|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000242_pilon:121300..128762- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_016317 ID=XLOC_016317|Name=XLOC_016317|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7463bp|location=Sequence derived from alignment at sc0000242_pilon:121300..128762- (Clytia hemisphaerica_ch_hm2_pilon)
CAGGGGTCTGGTACGAGCAAGAAAGGAAACTTGGTCATCACCAGTTGTTG
TGGCAACAAAGGAGAAGACAGGACAACCTCACCAACAAGTATACAGCAAT
TAAAACAACCTGTCGCACAACACCAAAATCCTCCTAAAGAAGGAAGGAAT
TCATCTACTGAAAACACGTAAGTGAAATTTGATATTTTAGTAAGCTGTAG
TAAATTGAAATTCGCAAAAAGTTTTGCCAAATTATTTGATATCTTTAATA
CCCTATCAGCCATATCAGTGATTCTCTAAATTTAGATTAGTTTAAATGCC
AGGAGCGTGGGTATTAAAACAATCTAAATGTAGAAAGTTTTAGAGAGAGT
CAAAATATTACTCATTTTTTGATAGAAAGGAAATTATTTCAGGGGTCTTA
ATAGGCGCCAAAGGCGATTTGGTTATAGTTTTTAAAAAGGAAAATGATGT
TTGTTTTGTTTTAGAAGCTTTAACATAGATTTTAAAGTTCTTGAAAACAA
ACATAAAGTTGTAAGTCAAAACAAACAAAAATGAAACATGAATGAGAGGT
TGACTTGAAAAACAAATTTAGCAGGGACATGGAAAGTAACACAACCTGAC
GAAGCAATTATGACCTAGAGAGCTCGGGTTGTTTTATTGTTGGTAGAAAT
ATACTTTAATGGGTTCATGGCAATATCAAATCAAAAGTTATTGTGAGCAA
AAAGTGGAAATAGATTATTCTGAACAAAAATTTACATTCTATTGAATTAG
CTGGGTCCTACTTATTTACATAATCAGACATAATTCAAATTTTATTTAAA
TAAACTTAAAAGAATAACCAGAGAGAAAGTTTGAGATCTGCTTTTGGACT
AAAGAAACCCTCTGTGAGACCCTCGAAATATTTTTAGTCAGGTTGCTGGA
CCACTTTTTTAGAAATCTTAGTGCGAAGAATCTAAAACCTTTTGGAACTT
GTTATATAACATCAAAGGATTCAGAAAAATTTTACTGGCCATTTTCTATC
CACCTCCTTTACTCGTTTCCAGGTCTTTTTAAGATTTTGTGACGTCATCA
GGGCGGTCAAGCTAAGGTGAAATTTGAACCTCCACAAATATGGTGATATT
ATACATCGTTGGATCGGAAATTTGATGTAGATTTCAAAAAAAGTTTATCT
CATAGGGTAAAAATCAAGTGAAAAAGGATTATTAATGCAGAAAGTGACCA
ATATGACGTCATAGTTAATTTTTGCTTACAAAATCACAGAATGATTATTC
GATGTTCTTGAATAGCTTAGACCTAGACGTTATACTTGGAAGTCAAGAGT
GTTTATTTATGGTACGGCAATTTAGCTGATTAATCAAAGGGAAGGAATTT
CCACTAAAAAGCCCTTTTCTTTTTATTTTGTTATCAGTATCATTCCTTCC
ATTTGGGCTTAAGATAGATACTTTATCATGACTTTCTCAGCCCGGGAGAG
CATTCCAGGAAAACGACATACCGTAAGTGCGGCCCTTAAGGGTTCCTTTT
CCAAGCTTTCTTTTCAAGTGCATTGTAAGGGTCGAAAAAAAATCGTTTTC
TAATTCAAATTCATACCCTTTTTTACCTTAAAATGGTAAAAGAATATTCA
AGAAATTGCCCCGCAAGGGTCGATGTGTCGCCCAAATTTACTCAAATCTG
CCTAAATTTTCTCTGTACTGTAAGGGTCAGGATTCGAAGCCCTAATTTTG
GGCCGCTCGTACAGTCGTTTTTTGAAACGAATGGCCCCTGGGACTATCAG
GGTATTTACGGACCGGACCGGTCCTCTGACCTTAGAAACGCTAAACTTTT
GCGAAAAAGTCACCCTTAGAGAGATTCTTTTGACACTCATCGCTTTCGTA
TCCTTAAAAGGACCCAAAATGGGAGAAATCCCAACCCTTCGAGAGAATAT
TTTGACTTTTCGTAACCCCTAAAAACCCCTGAAAAAAGTGATATATACAG
ATTATCGGACTTCGATAAATCGGTAAAAAAGTGACCCTTTGAGAGACGAT
TTTTCTCGGGGGGGGGGGGGCAAATGGAGGGTATGGGTGCGTGCCTTGGA
CTTGCAAACTCCCATTAATGGTTGCAAAAATCACAAACTCAAATTTTAGT
CCCACTATGGGTCGGGAAAATTTTTCCCCTCCCTCTAAGTCCCGCTAAGG
GTCCGAAGGTCAAAAGTCGGGTGGCACACCCCCGTCGCCTTGTAACCCTA
GAACACCCCGGATGTGTTCTTATCTTCTAGGATACCACATGTCATGATTC
TAAAAGCCTGAACTGTTTTTGTTAAATAATGAGTTTTGGGGACAAATTTA
CTTTGATCGGGTTAAAGTGCGATGACTGCTAGATTTTTGGTTCAGTATTT
GTTTGACTTTGTCCGATAAATTTTGATTATTCGATTATTCGATCTAGGAA
CAACTTTTTGCCTGCATACACTTTTTCCCATGAACTTTTGCCGCGTTACT
AACAAAGGACACGTCAATTTTAATTTGATTACCTTATCGGCCAAAACTTA
GTCGGCCTTAATTATTAGTCGGCCCTAAAATTTTAGTCACCTCATCAAAA
TTTAGTCACTTAGGGCCGTCCCTTTTTGCATGTTCAGAATTATGCTATAA
GGGTTGCCCCCCCCCCTCAAAAGAAGGGTCGTAAAAACAGCTAAATACAA
TTTCTTGACTCTTGAAAGCCTAATCCTAATAATAAGCTTCCCAAAATTTA
AGAAAAGTCGGGTTTAGAGGCCCAACCTTAAAGTCGGAACTTTGGATTTT
TATAAGCACACGGTCTCCTCTTCGGCGATTCATATTTTGTTTTATATGTT
TTTTTTGACTCGTTGTCGGACAAAATTGTTGTCGGAATACTGACGCATTC
GTCAAATCAAACGTCGGGCATTTTTACTGTCGGACTAGAAAGTGTCGGAC
TACTGACGACCTCCAATCAGAATATATCAATACGAAAAAAGCTCAATCGA
TATTAGATAGCTATTCTTCTGCCACTATTAGGGTTGACTTTGTTGCCCGC
TTTTTTGTTTATAAAAAAAAGTTCGAAGCTTGAGCTACCATTTCGCATTC
GAAAAGTTGTATGTATTGCTACACATTCGTATCTATTAAAAAAAACGGGG
GTTTGATAAATTGTAAGTGTTTTTGAAAATGTTGTATTTATAATAATTTC
TAAATCGTATTCTGATGAAATCCAATTCTTTTGATCAAGAATTAATATCA
AAGCGCTTTTTGAGTTTAAGTGCGTGTAATAAGTATCAAAGGTGTGTTTG
TGTGATTTCTTACCCCCGTCTAAGAATTCGAACGTTTTAATGTTTACATT
CTATTCTATTACAAAAGCAAAGAGGGAAGACAACATGGCGTCAGAAAGTT
CACTGACAACACTTTAGAGTATTTGGTGTAAAACTTTTATCTGTAACTTT
GGATAAAGGTAGAATTAGAATGTCCAGTAAAGGGAAATGATTTAAGTAAA
GTATGAAGAATAAAATGTGCATCAAATTAGATTCTTCGCAGTGAGGTTAA
CTAAACTTGAAATTTTTGAGGTCCAGCAACCTGACTATTTGGCCAAGCTT
CTTCCAAAGTTGAGATTATGAAAATTTGAAATCTCTAAAAAGGTAACTAA
AAGTGGATTCTTTTATAACTCGAACGTTCAAAAATTATATTGTTTTCTTT
GATTTCATAGCTAATACTTTAGTATTTCGATTTGAGAAAAAAATTAGGGA
GAAATCGGTGGTGGACCATGAAAGGAATTTTCAGACCAAAAGTCTTTATT
AAACCATCTGACTATAAATAACTTTCATAAATTAAACTTACTCTAAGGGA
ACTAATTTTTGTGGGTGTTAATTTTCACTTTTTTCGCAGTTTTTGTCAGC
AGAGAGATGCAAAATAATGTCTATGGTGGTTGTGCTAGAAAATGGACCAT
TCTTTGCAATGGTAAATATTTTGGAAAGGCCATGAGAAAAACCAATTGAA
ACTAACTGGATTAAACTGAACTGAAACTGTCAACAACTGCCCTTCATTTT
ATTTTTTATCAAAGGAGCAAAACTATTATGAAATATTTATCAATTTGATC
AGATTTTATCAAAAAATAAATTAAATGAAGTTTTTTTTTAGGTTGACAGA
TACAGAAAGGTTAGGTATTTAATCTGATTCAATAAAAAAAGAGTCATTTT
TTAAAGAAATAAAAAAATATAGAAAACTGTAGAAAAATGAATTTCAATGT
ATTTTGGAAGAGCAATGAGGCAAGTCAAGACCACTGATACATACAGAATC
GTTATTTGCAAAGTTTTGACACATAATGGGTGACTTTGGGTCTTGCCGGT
GTCTAAGAGGACTCGCAGAGATTTTTCTAAGCATTGTTAGCTGGGTCCGT
TTTTGTAAAATTTAGATTTAGTTTCTAATTGCTCAGCAAAGCTGTGCACT
GATAAAGCTGGTGGTCCCATTGGGTCCAGGACAAAGTCCTGGTGGAGATT
CAGAGGGTGAAACTCCCGAAAGATTTTAAATATAAGTAGATGATATCATT
TATCTTTCTCTTGTGAACAACAAAAAGTTGAATTTCGTTAGAAAATTTTG
GATCTAGTTTCAAAAGTCTTTTGATTTGTTATTTTGGCCGGTATACAAAC
ATAAAAAAGTGCTTAGAAAAAAATAACGATTCCATGTGGGTGGGACAAAA
TGTCTGATCAGGGTTGCTTTAGCTTGAAAATCATTATTTTTTGTCTGACA
AGGAGCGATGTCCGACCGTTATTTCAGACCCTGAGAGGAAAGTTAATCTT
AAAGTTAAAACTTTTTGAATTTGGTCTCAGTATTAAAAAGTAGTTAGGAA
AACTTTGAAAGTGAAATTAAGATCCAATTTCTTTAAACCCACCACAGAAC
TTGTCCATGTAAATGATAAATTCATAGCAGAATTAAAAGCCATCAAGGAA
TTTCTTTTGATAGCTCAAGGGATATCCTCTTAAAAAACTTAAGCACCCAA
CACATCAATCACTTTTATTAATGACTTTTTAATTAATGAGAAATCCTGTT
GTGTTTTAATGAAAACATGATATGTTCATAGTTGTTTTAGGCCTGTGGTT
TTTTTCATATTGCAGATGTAATATACAGTTTAGATAGGGTGCAAATTATG
AAGCAGAACTATGATAGAAATGATGAGTTTTTTTTAAATAGTCTCAAATG
AATTGGAAGAAGTTTTCATAGAGAATTCATGTTTTTTTTCTTTTTAATTT
CAACACTTTAGAGTACCCAAGAAAGTTGACAAGGTGGGAGAAATAGTGAG
GAAAAGTTAGAACGATTCTGAGATCTATGAGTGTTTTTGAAAAAATAAGG
GCTCGTTTTACAAAATGATGAAATAAGTTATAATTTTGGTGAGTTAGCAA
TTTTTTGATTTTATTGATAATTTGCTAATATTCGCAAATTTTGCTTGAAG
AAAGTAGTTCCCCCCAAATAATACCTTTTGAGGTATTATTCACTAGGTTA
AGCAAACGAAAACAATGAAAGGAAAGTGTCACAAAGTCTTCTGAATTTTT
TTGAGAACCTAATCATTTTGATAAATGATATATTCATTTTAGATGAAAAT
CTTTAAAAAAATCTTTTTTGCTGGAAGCAGATTAACATTTTCTGAAATTA
GCACTCCCAAAAATATCCTGTTACAGAAGTGTATTCATCAAATTTCTTCT
GTTTTTAATTGTATGTATTTTTCCTTTGAAGAGGTAGACTTTTCTTTTTT
TCAAATCAAGTAAAATTACATATTAATGACCAAAGATCCTTTGAATGCGT
TCATTTTGCCGACAAATTCTCATGAAAAATTTAACAGGAAAATTGTTAAA
AATCTGAATTTTTAATTTTCAAGCAAAGGATTTTCACAATATTGGATTTA
TTCAGAAAATTGATACTTCGTTCAGTAACTTTGAATCTCATGATTATAAT
CTTTTCTTCAAATTCTTTTAGTAATTATCTTATTTTTCATTTGAAACTTC
AGATAACGCCATATTAATTGTTTACCTTGTGAAAACACTATATTAATTTT
TTAGCTTGTGAAGTGTGAAGTTGTAAAAAATAAGTTTACAAAAAATATTA
AATATTGCCTAGAAACTTTTCCAGGCAAGACCAATCTGATAGCTTTTGAA
GTGTGAAGTTGTAAAATAAGTTTACAGTATAAAAAAATATGAAATATCTT
TATTTGAAACATTTCAAATATCTAAGAAACTGTTGATAAACTTCTCACTT
TCTGTAAGCCATCTCTTTCAATAAAAACATTTAAGTAAAGTAATTTCAAA
TCAAGGTTTCAGATCAAACTGACTACAAGTCTCAACATAAAGGGCGATGT
TTGATTAATTTTTTTTTATTCAGGGTTTGAATGAAATCCAGGATGTAGAA
ATACAGTGTGTAGAAAAGAATATGACAAAATTGATACATAATTTTGTGAC
ATTTTCTTTTTGTTGTTTTCTGAATTGTTTTTAATCCAGAAAAATTCAAT
ACAAGTGCATTAGCTAAGGGCAAAATTTCAAAGTTCATAATTCGAGTGCA
ATATTCCTTGCTTGAAGAATGAAACCAGTTCCTAGAAGAGTTGTGCTAGA
ACCAGCTTTTTCAAATTTAGAAACTCTACCTAAGAGCACAATGAACGTGG
GAAAAGTTTTATGAAAAAGGAGAGATATTTTTTTATAACAGTTTGATAAT
ATCCACTCAGGCACAAAGCATAACAATCGTATAAGGGACAGATCAAAAGT
TTTAACTATTTGAAATACAAACTAAGTTGAAATTAACACGATATCTCCTT
TTTCTGTTTGCAGGCAAAATATCATCAACGTCAAACCAATACCTCAAGAG
CACAAAATGGGATCCGAAAGTTTTTACATTGATATCAACTTCAACTATGG
CAAATTATCCTACACCACGTTTTGGCGTGCTTGGGAAAAAGATGCTGGCT
TGAGAGACGCCATGCAACAAGGAGTTGTCACAAATCTGCTCAAAGTATCC
GGCGAAAACAAATTAATCATGATTGCAAAAATCAGTGGAGATCTACTGGA
CGATTTACTATACTCCAAAATCCAAGTCATTGCTTATTATGCAGATTTGA
TGAAAGTCTCAGTCACTCCAACATATGATTATGAATCATTTGCTAATATA
GTGAATACTATTACTCAAGTGGAGGAAACTTTTGAACAATTACCCTCTTT
AGATCAAAATACAGGTCTTTTCCATATCTTGGATATTAAAATGGAGTTCA
GAGGTATGACACAAGAGGATTTTCTCACCATCTGGAAAGAGGAAATCAAA
GCAGCGCTTGGAGCTAAAGAAAAAGGCATTGCATTGGACATATTGAAATC
AGTAGCAGAAAGACGTGTTTTTGTTTTGACACGTGTAGACTCTTTAGCCT
TATTAGACACTATTATTCTTACGCTACCAATGATGAGGAAAATGGGAGAC
CAGATGTATATCACATCTAAACGTGTTTCAAAATTCAATACCTTCATCAA
ACAAATCAATTAA Coding sequence (CDS) from alignment at sc0000242_pilon:121300..128762- >XLOC_016317 ID=XLOC_016317|Name=XLOC_016317|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1734bp|location=Sequence derived from alignment at sc0000242_pilon:121300..128762- (Clytia hemisphaerica_ch_hm2_pilon)
CAGGGGTCTGGTACGAGCAAGAAAGGAAACTTGGTCATCACCAGTTGTTG
TGGCAACAAAGGAGAAGACAGGACAACCTCACCAACAAGTATACAGCAAT
TAAAACAACCTGTCGCACAACACCAAAATCCTCCTAAAGAAGGAAGGAAT
TCATCTACTGAAAACACCAGGGGTCTGGTACGAGCAAGAAAGGAAACTTG
GTCATCACCAGTTGTTGTGGCAACAAAGGAGAAGACAGGACAACCTCACC
AACAAGTATACAGCAATTAAAACAACCTGTCGCACAACACCAAAATCCTC
CTAAAGAAGGAAGGAATTCATCTACTGAAAACACGCAAAATATCATCAAC
GTCAAACCAATACCTCAAGAGCACAAAATGGGATCCGAAAGTTTTTACAT
TGATATCAACTTCAACTATGGCAAATTATCCTACACCACGTTTTGGCGTG
CTTGGGAAAAAGATGCTGGCTTGAGAGACGCCATGCAACAAGGAGTTGTC
ACAAATCTGCTCAAAGTATCCGGCGAAAACAAATTAATCATGATTGCAAA
AATCAGTGGAGATCTACTGGACGATTTACTATACTCCAAAATCCAAGTCA
TTGCTTATTATGCAGATTTGATGAAAGTCTCAGTCACTCCAACATATGAT
TATGAATCATTTGCTAATATAGTGAATACTATTACTCAAGTGGAGGAAAC
TTTTGAACAATTACCCTCTTTAGATCAAAATACAGGTCTTTTCCATATCT
TGGATATTAAAATGGAGTTCAGAGGTATGACACAAGAGGATTTTCTCACC
ATCTGGAAAGAGGAAATCAAAGCAGCGCTTGGAGCTAAAGAAAAAGGCAT
TGCATTGGACATATTGAAATCAGTAGCAGAAAGACGTGTTTTTGTTTTGA
CACGTGTAGACTCTTTAGCCTTATTAGACACTATTATTCTTACGCTACCA
ATGATGAGGAAAATGGGAGACCAGATGTATATCACATCTAAACGTGTTTC
AAAATTCAATACCTTCATCAAACAAATCAATTAAGCAAAATATCATCAAC
GTCAAACCAATACCTCAAGAGCACAAAATGGGATCCGAAAGTTTTTACAT
TGATATCAACTTCAACTATGGCAAATTATCCTACACCACGTTTTGGCGTG
CTTGGGAAAAAGATGCTGGCTTGAGAGACGCCATGCAACAAGGAGTTGTC
ACAAATCTGCTCAAAGTATCCGGCGAAAACAAATTAATCATGATTGCAAA
AATCAGTGGAGATCTACTGGACGATTTACTATACTCCAAAATCCAAGTCA
TTGCTTATTATGCAGATTTGATGAAAGTCTCAGTCACTCCAACATATGAT
TATGAATCATTTGCTAATATAGTGAATACTATTACTCAAGTGGAGGAAAC
TTTTGAACAATTACCCTCTTTAGATCAAAATACAGGTCTTTTCCATATCT
TGGATATTAAAATGGAGTTCAGAGGTATGACACAAGAGGATTTTCTCACC
ATCTGGAAAGAGGAAATCAAAGCAGCGCTTGGAGCTAAAGAAAAAGGCAT
TGCATTGGACATATTGAAATCAGTAGCAGAAAGACGTGTTTTTGTTTTGA
CACGTGTAGACTCTTTAGCCTTATTAGACACTATTATTCTTACGCTACCA
ATGATGAGGAAAATGGGAGACCAGATGTATATCACATCTAAACGTGTTTC
AAAATTCAATACCTTCATCAAACAAATCAATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000242_pilon | genome | sc0000242_pilon:121300..128762 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 175-873:700 |
| Aaloc | 115-171:7356 |
| Aaloc | 1-108:7464 |
|
