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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000045_pilon:1121877..1125773- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_016243 ID=XLOC_016243|Name=XLOC_016243|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3897bp|location=Sequence derived from alignment at sc0000045_pilon:1121877..1125773- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAATATCAACGTTTGAATTAAAAAAACAGTTAGCAGAAGAAGTCAA
AGAAGTATTTCAAAGTTTTGTTTAGGCCTCCGATTAAAGTCGTTATATAT
ATTTTTAGAACAATTCAGAGAAAGTGACCAAGGGACAAGCTTTAATCTTA
ATTGTTTAGCAAAAATTGTTTATTGACAATTAGAGAGTTATTAAGTTTCA
TGAGAGATTGAATTTCGTGATTAAGCAAGTGCAAAATCAATTATATCCAC
GAAACTTATTGATTAAAAACATCTTTAAACAAAAATACTTAATTTACGAA
TTCTATTTTTTTTATCAGGGAAAGTATTCATTGGGAAAGCCTATTGTTCC
ACAGACTTATGAAAAACTGGTAATGGATGACAAAGGAGAACCAACGATCA
CACAGTATACCACTGAGGGTAAAACCTAATCTAAACTCTCAGTATGAGAA
TGGACTCTTCCAGAAAATGTCCGCACATGGGGGGATGGAGTATATAGTGT
CCGGGCGGGTAGTGAAAAACCTACAAAATTTGCCTTGTCAGGGGTATATT
CATGCTGACCTAAAAGCCAAATATTAGTCGAATATGTAAGGTCAGGTAAA
ATTGATGAACTGAATTGTTCCCGCTTCTAGTTCTAATGAAATTGTCTTAT
AGTTATATTTATATAATAAAGGTTAATTAAAAAAAACACAAATTTTACAG
GAAGAATGTTTACACTACAAGAAGTCCGCCAGACAATGTTCAATAAACAG
GAAGATTTCCTCAGGATTAAATCCGATGAATATTACGAAACGATTGGCGA
GCAGGAGTTAAGTGATGAATTTGATCGGCTCCTCGAAAATTACGACCCAA
AATCACCGAACGAGGCAGTGCGTTTAAAGAAGTACCAGAGGGTCAGAACA
CTTGTATGTTGGCACGACTCGTCATCCGTCTCGAGCGCGTCTCACTTCCT
CGTAACATTCAACACGCTGTACGACCCAGCCATTTTCTTGACGGATGAGG
AATATTTCCAAAGGACAGGTAATAACATGTGATACTAGACTTTTTGTGGA
TGCAATCAAACAAACAAAACATTAACACTGTACGATAAACATGCGTTATA
AAATTGTCGTAAGGTCTCGTTTGTGAAATTATTATTTCATAATCATAGGA
TTAAAGGTCGATGTCCAAGAAACAGTGGAGCGACCAGAGACGTACATGTT
GGCGCGATGCACGGCAGATAAGAACCAATTACTGTACAGCGAGATTCGAT
TGGATGACATTAAAAAATGTGAGGCATCCCCAATCCAGATAAACAAAGTT
CCAATACATGACCAAGTGCGATTTTTCAAAGGTAAACGACGATTTCATCC
TAAAAAAGAAATAAAAAAATTATAGAAAGCTGTTTTTATGATAATACAAG
TTACAGCAAACAGAAAGGCTCTCAAGATTTAAATTAATTATTATCTTATA
GGAGACGGCCCTGCTTGTCAGCTTGAGTCCGGACACCAGAAAGGAGGAAG
GTATTTTTGTTGGGCGTGCGAAGTGGATGGGGAAAGAACATACGACCTTG
CACATTCACTCAATACTAAACATGTCTCTCTCAATTCGAGAATCACTGAT
ATGTTACAAACAACAGCAGGTCGAATAGGTGCTGAGAATGGCAGAACAAA
CTTTTACGCTGATCTTGATAGAGAAGGCATGATTTCAGAGCTCCATCAAA
GAAAGGTAGGTCAAAAGCTAGAGGGAATGATACATTTGGAGCAGAAAAAT
ACGATAAAGCCATTCCTAGAAGAGTCCTCGGAAATTTAAGACCCTTGTAA
ATTTGGAAAGTTACAAAGACCAATAAGAAAATACTTCTAAATAGCATATA
GAAAGTATTATTTGAATTGTTCCTAAAAAGAAAAAGATGTGTGGAAAATA
CAAACCATTTTAATATTTCAGAACAAAGACCAACTCACGAACAAAACCAA
AAAACAAATTGACAAGATTTTCGCCGAAACGGTCAAAGGCAAACAATGTT
TCCCAGCTTTGCTTCACGGAAATCTTAAAGAATGTAAAACTGCTGTTCCA
AGATATGAAGTGCTACCTCTTGAAGGTCTACATACGATGGCTGGCCATAT
TAAAAACATTTATAATGAAATACAATACCACCTTAAGGATGAGGCAAAAC
TTAGGTTTCAACGGGTAATGAAAGCTACATTCTCTTCAAAAGAGGCAAAA
AGAGGCTGTGATTACAGATTATCACTTTTAGAGATGACAATCTTCATGTT
GACAAAAAACTTTCTACCCAGTTATCATCTTCTTTTCACAACTCTGGTTG
AGATACAAGGTATTGTCTACTCAAATGAAGAACACCGTACATCAAAAGCA
ATATTAAGGTTGCACATCCTCACGTTTGTCCATGCATTGGAGTTTAAACG
TCTGTTCCTGAAAACGAAGAAATTAACAGTAAGGAAGATGTTTGGCCAAT
ATCATCATGCTCTAATCATACATGCACCGCAGCAACTAAGGATTGTGTCT
CTCTCGTCAACAAATGTTGAAAATGAAGAGCGACAATTCAATTTCATGAA
AACTGCAAGTTCCCTAACATCGAACCACCATCCTGAGAATGTTCTTGTCA
ACTGTATAATCCGATTACAAGTAAGGGAAGTTTCTGATATTTAAGCTTTA
TGCCTCTCTATTAAAGATATAAACGACCATTGGGATACCCTGAAATAATA
TGAAAGTACTTTATCTTAAATAAAACGAAAGATGACAGATTGGACTTATT
TTCTCTTTAGGCAACAACAGAATTCAGATCAGAGTTTCAAGAATTGATGA
CGGTTCCACAAGTAGAATCAAAGATCTCAAAGTTGGCAAGCTATTTTGAA
AGTGAGGATACCATTATTCCTTACCAAACGATCAAAAATTATCCACGAGA
GTACCAAGCTTGCCTGGAAAGAATTGGAGACTACCTATTGGAGTCAAAAG
TGTGGAAGGAGGTGGAAACTGGTGTCAAGTTTTATGATGTTTCTGGAGAC
TGGATGAAGCAGAGACATCATTTTCGAAACTTCACGCTTGAAGAAGAACT
GGCATACGTTTCCAAATGCTGGACCAAGTGCCTAACCAGTCCGAAGTTGA
TACCAGCCAATACTATTATTGATAGTGAGGGGAAACGAACAACCATTGGC
ACGCTTCAGAAGTTTTCCACAAATAACAATCGCCCTATTCCTTTAATCCA
GAAAGTCAAGTAAGGGCGAATTGTTTCCTAGCTCTAAGTCAGGCAATATT
GGATGTTACTGATTGAAGTATTTTTTTAAGTCAATCTATTACTGCGAGAA
ATCATACATAAATCATAGAATGGATATATCACAATAATTATTTCTAGTTG
ACAGATTTTACACAGCTCAACTATTTGAATTTAAAGACATTGTGGTATAA
TTGATTTATTCTACTGTAATTATTTTAGCTCAATTCAAGATGTCACACCA
ATAAATCTCACAGTGGAAGACCAAAACGAATCAATTGATGCTTTGGAACT
GAGGTATAATATTTCTTTTATGTTGTTTTCAGAAGCCATGTTTATCGCTT
CGTAGTACACTCTGTTAACATTGTCTGTTTTATAGAAATCTCAGTTTGAT
TTAAATCATGATTAAGGTAACAATAACAATAAAAAAACAAAATAATTTTA
GCCTGAATGACACACCAAAGGCAGACAGTCAAAATGAATCATTCCTGAAT
TTGGCATCCAGGTAATAATTCTTTAAAATTCTTTTTTCCTTTCCCAACAA
ACTTTTCGAAATGACAAAATGTTTTTTATATAACGTATTGAAACTTTTTT
CAAACACCAGCAAGTCAAACAGGATAAAAATTTTTTTAAACAAAATCTAT
TTAGCTCAACACAAGAGGATATCTATATGGATGGCAAATTGAATGGG Coding sequence (CDS) from alignment at sc0000045_pilon:1121877..1125773- >XLOC_016243 ID=XLOC_016243|Name=XLOC_016243|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4470bp|location=Sequence derived from alignment at sc0000045_pilon:1121877..1125773- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAATATCAACGTTTGAATTAAAAAAACAGTTAGCAGAAGAAGTCAA
AGAAATGGAAATATCAACGTTTGAATTAAAAAAACAGTTAGCAGAAGAAG
TCAAAGAAGGAAAGTATTCATTGGGAAAGCCTATTGTTCCACAGACTTAT
GAAAAACTGGTAATGGATGACAAAGGAGAACCAACGATCACACAGTATAC
CACTGAGGGGAAAGTATTCATTGGGAAAGCCTATTGTTCCACAGACTTAT
GAAAAACTGGTAATGGATGACAAAGGAGAACCAACGATCACACAGTATAC
CACTGAGGGAAGAATGTTTACACTACAAGAAGTCCGCCAGACAATGTTCA
ATAAACAGGAAGATTTCCTCAGGATTAAATCCGATGAATATTACGAAACG
ATTGGCGAGCAGGAGTTAAGTGATGAATTTGATCGGCTCCTCGAAAATTA
CGACCCAAAATCACCGAACGAGGCAGTGCGTTTAAAGAAGTACCAGAGGG
TCAGAACACTTGTATGTTGGCACGACTCGTCATCCGTCTCGAGCGCGTCT
CACTTCCTCGTAACATTCAACACGCTGTACGACCCAGCCATTTTCTTGAC
GGATGAGGAATATTTCCAAAGGACAGGAAGAATGTTTACACTACAAGAAG
TCCGCCAGACAATGTTCAATAAACAGGAAGATTTCCTCAGGATTAAATCC
GATGAATATTACGAAACGATTGGCGAGCAGGAGTTAAGTGATGAATTTGA
TCGGCTCCTCGAAAATTACGACCCAAAATCACCGAACGAGGCAGTGCGTT
TAAAGAAGTACCAGAGGGTCAGAACACTTGTATGTTGGCACGACTCGTCA
TCCGTCTCGAGCGCGTCTCACTTCCTCGTAACATTCAACACGCTGTACGA
CCCAGCCATTTTCTTGACGGATGAGGAATATTTCCAAAGGACAGGATTAA
AGGTCGATGTCCAAGAAACAGTGGAGCGACCAGAGACGTACATGTTGGCG
CGATGCACGGCAGATAAGAACCAATTACTGTACAGCGAGATTCGATTGGA
TGACATTAAAAAATGTGAGGCATCCCCAATCCAGATAAACAAAGTTCCAA
TACATGACCAAGTGCGATTTTTCAAAGGATTAAAGGTCGATGTCCAAGAA
ACAGTGGAGCGACCAGAGACGTACATGTTGGCGCGATGCACGGCAGATAA
GAACCAATTACTGTACAGCGAGATTCGATTGGATGACATTAAAAAATGTG
AGGCATCCCCAATCCAGATAAACAAAGTTCCAATACATGACCAAGTGCGA
TTTTTCAAAGGAGACGGCCCTGCTTGTCAGCTTGAGTCCGGACACCAGAA
AGGAGGAAGGTATTTTTGTTGGGCGTGCGAAGTGGATGGGGAAAGAACAT
ACGACCTTGCACATTCACTCAATACTAAACATGTCTCTCTCAATTCGAGA
ATCACTGATATGTTACAAACAACAGCAGGTCGAATAGGTGCTGAGAATGG
CAGAACAAACTTTTACGCTGATCTTGATAGAGAAGGCATGATTTCAGAGC
TCCATCAAAGAAAGGAGACGGCCCTGCTTGTCAGCTTGAGTCCGGACACC
AGAAAGGAGGAAGGTATTTTTGTTGGGCGTGCGAAGTGGATGGGGAAAGA
ACATACGACCTTGCACATTCACTCAATACTAAACATGTCTCTCTCAATTC
GAGAATCACTGATATGTTACAAACAACAGCAGGTCGAATAGGTGCTGAGA
ATGGCAGAACAAACTTTTACGCTGATCTTGATAGAGAAGGCATGATTTCA
GAGCTCCATCAAAGAAAGAACAAAGACCAACTCACGAACAAAACCAAAAA
ACAAATTGACAAGATTTTCGCCGAAACGGTCAAAGGCAAACAATGTTTCC
CAGCTTTGCTTCACGGAAATCTTAAAGAATGTAAAACTGCTGTTCCAAGA
TATGAAGTGCTACCTCTTGAAGGTCTACATACGATGGCTGGCCATATTAA
AAACATTTATAATGAAATACAATACCACCTTAAGGATGAGGCAAAACTTA
GGTTTCAACGGGTAATGAAAGCTACATTCTCTTCAAAAGAGGCAAAAAGA
GGCTGTGATTACAGATTATCACTTTTAGAGATGACAATCTTCATGTTGAC
AAAAAACTTTCTACCCAGTTATCATCTTCTTTTCACAACTCTGGTTGAGA
TACAAGGTATTGTCTACTCAAATGAAGAACACCGTACATCAAAAGCAATA
TTAAGGTTGCACATCCTCACGTTTGTCCATGCATTGGAGTTTAAACGTCT
GTTCCTGAAAACGAAGAAATTAACAGTAAGGAAGATGTTTGGCCAATATC
ATCATGCTCTAATCATACATGCACCGCAGCAACTAAGGATTGTGTCTCTC
TCGTCAACAAATGTTGAAAATGAAGAGCGACAATTCAATTTCATGAAAAC
TGCAAGTTCCCTAACATCGAACCACCATCCTGAGAATGTTCTTGTCAACT
GTATAATCCGATTACAAAACAAAGACCAACTCACGAACAAAACCAAAAAA
CAAATTGACAAGATTTTCGCCGAAACGGTCAAAGGCAAACAATGTTTCCC
AGCTTTGCTTCACGGAAATCTTAAAGAATGTAAAACTGCTGTTCCAAGAT
ATGAAGTGCTACCTCTTGAAGGTCTACATACGATGGCTGGCCATATTAAA
AACATTTATAATGAAATACAATACCACCTTAAGGATGAGGCAAAACTTAG
GTTTCAACGGGTAATGAAAGCTACATTCTCTTCAAAAGAGGCAAAAAGAG
GCTGTGATTACAGATTATCACTTTTAGAGATGACAATCTTCATGTTGACA
AAAAACTTTCTACCCAGTTATCATCTTCTTTTCACAACTCTGGTTGAGAT
ACAAGGTATTGTCTACTCAAATGAAGAACACCGTACATCAAAAGCAATAT
TAAGGTTGCACATCCTCACGTTTGTCCATGCATTGGAGTTTAAACGTCTG
TTCCTGAAAACGAAGAAATTAACAGTAAGGAAGATGTTTGGCCAATATCA
TCATGCTCTAATCATACATGCACCGCAGCAACTAAGGATTGTGTCTCTCT
CGTCAACAAATGTTGAAAATGAAGAGCGACAATTCAATTTCATGAAAACT
GCAAGTTCCCTAACATCGAACCACCATCCTGAGAATGTTCTTGTCAACTG
TATAATCCGATTACAAGCAACAACAGAATTCAGATCAGAGTTTCAAGAAT
TGATGACGGTTCCACAAGTAGAATCAAAGATCTCAAAGTTGGCAAGCTAT
TTTGAAAGTGAGGATACCATTATTCCTTACCAAACGATCAAAAATTATCC
ACGAGAGTACCAAGCTTGCCTGGAAAGAATTGGAGACTACCTATTGGAGT
CAAAAGTGTGGAAGGAGGTGGAAACTGGTGTCAAGTTTTATGATGTTTCT
GGAGACTGGATGAAGCAGAGACATCATTTTCGAAACTTCACGCTTGAAGA
AGAACTGGCATACGTTTCCAAATGCTGGACCAAGTGCCTAACCAGTCCGA
AGTTGATACCAGCCAATACTATTATTGATAGTGAGGGGAAACGAACAACC
ATTGGCACGCTTCAGAAGTTTTCCACAAATAACAATCGCCCTATTCCTTT
AATCCAGAAAGTCAAGCAACAACAGAATTCAGATCAGAGTTTCAAGAATT
GATGACGGTTCCACAAGTAGAATCAAAGATCTCAAAGTTGGCAAGCTATT
TTGAAAGTGAGGATACCATTATTCCTTACCAAACGATCAAAAATTATCCA
CGAGAGTACCAAGCTTGCCTGGAAAGAATTGGAGACTACCTATTGGAGTC
AAAAGTGTGGAAGGAGGTGGAAACTGGTGTCAAGTTTTATGATGTTTCTG
GAGACTGGATGAAGCAGAGACATCATTTTCGAAACTTCACGCTTGAAGAA
GAACTGGCATACGTTTCCAAATGCTGGACCAAGTGCCTAACCAGTCCGAA
GTTGATACCAGCCAATACTATTATTGATAGTGAGGGGAAACGAACAACCA
TTGGCACGCTTCAGAAGTTTTCCACAAATAACAATCGCCCTATTCCTTTA
ATCCAGAAAGTCAACTCAATTCAAGATGTCACACCAATAAATCTCACAGT
GGAAGACCAAAACGAATCAATTGATGCTTTGGAACTGAGCTCAATTCAAG
ATGTCACACCAATAAATCTCACAGTGGAAGACCAAAACGAATCAATTGAT
GCTTTGGAACTGAGCCTGAATGACACACCAAAGGCAGACAGTCAAAATGA
ATCATTCCTGAATTTGGCATCCAGCCTGAATGACACACCAAAGGCAGACA
GTCAAAATGAATCATTCCTGAATTTGGCATCCAGCTCAACACAAGAGGAT
ATCTATATGGATGGCAAATTGAATGGGCTCAACACAAGAGGATATCTATA
TGGATGGCAAATTGAATGGG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000045_pilon | genome | sc0000045_pilon:1121877..1125773 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 2194-2235:43 |
| Aaloc | 2134-2190:246 |
| Aaloc | 2059-2130:469 |
| Aaloc | 1609-2055:1138 |
| Aaloc | 910-1608:1977 |
| Aaloc | 658-909:2445 |
| Aaloc | 475-654:2748 |
| Aaloc | 157-471:3196 |
| Aaloc | 55-153:3580 |
| Aaloc | 1-54:3898 |
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