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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000343_pilon:50875..54073+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_016392 ID=XLOC_016392|Name=XLOC_016392|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3199bp|location=Sequence derived from alignment at sc0000343_pilon:50875..54073+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTATTTTATCGCTGTTTTATACCTTGCTTACATTGCAACTGCTTC
GGCAGATAAggtatgtatttttttcaatttgttgaTGTTTTCAAGTGAAA
AACCTGCTAGAAATATGAAAAGTATAGCTAGAAATTTGTAAACTGTAATC
AGAATCCATTCTTCTTTATGTATTGTCTTAACAGCGATGCCTGATTTGTT
CGTCGTTGCTCATATCTTTCAATATTCATAATTTATCCATAATATCTTTC
CACTAGTGCACCGATGTTTACGACTCCTGTGTCAACGCCACCGGTAGCGA
CCCCATGTCACGATTCAAATGTGGAATGAAATATTTGAGATGTCGATTCA
ATGACATGAGAAGTGATGAAGAGATTGCTGATGAACTTTTTGACGGAGAA
GACAAACCTGAAGTAGATTTTACCTCTTACTCTGTTGCTTTTAATAAAGT
TTTAAGGTTTCCAGGACAAAAAAGCCTTATAGAATTCGTCCTTAGTGAAT
AAATCTTTATTAGTACTTGCTACTGCTACTGttgaaaaaaggtaaaatta
GGGCGGCGTCAAATACAAGCAATTTAGACTGGAATGGTATAAATCTTTTA
TTTCGATTtgtaaattatcttttcattATAGTGTAAAGTTGGGTTCGTCG
ATTGCATGAAAGCCGCTCAAAAAGCAGAAGACAAAATGGCAGCCAGAAAA
ATGtgcatcaaaaataaatatgtttgcGCCAAAGAAAATGCCAAGGAAAA
ATATGCCTGTCTTAAGAAGGTAATGAAGACAACCTACATTACCTAAATAC
GTAAAATCAACATCTAGTAAGCCTAAAAATCTTTGCAAACGTTATGTGTT
AACTTGAGATAAAGATATTGAGTTTTCCTAACTTAAATTTTACTATGCTT
AAATGTAGATTTTAAAAGTCAAATACCTCGTTGCAATTTTCTTTGAGACA
ATGAACAGTTTTACAcgcctgtctcacagccccggtggaactttttccca
cagtggggataaaaatttatatcgaataatcccaatggggatagatatTC
CATTGTTCCCGAGCTTAAAGCTaatttttctattgaatttcgaatgggga
tgaaatcaaagtcaattttccagtggagctgaaattgTATGGTATTTATT
CCTCCAGGAAccaaattttgggcaaatttttcagtggggctggggtccca
gcgggtctgtgacacgggtgtattttaaattttttgatttatgatcAGTG
CAAAGATGTTGACGGAATGAAAGAAAAGATGAGATGCGCTGCTAAATGTt
tcaagaaagaagaagaagaagaagccgCTGATGAACTTTTTGATGAAGGA
GACAAAGTATGTTTTGAATATCTTACCAAACGAGTTTTATGTTTGAAACT
ATCAGCGGCAGAAGAATACGACCGATAAAGTAGACTGACTTTAATATTGT
TAATACTTTTTCCAAATTGAGGTATCAGCTTTCTATCaaagtttgttttt
caataCTCATAATTTATCCCTGATATCTTTCCGGTAGTGCACCGATGTTT
ACAACTCATGTGTCAAAGCCACCGGTAGCGACCCCATGTCACGATTCAAA
TGTGGAATGAAATATTTGAGATGTCGATTCAATGACATGAGAAGTGATGA
AGAAATTGCTGATGAACTTTTTGATGGAGAAGACAAGCCTGAAGTAGGAC
TCATTTTCGTAATTTGTGCCCTTTAGTAAAGATTTAAGGTTTCCAGGACA
AAAAGACCTTATAGAAATCATCCCTAGTGAATAAATCTGCTTGCCTATTA
GTGCAACGCATTTTTACATTTGATTCATTTTGAAACACAGTCGAGGATAT
AAATCTTTATTAGTACTTGCTACTGCTACTGttgaaaaaaggtaaaatta
GGGCGTCAAGTACATGCAATTTAGACTGGAATGGTATAACTttttgcccc
gcaggggcttttgttcggatttgctcgccagaaaaatattcatgttcaga
ttcatgttgtttcttccgattctgagcggCCCGCCGCGGTTAAAAATGTT
CGCGCGCACCTAATATTATATCTCTTTTGTTGCTACTTGGTACTtattat
aagaatcaaatcaataactcttgattgaaaaccatatacctttcggtaat
tagttcttacaaagtaaacaaaggatggcaaaaaaattgagcatatttat
ttttattataagcattttctttataagaatcaaatcaatatctcttgatt
gaaggcaatatgcctttcggtaattagttcttacaaagtaaacaaagtat
ggcgaaaaaaattagcatatttatttttattataagcatctactttataa
gaatcaaatcaataacccttgattgaaggcaatatgccttcggtaattag
ttcttacaaagtaaacaaaggatggcgaaaaagatgagcatatttatttt
tattataagcattttctttataagaatcaaatcaatttcagaatttttgg
cgttttcactgtgataacatgtgagcgataacttctctttttgagatgtg
agcgaccgtctatcccgtgtcatctcaaaagtaaatttgaaaccaagctt
tcttcctgcgacttaaattttatcgataaaacgaatttaaaatctacaca
tgcgaTGCGTTATTTTGCTTAGGGATTTTCGAaaggaagctctgcggggc
attcttagcgacagctacttgctagtttatTTTGAGTTGTAAATGGTCTT
TTCATTATAGTGTAAAGTTGGGTTCGTCGATTGCATGAAAGCCGCCAGAA
ATGCAGAAGACAAAATGGCAGCCTCAAAAGTGTGCTTCGAAAAGAAAGCT
GCATGCATCAAGGACAAACTTCAACCAAAGATCGACTGCGTTAATAAAGT
AAatcaatattattttatttacatCCCaaaaaaaTAAACCGCCGTCCATT
CTTAGATTTGTGCAAAATTAAGTATTTCTTGATCCtgtaaaattattctt
attctGTAGATCGAGATACAGTCTAAATCAATTGGTTCAATTTACAATTG
gaaattttccttgtttttacaTATTGATACTCTACTCTCTTTTATTTTAG
TGCCGTGAAGAGCTTAAATCTTGCAGAGCTGATGGATCAAGCAGAATGCA
ATGTGGATACAAATTCTACAAGTGTGTCAAGCCATGCAAAGACGCATAA Coding sequence (CDS) from alignment at sc0000343_pilon:50875..54073+ >XLOC_016392 ID=XLOC_016392|Name=XLOC_016392|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1710bp|location=Sequence derived from alignment at sc0000343_pilon:50875..54073+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTATTTTATCGCTGTTTTATACCTTGCTTACATTGCAACTGCTTC
GGCAGATAAgATGAAGTATTTTATCGCTGTTTTATACCTTGCTTACATTG
CAACTGCTTCGGCAGATAAgTGCACCGATGTTTACGACTCCTGTGTCAAC
GCCACCGGTAGCGACCCCATGTCACGATTCAAATGTGGAATGAAATATTT
GAGATGTCGATTCAATGACATGAGAAGTGATGAAGAGATTGCTGATGAAC
TTTTTGACGGAGAAGACAAACCTGAATGCACCGATGTTTACGACTCCTGT
GTCAACGCCACCGGTAGCGACCCCATGTCACGATTCAAATGTGGAATGAA
ATATTTGAGATGTCGATTCAATGACATGAGAAGTGATGAAGAGATTGCTG
ATGAACTTTTTGACGGAGAAGACAAACCTGAATGTAAAGTTGGGTTCGTC
GATTGCATGAAAGCCGCTCAAAAAGCAGAAGACAAAATGGCAGCCAGAAA
AATGtgcatcaaaaataaatatgtttgcGCCAAAGAAAATGCCAAGGAAA
AATATGCCTGTCTTAAGAAGTGTAAAGTTGGGTTCGTCGATTGCATGAAA
GCCGCTCAAAAAGCAGAAGACAAAATGGCAGCCAGAAAAATGtgcatcaa
aaataaatatgtttgcGCCAAAGAAAATGCCAAGGAAAAATATGCCTGTC
TTAAGAAGTGCAAAGATGTTGACGGAATGAAAGAAAAGATGAGATGCGCT
GCTAAATGTttcaagaaagaagaagaagaagaagccgCTGATGAACTTTT
TGATGAAGGAGACAAATGCAAAGATGTTGACGGAATGAAAGAAAAGATGA
GATGCGCTGCTAAATGTttcaagaaagaagaagaagaagaagccgCTGAT
GAACTTTTTGATGAAGGAGACAAATGCACCGATGTTTACAACTCATGTGT
CAAAGCCACCGGTAGCGACCCCATGTCACGATTCAAATGTGGAATGAAAT
ATTTGAGATGTCGATTCAATGACATGAGAAGTGATGAAGAAATTGCTGAT
GAACTTTTTGATGGAGAAGACAAGCCTGAATGCACCGATGTTTACAACTC
ATGTGTCAAAGCCACCGGTAGCGACCCCATGTCACGATTCAAATGTGGAA
TGAAATATTTGAGATGTCGATTCAATGACATGAGAAGTGATGAAGAAATT
GCTGATGAACTTTTTGATGGAGAAGACAAGCCTGAATGTAAAGTTGGGTT
CGTCGATTGCATGAAAGCCGCCAGAAATGCAGAAGACAAAATGGCAGCCT
CAAAAGTGTGCTTCGAAAAGAAAGCTGCATGCATCAAGGACAAACTTCAA
CCAAAGATCGACTGCGTTAATAAATGTAAAGTTGGGTTCGTCGATTGCAT
GAAAGCCGCCAGAAATGCAGAAGACAAAATGGCAGCCTCAAAAGTGTGCT
TCGAAAAGAAAGCTGCATGCATCAAGGACAAACTTCAACCAAAGATCGAC
TGCGTTAATAAATGCCGTGAAGAGCTTAAATCTTGCAGAGCTGATGGATC
AAGCAGAATGCAATGTGGATACAAATTCTACAAGTGTGTCAAGCCATGCA
AAGACGCATAATGCCGTGAAGAGCTTAAATCTTGCAGAGCTGATGGATCA
AGCAGAATGCAATGTGGATACAAATTCTACAAGTGTGTCAAGCCATGCAA
AGACGCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000343_pilon | genome | sc0000343_pilon:50875..54073 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 757-855:3101 |
| Aaloc | 619-756:2761 |
| Aaloc | 463-618:1538 |
| Aaloc | 355-462:1249 |
| Aaloc | 217-354:632 |
| Aaloc | 61-216:257 |
| Aaloc | 1-60:1 |
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