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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000272_pilon:7846..11553+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_016225 ID=XLOC_016225|Name=XLOC_016225|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3708bp|location=Sequence derived from alignment at sc0000272_pilon:7846..11553+ (Clytia hemisphaerica_ch_hm2_pilon)
gaatGCATTGGAAAGTTAAATGTTATGTAAGTGCAATTATTATATAggta
aatataatatataataagcTAAATAGATTCAGCTCCATGAAACCCAGCTT
ATCaaaaaggatgcagttaaaaattaaacatgaaatgtgacaaaaacaaa
aatttaatacaTTTTGGTCGTAGCTTTTGTTCTGTGTTGATATGTAGAAT
TGTTTTATTTAGGCAGTGAGACAATTGTTTTGTCCATTATTCATTTCAGT
CTTCGTTCATGTactaacaacaacaacaatgaaaaagttatgtTTGGATT
AAGAATCAAGGATTCAAAATCAATATTATGGAAAACAACAACCAGAGTTC
TATGCTTGAAGGTAAATATTTCAATAAGAGAAtgtgtttttgtattttaa
gtatttttgtaatttgttattttgGTAAGAGTTAAACTAGAATTAGAAAT
GGCCAGCTTTGTCCGCCAAGAAAATTCATTAATTAAACTACATATATTGT
Catgataccttaagggaataaatttcgcggggacaaatccgcgaaattaa
attctgcgaaacaAGAATATTcccatgatttaaaaaatcacctatAGAAT
TGGTGTTTTGGGGGCAAAATAAGCcataatttaaacaaaaatttctctca
accgcgaaattaaattccgcgaaacttctgcgaaatttctttccttaagg
tAACTTTTAGTGACTTGTTCTTGTCATGGTTCACATTGAGTTATTTTACT
CATCATACTACTCATCATTattgttttataaaatttagcaaaaatcaatg
ttttggaaggccccccccagcggtttgcgtgaatgggcattttcggttgc
gtgaatgcgtgaaaattggggaaaaaatgcgtgtatgcgtgaattgaaaa
aacttgcgtgaacgtgaaaattcactttttgattgcgtgaatgcgtgaat
ctgggctattttatgtgcgtgaatacgtgaattttcccttttttccaccg
atcatgtgcagttttcccgattttccaatgtttcctgGAATTTtaccgaa
aattttccgatttcctgaaaaatcgggttattgcgtgaaactcgaggaaa
atttgcgtgaatgcgtgaatttcgaaaaaaaattgcctgattgcgtgaat
taagggtccgctggggggggggggccttgGAAGGATTTTCCCGCATATAA
TCATGTAAGAATTTTACtatcgcgaccagtgagtaccagaaacatcttgg
tctaatcttagattcaaaactttcttttgatcgccatctagacgagaaga
taaaaaaggccaataaaggaattggtcttattaatcgacttcgcaagcat
gtgcctaggagatctctactaaccatttataaatctttcattaggcctca
tcttgattatggtgatatcgtatatgaccgcccaggaaatgctacctttg
tgcagaagcttgaatctattcaatataatgcctgtttagctataacaggc
tgttttcgtggaacgtctcaagaaaaactatattcagaacttggtcttga
aactcttgctgacaggcgctttgctagaagaatgatattcttctatggaa
ttattaataatttagccccttcgtatttacgtaactacctgccagtaaga
cttacagcaccaggtggccttagaacaagaaatcctatttatcctcttaa
tatacgaactgagcgtttccgtaacactttcTTTCCGTagtgcatatctc
agtggaatgttctgggaggtaatatacgagatctaccttcaattaaaact
ttcaaaaaagcaatctatgaatttttgagacccaagcaatctcatgtttt
tgatgctcctgacattcaaggagtgatctttcttaatcgacttcgggtcg
gtttcagccatctcaacgagcataaatttagacatggcttccacgacact
ttagaccctttctgtggttgccgaactaactctgttgaaaacactcagca
ctttcttctgcactgctctatatattcccatgcaagacaatctttgttcg
acaaacttcagaccctaggcattatttttcatccgccgcttaaccctcct
tttttctgtcggcttttattatatggggatgaaagtttgagttcaaatct
aaataaatctattctttgttctgttgttgaatttcttaacgaaactggaa
ggtttagcggtgctttattttaggcttttacctaacaattgtagcttcct
tctccaagatttttttttttttctttatttacttatttatttatttttta
catagtctagtacctctggcgatataacgttagttcctagcggggggagg
gactatattttatgtttaagtaatgttttgtaatatatgttcgtagtgta
cacgtgtttttgtttcaataaagaaaaaaaaaaaaaaatttactttgatg
ACTTTTATAAAATGATCTTCCTTTACTGTTAGGTAAATCTTCTTCAGAAA
ACTGTCAAGTTGGTTCGAACACTGACAATATCTGGCTTTTGGAGATTGAG
AGCAGAAATTTTGGAGGAGGTGCGCTATAAGAATCTTCTAGAGAGTAGTT
TAATGGAAGATTTCCAATTGATTGATCATGATGGTGAAGTTgtgaaagat
gaaaatgaagaagaagttATGACGAATACAGATTTGGTAAAATTCATTta
aacatatttttgaaaacttatatTTATGATATAAACAAATTGTGATATAA
TTAAATAAAGTTAATGCCTGCGTCCATTCATATACTTTAGTTTGACCAGT
TTGACCTTCAGCTCATTTATAATAATCAAGGTTAtaagttttaagttttc
aaTTCCGTTTTTCCTCAACAAGAGCTATTATAAAAACTTTGGTATAACCT
AAACTTCTTATATTGATAAGGACTTCATTAAAATATGTCAGAACATATGT
ATTCCATAAATTTCCTTTTATTGTCTTTTTAGCCAGTTCCTTGCTCGTTG
ACAACATCTGgaatatttaaaaagtaagtattTGGCAAAAGATTATTGAC
GTATACACATAAAATGATAAcataacatttaaaaaatttcatcacaGTTT
TCTGAACACAGATGAACCAGCAAAGAGATTGTACAGAAACATGACAGAGC
TTTTGTGTTTTTAGTACAGTAAGCAAGTGTTTTATTGTAACCATGATTAT
CTCTGAATTTCTGATATCATGCTTTCAGAATTTCATTGTATGCATTTTGC
TTTCCACTCCAGGGTTGAGATGGTGACATTGGATGATAACACCGAATGCT
TGATTTGTATGGataacaaaattgaagtttcaTTACCTTGTGCTCATAGT
TTTTGTACAGCTTGTATAAGCACGTGGTGAGTTCTTCTCTTTAATTATTA
CCATTATGAAATCATAAATTGTGTCTTACTTATTTATTATGGTGAATTTC
TCacttttcatttaattttccaTAATCagttctcaccaaaattaaaagtt
ttgtttctcgctaaaacgtcatcaaaaaattaatttcttcacCTTAATTT
CCAAATCCATTTTATTTCCTTCCAGGCACGACACCAATAAAAGTTGTCCA
GTATGTCGAGATCATTTGGACAAGACTGAAGATTGCTGGGAATTCACTGA
TTTGCCAGATTTAGAAGAAATCAACGAAAAAGTAGTCGAACTGGCTACCG
GAGATTGA Coding sequence (CDS) from alignment at sc0000272_pilon:7846..11553+ >XLOC_016225 ID=XLOC_016225|Name=XLOC_016225|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1260bp|location=Sequence derived from alignment at sc0000272_pilon:7846..11553+ (Clytia hemisphaerica_ch_hm2_pilon)
gaatGCATTGGAAAGTTAAATGTTATgaatGCATTGGAAAGTTAAATGTT
ATTCTTCGTTCATGTactaacaacaacaacaatgaaaaagttatgtTTGG
ATTAAGAATCAAGGATTCAAAATCAATATTATGGAAAACAACAACCAGAG
TTCTATGCTTGAAGTCTTCGTTCATGTactaacaacaacaacaatgaaaa
agttatgtTTGGATTAAGAATCAAGGATTCAAAATCAATATTATGGAAAA
CAACAACCAGAGTTCTATGCTTGAAGGTAAATCTTCTTCAGAAAACTGTC
AAGTTGGTTCGAACACTGACAATATCTGGCTTTTGGAGATTGAGAGCAGA
AATTTTGGAGGAGGTGCGCTATAAGAATCTTCTAGAGAGTAGTTTAATGG
AAGATTTCCAATTGATTGATCATGATGGTGAAGTTgtgaaagatgaaaat
gaagaagaagttATGACGAATACAGATTTGGTAAATCTTCTTCAGAAAAC
TGTCAAGTTGGTTCGAACACTGACAATATCTGGCTTTTGGAGATTGAGAG
CAGAAATTTTGGAGGAGGTGCGCTATAAGAATCTTCTAGAGAGTAGTTTA
ATGGAAGATTTCCAATTGATTGATCATGATGGTGAAGTTgtgaaagatga
aaatgaagaagaagttATGACGAATACAGATTTGCCAGTTCCTTGCTCGT
TGACAACATCTGgaatatttaaaaaCCAGTTCCTTGCTCGTTGACAACAT
CTGgaatatttaaaaaGGTTGAGATGGTGACATTGGATGATAACACCGAA
TGCTTGATTTGTATGGataacaaaattgaagtttcaTTACCTTGTGCTCA
TAGTTTTTGTACAGCTTGTATAAGCACGTGGGTTGAGATGGTGACATTGG
ATGATAACACCGAATGCTTGATTTGTATGGataacaaaattgaagtttca
TTACCTTGTGCTCATAGTTTTTGTACAGCTTGTATAAGCACGTGGCACGA
CACCAATAAAAGTTGTCCAGTATGTCGAGATCATTTGGACAAGACTGAAG
ATTGCTGGGAATTCACTGATTTGCCAGATTTAGAAGAAATCAACGAAAAA
GTAGTCGAACTGGCTACCGGAGATTGAGCACGACACCAATAAAAGTTGTC
CAGTATGTCGAGATCATTTGGACAAGACTGAAGATTGCTGGGAATTCACT
GATTTGCCAGATTTAGAAGAAATCAACGAAAAAGTAGTCGAACTGGCTAC
CGGAGATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000272_pilon | genome | sc0000272_pilon:7846..11553 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 673-804:3577 |
| Aaloc | 559-669:3264 |
| Aaloc | 517-555:2983 |
| Aaloc | 313-516:2483 |
| Aaloc | 202-312:251 |
| Aaloc | 175-198:1 |
|
