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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000270_pilon:6322..10761- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_016264 ID=XLOC_016264|Name=XLOC_016264|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4440bp|location=Sequence derived from alignment at sc0000270_pilon:6322..10761- (Clytia hemisphaerica_ch_hm2_pilon)
TACAAGAGTTCTACCCATCTGACATTTCATTTCTTTCAGAAATACTATCC
ACCAGACTTCGATCCAACTAAACTTCCAAAATTGAAGAGAGGGAAGGATC
GACAGTTTGTTATCCGTATCATGGCTCCCTTTAGTATGAGGTAAAAGCTT
TCATGATATTTATTTTTATAGATCTTGCATGATACCATTATGAACCAGGA
TATTTCATAAAAAATGTTGAAAAATTTCTAGCCATAAAAGAAATTTGCTA
ATCTATGATTTTATGAGTCAACTTTTTACATGGGTAGTGACAATCCAAAA
CAAAAATTTATATTCTATTATTTCGTAGATGCACGACCTGCGGTGAATAT
ATTTACAAAGGAAGGAAATTCAATTCTCGAATGGTTAGTATTCTACCATG
TTACCTTTTTTGATTTTCTGTTGTTGATTAACTAAATTCCCAATTTTTAG
ATATTGCTTTGCATGGTAGGTTTACAGACACAAGGTCTATGCTTTACAGA
CATATATATGTGAAGAAATAAGAATTTCTGTCCAACTGTATATATTTTTT
TATTTTTTATTTTTTTATTTATTTTTATCTATAATATAGGTAACACGAAC
AAATAGTACAAAACTAAAGGTTCCTAACCTCCCGCAAAAGGACCACCAAA
TCATACCGCCAGGGGAAGGAACCCAAACTAAGCTAACAATAAATTAACAA
ACTATATTCACTCAGGAGATTGGGTGGCAGAGCAGCATATGCATTTTGTC
CTTATATTAGGACTCGTCAGCACTGCATACTGCACCCTGACTGGCCAGAT
CGATTTAGCTTTATATATAGCTGAATTTATTTTTCATATTCTTCGCATGA
GTTATTTATAGCAAATCATAACAAAGCATTTTTGACGTCTTTTCCAGGAA
ACGGTACAGAATGAGAACTACTTGGGTTTGCGTATTTATCGATTCTACAT
CCGGTGCACCAAATGCATTTCTGAGATCACTTTTAAGGTAAGTCGTACTA
GTTCTCAAAACCCTGAGCAAGGTTTTATTAAGATTAATGTTTTTGTGATT
GATATTTTCATTGTATAAAAAATTCGAATCATTTAACCTATTTTCCACGT
AGAAATTCTATCGTATTAAAACAATGATATATTTTTTTGGGACTTATGTA
TAAAGTGCTGTAAAATACAGGTTTGGGATTATAAGCAATGGAATTTCTAA
TTCTAATCACACCCAAAGAATGAAATTAATTACTTTCTGTTGCGATTGAC
TGTTGGTTAGAAGTCTAACGGGGAAATTTTCTACCTAACTTCCACGCTTT
TGTTATTTCTTCAGACTGATCCAAAAGAGTTCTGATTACGTGATGGAAAA
GGGTGCAACCAGGAACTTCGAATCGTTGAGGCGACTACAAGAGAAGATTG
AACGAGAAAGCAAAGAAGTTGAACAAGAAGAAGCTGCTAACCCTATGAAA
GTACGGTACTGTATTTTTTTTCTTAAAAGAATCCCCAGTCAACTACTAGT
CTAATGATCCCACTATTATAATTTTAAGCAGGAGGGGATCAGTACTATAA
TCTCTGACATCATGGCGCTTATCGACATAGTATCCAGACAAAGATTTGAG
AAAAGTTTACATTGATACCAATTAGCGATTTTCATCATTTTTTAAAAATA
GTTTACTACATGTTTTTTTTATAAGCATACAAAAATCTGAAGACAGGCTC
AGAGATGCTTAGGTCGAAAGCTTTATAAGGCTGAAAAATGCTTGAGGGGA
TGCTTATATCCTAATACTTAATACTGCTTATATGCTGCTATACTACTATA
ATACTGCTTATATCCATACTACAAAGTAGCTTATACCTTTTTCATAGGCT
CGAAGTAATGCTTAGCATATGCTTAATTTTTCCCCATATCTGAGCCTAGA
TATGCTTATAAGTGCAATGCTTATAAAAACAACAAGCATGTAATTAACCA
ATTTTACTTTCTGAAAGAAGGTAACACTGACATGACTTCAAATTACTCTG
GAGACCCGATTCTTCCAAAACTCCAGCTCTCTCGTATTTTTTTCGTTCCG
ATAGATGATATGATACGGTCTTGAATATCCTTTATTCTCATTGTCACAAA
AGTTCTTCATGTCAAACATCCCTTTTATCACCTGAGCATCAGTGGGGATT
CTTTCTATATTGATTTAGGTGTTTTGGCACAATGGTACAATCATTTTAAA
ATTTTTCAAATCGACCAACACTGTTTTAAGTGTCAATTAAATTTAGCTTC
TAAAATTAGAAAATCGATCAAGATTTGCTTGAATTTAATTAATTTTTTGC
ATTCTATATTTTTCCGATTTCACACTTCAGGCTCTGGAAACTCGAACTCG
TGACTCGAAACGTGAAATGGAGTCGATCGAAAAGTTGGAAGAATTGAGAG
ACTTGAACACGCGGGCTGCTGCAAGTAAGCGTGCTACTGCTCTGTTCTGA
TTAAATAAATTTGTGTCTGATTTTTAAGTGTATCCAGTACACTTTAAGCT
GTCTTTGAGTCAGTCTTTAAGTCAGTACCTTTGCATAATCCTTTAAGCTG
TCTTTAAGTCAGTCTAAGCAAAGAAACAGTTTATGAAATTTCAAACATAA
AAAAAATTAACAAAATTTAGGCTCATGAAAATTTATGTGCATTACCCCTC
TTTTTGTTTTACCTTTTTAGTCGATCCGGAGAAATTGATAGAAGATCACT
TGAGGGTTGGTCAAAGGTTGGTTGAAGATGAAATCAAACGACAGGAACAA
GAAGATGAAGATATGATCAAGTATGAACCAATTTTGTTGTGCAATAGGGA
TTGTGTTACCTTAAAGGAAGAAATTTTGGCGGGAATTTAATTTGGCGGAT
GGCCAAAAAAGTTTTTTCAGAGGGAATTTAATTTGGCGGATGGACGAAAA
AACTGAATTCGGCGGGAATTTAATTTGGCGGTCGCTTAAAAATTTAACCT
TAAGATGGCGTCAAAACAGCGAAAAAATAGTAAAAACACCTTAAAAGAGA
TCATATTTTCAAAATGTTTAATTTGGCGGGAATTTAATTTGGCGGATGGC
GGAAAAAAGAAATTTTGGCGGGAACTTAATTTGGCGGATTTCAGTCAAAT
CCGCCAAATCCGCCAAATTTTCTTTCCGCCAAAATTTCTCCCTTTAAGGT
ATTAAATAGTAACCTTAAAGTAGAATTGCTGCTGCTTTAATGATCAATTT
GAGTTTTTTGCTTTCTGTGAGATAAATCTCAGATACAAGATTCCAATAAT
TTATTCAGTTGGGTTGGAAATCGGGATTTTTTAGAGGAAAGAAAATGACT
GAAATGGAATGCAGTTAATCCCATTGAGTCAAAGAGACGGGGTTTCGCAG
CACAGAAAATGCTCAAAATGTGATTATGATTGTCATTAAGAATAAACTTC
TTAGTAATTAGTCTTTTCATCTAGCCATACAAAAAACCATCATTATTTTT
CTTTAGAAATATTTTCGGTAAGAGCGGTACAGGAGGTGACGGATACCTAC
GGCGTATAATCGATGACGGAAGCAGTGACGACGATGACGCTTCGACTTCT
CATCAAAGTTCGTCGTCGTCGGCTGGGGACAAAAGAAAAGCTACTGATTT
ACTATTGGACAGAGTAAGAAATGTGAAAACTATTCTTTAGAATGTTTGCT
AACGTCTTTTACTTTTTGCGAACTTTTGTATAATAATTTCTCCAATACAC
ATTATAAGAAGCTTTCCCGATAAATTTGTTGAAAATGTTCAACTTCAATA
TTCGTCTCACTTATTGAAAAAATTTTATCAAACCCATTTTTTTCAGACTC
GCTACTATCGAATCAGAGATAATCAAAGGATCCGATCCTTTCATATTATT
AGATATTATATATTATAACATCGCTGTCGTACTGTGTTAACCTTATCGAA
TATAACAGCAACAAATATGACTAAAGAAAAAAATGATAGTAGCCCTCCAA
TATTGTAGATTTCGGTCTAAGAAATCTCATGCAAAGGAAATAGAACACGA
TCATTTTTTCTAAAGTTTTTTTTTTCAACTTTCAGGATGATGTTGCTGGC
AGTTCAAGTTCATATACAACCTCTTCCTCATCGTTGTCAATGGGCCCTAC
ACCTGATCCCAGTAACAAAAAAGCTAAACTGAAAACACCCTTTGATGACC
TAGCATCTATGGTCAAAGTCAGTAAAAATAAAAATAAAGAAAAGTTGGCT
GAAGAACAAGCCAAAGCGGAAACGGAACGATTGGAAGCAGAAAAACGGAA
AAAGGAAGAAGAAGAAGAAATGGAACGGAAACAAAAAAATATTGTTAAAG
AACCAGAAGCGCTGCCCGCTTATAAAATCAATTTAAAGAAACAGACTGAT
AATAGTAATGCGAAGATGAAAGGAGCTTCGTTGAGCTTGTTGGGTGGATA
TGGTTCGATGAGTGGGAGCGATGATAGTGAGCAAGATTGA Coding sequence (CDS) from alignment at sc0000270_pilon:6322..10761- >XLOC_016264 ID=XLOC_016264|Name=XLOC_016264|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2354bp|location=Sequence derived from alignment at sc0000270_pilon:6322..10761- (Clytia hemisphaerica_ch_hm2_pilon)
TACAAGAGTTCTACCCATCTGACATTTCATTTCTTTCAGAAATACTATCC
ACCAGACTTCGATCCAACTAAACTTCCAAAATTGAAGAGAGGGAAGGATC
GACAGTTTGTTATCCGTATCATGGCTCCCTTTAGTATGAGTACAAGAGTT
CTACCCATCTGACATTTCATTTCTTTCAGAAATACTATCCACCAGACTTC
GATCCAACTAAACTTCCAAAATTGAAGAGAGGGAAGGATCGACAGTTTGT
TATCCGTATCATGGCTCCCTTTAGTATGAGATGCACGACCTGCGGTGAAT
ATATTTACAAAGGAAGGAAATTCAATTCTCGAATGATGCACGACCTGCGG
TGAATATATTTACAAAGGAAGGAAATTCAATTCTCGAATGGAAACGGTAC
AGAATGAGAACTACTTGGGTTTGCGTATTTATCGATTCTACATCCGGTGC
ACCAAATGCATTTCTGAGATCACTTTTAAGGAAACGGTACAGAATGAGAA
CTACTTGGGTTTGCGTATTTATCGATTCTACATCCGGTGCACCAAATGCA
TTTCTGAGATCACTTTTAAGACTGATCCAAAAGAGTTCTGATTACGTGAT
GGAAAAGGGTGCAACCAGGAACTTCGAATCGTTGAGGCGACTACAAGAGA
AGATTGAACGAGAAAGCAAAGAAGTTGAACAAGAAGAAGCTGCTAACCCT
ATGAAAACTGATCCAAAAGAGTTCTGATTACGTGATGGAAAAGGGTGCAA
CCAGGAACTTCGAATCGTTGAGGCGACTACAAGAGAAGATTGAACGAGAA
AGCAAAGAAGTTGAACAAGAAGAAGCTGCTAACCCTATGAAAGCTCTGGA
AACTCGAACTCGTGACTCGAAACGTGAAATGGAGTCGATCGAAAAGTTGG
AAGAATTGAGAGACTTGAACACGCGGGCTGCTGCAAGCTCTGGAAACTCG
AACTCGTGACTCGAAACGTGAAATGGAGTCGATCGAAAAGTTGGAAGAAT
TGAGAGACTTGAACACGCGGGCTGCTGCAATCGATCCGGAGAAATTGATA
GAAGATCACTTGAGGGTTGGTCAAAGGTTGGTTGAAGATGAAATCAAACG
ACAGGAACAAGAAGATGAAGATATGATCAATCGATCCGGAGAAATTGATA
GAAGATCACTTGAGGGTTGGTCAAAGGTTGGTTGAAGATGAAATCAAACG
ACAGGAACAAGAAGATGAAGATATGATCAAAAATATTTTCGGTAAGAGCG
GTACAGGAGGTGACGGATACCTACGGCGTATAATCGATGACGGAAGCAGT
GACGACGATGACGCTTCGACTTCTCATCAAAGTTCGTCGTCGTCGGCTGG
GGACAAAAGAAAAGCTACTGATTTACTATTGGACAGAAAATATTTTCGGT
AAGAGCGGTACAGGAGGTGACGGATACCTACGGCGTATAATCGATGACGG
AAGCAGTGACGACGATGACGCTTCGACTTCTCATCAAAGTTCGTCGTCGT
CGGCTGGGGACAAAAGAAAAGCTACTGATTTACTATTGGACAGAGATGAT
GTTGCTGGCAGTTCAAGTTCATATACAACCTCTTCCTCATCGTTGTCAAT
GGGCCCTACACCTGATCCCAGTAACAAAAAAGCTAAACTGAAAACACCCT
TTGATGACCTAGCATCTATGGTCAAAGTCAGTAAAAATAAAAATAAAGAA
AAGTTGGCTGAAGAACAAGCCAAAGCGGAAACGGAACGATTGGAAGCAGA
AAAACGGAAAAAGGAAGAAGAAGAAGAAATGGAACGGAAACAAAAAAATA
TTGTTAAAGAACCAGAAGCGCTGCCCGCTTATAAAATCAATTTAAAGAAA
CAGACTGATAATAGTAATGCGAAGATGAAAGGAGCTTCGTTGAGCTTGTT
GGGTGGATATGGTTCGATGAGTGGGAGCGATGATAGTGAGCAAGATTGAG
ATGATGTTGCTGGCAGTTCAAGTTCATATACAACCTCTTCCTCATCGTTG
TCAATGGGCCCTACACCTGATCCCAGTAACAAAAAAGCTAAACTGAAAAC
ACCCTTTGATGACCTAGCATCTATGGTCAAAGTCAGTAAAAATAAAAATA
AAGAAAAGTTGGCTGAAGAACAAGCCAAAGCGGAAACGGAACGATTGGAA
GCAGAAAAACGGAAAAAGGAAGAAGAAGAAGAAATGGAACGGAAACAAAA
AAATATTGTTAAAGAACCAGAAGCGCTGCCCGCTTATAAAATCAATTTAA
AGAAACAGACTGATAATAGTAATGCGAAGATGAAAGGAGCTTCGTTGAGC
TTGTTGGGTGGATATGGTTCGATGAGTGGGAGCGATGATAGTGAGCAAGA
TTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000270_pilon | genome | sc0000270_pilon:6322..10761 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 772-1176:406 |
| Aaloc | 616-771:984 |
| Aaloc | 517-612:1769 |
| Aaloc | 421-513:2111 |
| Aaloc | 295-420:3117 |
| Aaloc | 286-294:3127 |
| Aaloc | 196-285:3544 |
| Aaloc | 142-195:4112 |
| Aaloc | 1-138:4441 |
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