XLOC_016355 (mRNA) -

Overview
NameXLOC_016355
Unique NameXLOC_016355
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000337_pilon:44500..45759-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_016355 ID=XLOC_016355|Name=XLOC_016355|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1260bp|location=Sequence derived from alignment at sc0000337_pilon:44500..45759- (Clytia hemisphaerica_ch_hm2_pilon)
CTCAACTTTGCCAAGAAGAACCGTGGTAAGAAACCTTTAAATTCACAAAA CATCATACCTTCTCGTCTCACTCGTCGTCACTGTGCTTCCAAGGTAGCTG AACTCTTTGATTTAACTGGCAAGGTTGCACCACTGATCGCATCAATGAAG ATAGATCTTCAACACCTACTACATCATCAACTGGACTGGGATGACCAAAT TCCAGACAGCCTTCGACCTCTTTGGGAATCCAATTTCGAAATGATGAAAG AGATTGGTCAACTTAAATTCAAACGAGCCATCATTCCTGAAGACGCCGTC AACACAGATATCAATACAATCGACTTCGCTGACGCTAGTCAATCAATGGC CTGTGTTGCAATATACGCCAGATTCCTTCGACAAAATGGAGAATACTCAT CCCAACTGATATTCGCTCGAACAAGAACGGTCAAAGATCTTACTCAACCA AGAGCCGAGCTGTATGCTGCCCTCATCAACTGTCACACCGGTGAGATAGT AAGACGATCCATCTCCAAATGGCACCGCTCATCAATCAAGTTAACTGACA GCCAAATCGTCCTACACTGGATTGACAATGACGAAAAACCTCTGAAGAAA TGGGTCAGAAGCAGAGTCGTCGAAATCAAACGTTTTACATCCAACGATCA ATGGCATTACGTCGACACATCAAACATGTTAGCAGACATCGGAACTCGAA GAGGATCCAAACTCAACGAAGTCGACAAAGATTCCAAATGGATAAATGGC CACGACTGGATGCATCTCGACCAAAACTCATTTCCAATCAAATCAGCCAA GGAGCTCAAACTAACTGAACGTGAAATGGAAGAGGTGCAGAAAGAAGTCC AAATCAACATCCATCATGCAGAGTGCCCAACGAAAGAATTCGAAAAGAGG TATACGTTTTCAAATTACCTTCTAGATCCAAACTACAGAAGCTTCACCAA AGTCACCAGAATCATGGCTTACGTCATCCGCTACTTCAAAAATCTACGTT CAAAGAAGTACTCAACATCAACTCCAAACATCGTCATCAAAGAAGTGCCA CAACTCACTGACGAGGAAATATCTGCTGCTGAACACTATTACTTCAAGAA GGCAGCCGATGAAGTACGACAATTTCTTCCTCCAAAGAAATTTGAACCAA TCACCACATCAAAGGATGGTATCCTACTCTACAATGGTCGAATTCTACCA AGCAACTCAATCACAATTGTTGGTCGATACACAGAAGCAATGTTGGACCT CATTTCATCA

Coding sequence (CDS) from alignment at sc0000337_pilon:44500..45759-

>XLOC_016355 ID=XLOC_016355|Name=XLOC_016355|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2520bp|location=Sequence derived from alignment at sc0000337_pilon:44500..45759- (Clytia hemisphaerica_ch_hm2_pilon)
CTCAACTTTGCCAAGAAGAACCGTGGTAAGAAACCTTTAAATTCACAAAA
CATCATACCTTCTCGTCTCACTCGTCGTCACTGTGCTTCCAAGGTAGCTG
AACTCTTTGATTTAACTGGCAAGGTTGCACCACTGATCGCATCAATGAAG
ATAGATCTTCAACACCTACTACATCATCAACTGGACTGGGATGACCAAAT
TCCAGACAGCCTTCGACCTCTTTGGGAATCCAATTTCGAAATGATGAAAG
AGATTGGTCAACTTAAATTCAAACGAGCCATCATTCCTGAAGACGCCGTC
AACACAGATATCAATACAATCGACTTCGCTGACGCTAGTCAATCAATGGC
CTGTGTTGCAATATACGCCAGATTCCTTCGACAAAATGGAGAATACTCAT
CCCAACTGATATTCGCTCGAACAAGAACGGTCAAAGATCTTACTCAACCA
AGAGCCGAGCTGTATGCTGCCCTCATCAACTGTCACACCGGTGAGATAGT
AAGACGATCCATCTCCAAATGGCACCGCTCATCAATCAAGTTAACTGACA
GCCAAATCGTCCTACACTGGATTGACAATGACGAAAAACCTCTGAAGAAA
TGGGTCAGAAGCAGAGTCGTCGAAATCAAACGTTTTACATCCAACGATCA
ATGGCATTACGTCGACACATCAAACATGTTAGCAGACATCGGAACTCGAA
GAGGATCCAAACTCAACGAAGTCGACAAAGATTCCAAATGGATAAATGGC
CACGACTGGATGCATCTCGACCAAAACTCATTTCCAATCAAATCAGCCAA
GGAGCTCAAACTAACTGAACGTGAAATGGAAGAGGTGCAGAAAGAAGTCC
AAATCAACATCCATCATGCAGAGTGCCCAACGAAAGAATTCGAAAAGAGG
TATACGTTTTCAAATTACCTTCTAGATCCAAACTACAGAAGCTTCACCAA
AGTCACCAGAATCATGGCTTACGTCATCCGCTACTTCAAAAATCTACGTT
CAAAGAAGTACTCAACATCAACTCCAAACATCGTCATCAAAGAAGTGCCA
CAACTCACTGACGAGGAAATATCTGCTGCTGAACACTATTACTTCAAGAA
GGCAGCCGATGAAGTACGACAATTTCTTCCTCCAAAGAAATTTGAACCAA
TCACCACATCAAAGGATGGTATCCTACTCTACAATGGTCGAATTCTACCA
AGCAACTCAATCACAATTGTTGGTCGATACACAGAAGCAATGTTGGACCT
CATTTCATCACTCAACTTTGCCAAGAAGAACCGTGGTAAGAAACCTTTAA
ATTCACAAAACATCATACCTTCTCGTCTCACTCGTCGTCACTGTGCTTCC
AAGGTAGCTGAACTCTTTGATTTAACTGGCAAGGTTGCACCACTGATCGC
ATCAATGAAGATAGATCTTCAACACCTACTACATCATCAACTGGACTGGG
ATGACCAAATTCCAGACAGCCTTCGACCTCTTTGGGAATCCAATTTCGAA
ATGATGAAAGAGATTGGTCAACTTAAATTCAAACGAGCCATCATTCCTGA
AGACGCCGTCAACACAGATATCAATACAATCGACTTCGCTGACGCTAGTC
AATCAATGGCCTGTGTTGCAATATACGCCAGATTCCTTCGACAAAATGGA
GAATACTCATCCCAACTGATATTCGCTCGAACAAGAACGGTCAAAGATCT
TACTCAACCAAGAGCCGAGCTGTATGCTGCCCTCATCAACTGTCACACCG
GTGAGATAGTAAGACGATCCATCTCCAAATGGCACCGCTCATCAATCAAG
TTAACTGACAGCCAAATCGTCCTACACTGGATTGACAATGACGAAAAACC
TCTGAAGAAATGGGTCAGAAGCAGAGTCGTCGAAATCAAACGTTTTACAT
CCAACGATCAATGGCATTACGTCGACACATCAAACATGTTAGCAGACATC
GGAACTCGAAGAGGATCCAAACTCAACGAAGTCGACAAAGATTCCAAATG
GATAAATGGCCACGACTGGATGCATCTCGACCAAAACTCATTTCCAATCA
AATCAGCCAAGGAGCTCAAACTAACTGAACGTGAAATGGAAGAGGTGCAG
AAAGAAGTCCAAATCAACATCCATCATGCAGAGTGCCCAACGAAAGAATT
CGAAAAGAGGTATACGTTTTCAAATTACCTTCTAGATCCAAACTACAGAA
GCTTCACCAAAGTCACCAGAATCATGGCTTACGTCATCCGCTACTTCAAA
AATCTACGTTCAAAGAAGTACTCAACATCAACTCCAAACATCGTCATCAA
AGAAGTGCCACAACTCACTGACGAGGAAATATCTGCTGCTGAACACTATT
ACTTCAAGAAGGCAGCCGATGAAGTACGACAATTTCTTCCTCCAAAGAAA
TTTGAACCAATCACCACATCAAAGGATGGTATCCTACTCTACAATGGTCG
AATTCTACCAAGCAACTCAATCACAATTGTTGGTCGATACACAGAAGCAA
TGTTGGACCTCATTTCATCA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_016355XLOC_016355-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000337_pilongenomesc0000337_pilon:44500..45759 -
Properties
Property NameValue
Aaloc1-1260:1261