCACCTGAGTGTTCTCTCGTCATTTATCGCTGA Coding sequence (CDS) from alignment at sc0000343_pilon:84323..85971+ >XLOC_016394 ID=XLOC_016394|Name=XLOC_016394|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3298bp|location=Sequence derived from alignment at sc0000343_pilon:84323..85971+ (Clytia hemisphaerica_ch_hm2_pilon)
atggcaGAAGCCTTGGTTGCTGCAGCCTCGTCAAACTACCATCCAAGAAA
CCCCACCTCAAAACCACCTATCGGACTATCTAAAGACAAATATGTCAATC
AAGTcaagaagcaaaaaaatgttgcaAGTTATCATAAAGATGATGGTTTG
TTTGGTGATAAATTGACGGTTGAAAAATCCAGTGTTGAAAAATCTTTGAG
TTGGGGTAATTTGACTCAATTATCTTTAACAGATCACCATAGATCTTTAA
GCGCAAGCAACATTTATGCTTTACAAGACCCCGACCTTTCAATTAAAGCT
GCTATCTCAAAGAAAGCGTATGATAAGCCACATACTtcgttttcaaaaga
aaaggcAAAGTTTACAGCATGGACGCAAAAGTATTACCATCAACTGACTG
TTGGTTGTGGTAATCGGAGATGTAAAAACATGTTTTGTAAGTCTTCGtct
aaaatgaagaaatttgatCAAAGAATGATTTCCTTAATCAGTATCGAACT
CTCAGGCTACAAAAATCAGTATCTGTGTATTAAGGATAAGAAAAGACAAG
AGGCGAAAGTATTGGATGTAGATTGTTTTAATATTGACACTCCCACAGAG
AAGGATGAACAGGTGCCTTTCTTGTATCGCTTTTACTCCATGTCACCATT
TCGCAGTTTGTTTTTACCGTGTCCGTTGACACACTCTGGTCTTGGCTTAC
ATAAGACACACAGTCAAGGCGAGCTGAATACACCAAAGAAAGCAAAACCA
ATTGTGAATAAACAAGAATCGAATTTAACAGACACTTTCAAAAGTCATTT
AACATCCTTTACCACTTCAATTTCGAGCAGTGTTAGCAATATTTTCCATT
ACGCTAGTAACTCTGATATCAATACCCAAAACGtggaaaataacaaaatt
aCGGACGATGAAGGAAGTATCCTTGATGAAAAGGAATGTGATGAAACATC
TTCATCCCCAAAGTGTGGCGATCAGTTTTTGACACGTCGCCGTATCCCAA
GTGTCCGCATTTTCGGTGATGAGTATGCAGTGGATAGAGACACAACCTTG
CACGACAATATTGATGAGTTTGAGAAAAGCGTTGCAGAGGAATTCAAGAA
AGAAGCATCTGAGAATGAGTTTGAGGATTCCGTTTTATCGGAAGAAGATG
TGACCATTTTCCATGACGATGACGAAGAGGAAGAGGATTCAGAGGAGCCT
GATGGATATTCCTTAACTCATCTAACGTtagaaatgtttcaaaaaatatt
gaataactATCAGGAATGCAGTGATGAGAGTTTCCTGTTGAACACGATAA
GAACTGTCTTTGCTTCATGGGATGCACTCATGCTCAGTTTTCTTGATGAA
GGAATCtccaaaaataagaaacatcCATTCAGTGTTAAAATTGATGACGT
TCATGACGTGTTTTTATTATTGGAGCAGTTTGACAAACATGATAAATTTC
GGACAGTTTTAACGGACACTCTACAAGTTATGCTATTGAAAAAACAGTCG
ATCAAAGAACCGAGAGAATTGAAACCTATAGTGGTGATTCTGTTGATGCC
ATACTTGTTCAATTACATTGATGTGGTTCTGGAAGTCTCCTCGATGATCA
GTCGCTTGTCTTTGGAGCACCTGAGTGTTCTCTCGTCATTTATCGCTGAa
tggcaGAAGCCTTGGTTGCTGCAGCCTCGTCAAACTACCATCCAAGAAAC
CCCACCTCAAAACCACCTATCGGACTATCTAAAGACAAATATGTCAATCA
AGTcaagaagcaaaaaaatgttgcaAGTTATCATAAAGATGATGGTTTGT
TTGGTGATAAATTGACGGTTGAAAAATCCAGTGTTGAAAAATCTTTGAGT
TGGGGTAATTTGACTCAATTATCTTTAACAGATCACCATAGATCTTTAAG
CGCAAGCAACATTTATGCTTTACAAGACCCCGACCTTTCAATTAAAGCTG
CTATCTCAAAGAAAGCGTATGATAAGCCACATACTtcgttttcaaaagaa
aaggcAAAGTTTACAGCATGGACGCAAAAGTATTACCATCAACTGACTGT
TGGTTGTGGTAATCGGAGATGTAAAAACATGTTTTGTAAGTCTTCGtcta
aaatgaagaaatttgatCAAAGAATGATTTCCTTAATCAGTATCGAACTC
TCAGGCTACAAAAATCAGTATCTGTGTATTAAGGATAAGAAAAGACAAGA
GGCGAAAGTATTGGATGTAGATTGTTTTAATATTGACACTCCCACAGAGA
AGGATGAACAGGTGCCTTTCTTGTATCGCTTTTACTCCATGTCACCATTT
CGCAGTTTGTTTTTACCGTGTCCGTTGACACACTCTGGTCTTGGCTTACA
TAAGACACACAGTCAAGGCGAGCTGAATACACCAAAGAAAGCAAAACCAA
TTGTGAATAAACAAGAATCGAATTTAACAGACACTTTCAAAAGTCATTTA
ACATCCTTTACCACTTCAATTTCGAGCAGTGTTAGCAATATTTTCCATTA
CGCTAGTAACTCTGATATCAATACCCAAAACGtggaaaataacaaaatta
CGGACGATGAAGGAAGTATCCTTGATGAAAAGGAATGTGATGAAACATCT
TCATCCCCAAAGTGTGGCGATCAGTTTTTGACACGTCGCCGTATCCCAAG
TGTCCGCATTTTCGGTGATGAGTATGCAGTGGATAGAGACACAACCTTGC
ACGACAATATTGATGAGTTTGAGAAAAGCGTTGCAGAGGAATTCAAGAAA
GAAGCATCTGAGAATGAGTTTGAGGATTCCGTTTTATCGGAAGAAGATGT
GACCATTTTCCATGACGATGACGAAGAGGAAGAGGATTCAGAGGAGCCTG
ATGGATATTCCTTAACTCATCTAACGTtagaaatgtttcaaaaaatattg
aataactATCAGGAATGCAGTGATGAGAGTTTCCTGTTGAACACGATAAG
AACTGTCTTTGCTTCATGGGATGCACTCATGCTCAGTTTTCTTGATGAAG
GAATCtccaaaaataagaaacatcCATTCAGTGTTAAAATTGATGACGTT
CATGACGTGTTTTTATTATTGGAGCAGTTTGACAAACATGATAAATTTCG
GACAGTTTTAACGGACACTCTACAAGTTATGCTATTGAAAAAACAGTCGA
TCAAAGAACCGAGAGAATTGAAACCTATAGTGGTGATTCTGTTGATGCCA
TACTTGTTCAATTACATTGATGTGGTTCTGGAAGTCTCCTCGATGATCAG
TCGCTTGTCTTTGGAGCACCTGAGTGTTCTCTCGTCATTTATCGCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000343_pilon | genome | sc0000343_pilon:84323..85971 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1624-1647:1626 |
| Aaloc | 1-1623:1 |
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