XLOC_016393 (mRNA) -

Overview
NameXLOC_016393
Unique NameXLOC_016393
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000343_pilon:72851..73822+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_016393 ID=XLOC_016393|Name=XLOC_016393|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=972bp|location=Sequence derived from alignment at sc0000343_pilon:72851..73822+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTAACAACACAACAGTTGAAGAATGTATGACGTCATATTCTGGTCG TGTTTATATGTCGAGTGATCAAATCAACTTTCTTATCGCTTACGATATAG CCACTGGGTTTTTCAACTTCCTAGCTAATGGACTAGTCATTTTCGCTCTC GTACTATCAAAGCAGACTGGAAACCCGTCTCTGAAACTCATTTTCTTGCT CAGTGTATCAGATTGCTGTTTAGCCGTAGTCGTGCAAAGTCTTTTCGCTG TGATGATGTTCAAATTTCCACACACGCAAAACTGTACCTTTGAAATGATG ACgcaattttttggaatattttttactCACACTTCAGGCTATATTATTGC GTTGATTGGCTTTGATAGATACGCTCGAGTCAAATTTCTTacgaaatatt caaatattatgacctcaAAGAGAGTTAAAATTCTCGTTATCATTGTCATT TTGCTATCAGTAGTTCAAGCTACCCTTTACGTGCTTGGAACAACATTCGG TATTTTCGACAAAACCAAGAAGATAGGCGTTGCCGTTGACTTCATTGTCG TTTTATCAGTTGTTATAGTAACCATAATGGCGGTCTGTGCAGTGAAGTCA CATCGTCGAAATGCTGGTGATCAATCAATGATGAAAGCTGTCGATCAAAC AGTGACTCGCCTCGCTTCCAAAATCCTGCTGACCATCATCATTTTTTACG TCATCTATGTTATCATAGCTTTCTTGCATTCCGCTCAGGCGGATAAATCG ACGGGCGCCAAACGCTCTTGGTTGGAATTCGGTGTGTTTCTAGGTTACCT GCTAACCTACACCAACTCTTTGGTTAACGCTCTTATCTTTCTTAGCGTTA ACAACAAAGCGAGGATGGAACTTTTGAGGAGAACCTTTAAAGGCAGAGAT TCCAAAGACGATCACACTGGATCAGTATCTAAGAGCAACACTCAAGAGAT CTCAATAAAAGACTTATCTTGA

Coding sequence (CDS) from alignment at sc0000343_pilon:72851..73822+

>XLOC_016393 ID=XLOC_016393|Name=XLOC_016393|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1944bp|location=Sequence derived from alignment at sc0000343_pilon:72851..73822+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTAACAACACAACAGTTGAAGAATGTATGACGTCATATTCTGGTCG
TGTTTATATGTCGAGTGATCAAATCAACTTTCTTATCGCTTACGATATAG
CCACTGGGTTTTTCAACTTCCTAGCTAATGGACTAGTCATTTTCGCTCTC
GTACTATCAAAGCAGACTGGAAACCCGTCTCTGAAACTCATTTTCTTGCT
CAGTGTATCAGATTGCTGTTTAGCCGTAGTCGTGCAAAGTCTTTTCGCTG
TGATGATGTTCAAATTTCCACACACGCAAAACTGTACCTTTGAAATGATG
ACgcaattttttggaatattttttactCACACTTCAGGCTATATTATTGC
GTTGATTGGCTTTGATAGATACGCTCGAGTCAAATTTCTTacgaaatatt
caaatattatgacctcaAAGAGAGTTAAAATTCTCGTTATCATTGTCATT
TTGCTATCAGTAGTTCAAGCTACCCTTTACGTGCTTGGAACAACATTCGG
TATTTTCGACAAAACCAAGAAGATAGGCGTTGCCGTTGACTTCATTGTCG
TTTTATCAGTTGTTATAGTAACCATAATGGCGGTCTGTGCAGTGAAGTCA
CATCGTCGAAATGCTGGTGATCAATCAATGATGAAAGCTGTCGATCAAAC
AGTGACTCGCCTCGCTTCCAAAATCCTGCTGACCATCATCATTTTTTACG
TCATCTATGTTATCATAGCTTTCTTGCATTCCGCTCAGGCGGATAAATCG
ACGGGCGCCAAACGCTCTTGGTTGGAATTCGGTGTGTTTCTAGGTTACCT
GCTAACCTACACCAACTCTTTGGTTAACGCTCTTATCTTTCTTAGCGTTA
ACAACAAAGCGAGGATGGAACTTTTGAGGAGAACCTTTAAAGGCAGAGAT
TCCAAAGACGATCACACTGGATCAGTATCTAAGAGCAACACTCAAGAGAT
CTCAATAAAAGACTTATCTTGAATGCTTAACAACACAACAGTTGAAGAAT
GTATGACGTCATATTCTGGTCGTGTTTATATGTCGAGTGATCAAATCAAC
TTTCTTATCGCTTACGATATAGCCACTGGGTTTTTCAACTTCCTAGCTAA
TGGACTAGTCATTTTCGCTCTCGTACTATCAAAGCAGACTGGAAACCCGT
CTCTGAAACTCATTTTCTTGCTCAGTGTATCAGATTGCTGTTTAGCCGTA
GTCGTGCAAAGTCTTTTCGCTGTGATGATGTTCAAATTTCCACACACGCA
AAACTGTACCTTTGAAATGATGACgcaattttttggaatattttttactC
ACACTTCAGGCTATATTATTGCGTTGATTGGCTTTGATAGATACGCTCGA
GTCAAATTTCTTacgaaatattcaaatattatgacctcaAAGAGAGTTAA
AATTCTCGTTATCATTGTCATTTTGCTATCAGTAGTTCAAGCTACCCTTT
ACGTGCTTGGAACAACATTCGGTATTTTCGACAAAACCAAGAAGATAGGC
GTTGCCGTTGACTTCATTGTCGTTTTATCAGTTGTTATAGTAACCATAAT
GGCGGTCTGTGCAGTGAAGTCACATCGTCGAAATGCTGGTGATCAATCAA
TGATGAAAGCTGTCGATCAAACAGTGACTCGCCTCGCTTCCAAAATCCTG
CTGACCATCATCATTTTTTACGTCATCTATGTTATCATAGCTTTCTTGCA
TTCCGCTCAGGCGGATAAATCGACGGGCGCCAAACGCTCTTGGTTGGAAT
TCGGTGTGTTTCTAGGTTACCTGCTAACCTACACCAACTCTTTGGTTAAC
GCTCTTATCTTTCTTAGCGTTAACAACAAAGCGAGGATGGAACTTTTGAG
GAGAACCTTTAAAGGCAGAGATTCCAAAGACGATCACACTGGATCAGTAT
CTAAGAGCAACACTCAAGAGATCTCAATAAAAGACTTATCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_016393XLOC_016393-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000343_pilongenomesc0000343_pilon:72851..73822 +
Properties
Property NameValue
Aaloc1-972:1