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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000485_pilon:94601..97508- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_016173 ID=XLOC_016173|Name=XLOC_016173|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2908bp|location=Sequence derived from alignment at sc0000485_pilon:94601..97508- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCTCAGATGCATCAACAGAGCAACAGAACAACACACCCTCAGAGGTA
AGCAATTTTCTAAAACTTTGCTCTCATAAAGTAGAAAAATTTCAAGGTGG
TAGACTTTCTAATTACTCTAGCCAGTGGAAAACACTAACTAGTGATAAAA
ATATTTTGGATATGGTTACTTATGGGGACACTATAGAATTTGAGAATGAG
GTTCAAAGTAAACACTTTTGTCTAAACCAATATGATAATGAAGATGAGAG
CTTAGTCCTCTCTGAAGTGCAAAAAATGCAAAAAAGGGGAATTATCAAGG
AAACTTCTCATGAAGAGATAGAATATGTATCTCCCATATTCTGTACCCCA
AAAACTGATGGTGGGATAAGATTGATATTGAATTTGAAAAAATTAAACCA
ACATATAAAATTTCGTCACTTCAAAATGCAAACCATCAGGGATGCTTTAC
TAATGATAAATGAAAATGATTTTCTGACATCCATAGATCTTAAAGATGCA
TACTATAGTGTTCCTATTCATAAAGATTTCCAAAGTTATCTCAAATTTCA
ATTTAGAGGAAAATTGTTTAAATACACCTGTTATCCTAATGGCTTAGGTC
CTTGTCCTAGAAAATTTACCAAACTAACTACTGTCCCCATGAGTGAGATA
AGAAAACAGGGTCACTCTATATGTGGTTATATAGATGATTTCTTAATGGC
TGAAGATTCATATCAGAGAGCCTTGAGAGGAACATTAGTGGCTGCAAAAC
TTTTTGACTTTGCTGGGTTTGTAGTCCACCCAATTAAATCTCAGTTATTA
CCATCACAAAGAATTGTTTTTTTGGGATTCCTTATTGACACAGTGACAAT
GACTTTAAAGCTCACAGAAAAGCGCTCAAAAACTTTGAAAGACCACATTA
ACAAACTCTTGACAATCAAAAAACCAACAATCAGATATGTTGCTAAGGTC
ATTGGTCATATTATTTCGGCACTTCCGGCTTCAAAATTTGGTGCATTACA
TTACAGAAAACTTGAAAAGGACAAAACTAATGCATTGTTTGAAAATGACC
ACAATTTCGACGCCCAAATGGGCCTTAGTGAGGAAGGAAAAAGAGACCTG
ATCTGGTGGAGAAACTCACTTCCTTCACTAAAAAATTGGATAAGACCTCC
CAAAATAGATGAAACCATCTCAACTGATGCATCAAAATTTGCTTGGGGTG
GAATTTTTGACCAAAATATAGGAGGCTCATGGTCACAATCTGAGATTGAA
TACCACATTAATGTAAAAGAGATGTTAGCAATACTTTTCACTTTAAAAAG
TTTTGGGGAAAAATTTGAAAGTAAACATATTACTATATTGTCAGATAATA
CAACTGCAATTGGGGTGATAAACAAAATGGGCAGCAGCAAGAGTGTCTTA
TGTGACAATACATGTCATCAGATTTGGGAGTTTGCACAAAAACACAACAT
GTGGATAACATGTTCTTACATCCCAGGAAAAGACAACATTGATGCTGACC
ATGAATCAAGAAAAAATTATAAAGGGAGTAACTGGATGTTAAACAGAAAG
ATATTTTACAATGTTTGTCAAGAACTGAATTACTACCCGGATATAGATTG
CTTTGCAAATAGACTAAACCACCAGACTCCCACTTATATATCATACAAGC
CAGACCCAGGAGCAAAATTTGTTGACAGCTTCACATTAAACTGGTCTCAT
TTAAATTACCCATATGCCTTTCCCCCTTTCAGCTTGGTGGGAAGAGTCCT
ACAAAAAGTCAAAACAGATCGAGTCGAGAGATGCATGATAGTCGTCCCAA
ACTGGCCCAGCCAGCCTTGGTACACAAAATTAACAAAGATGATGGTCTCA
GAACCAAAAATCATAAAACCAGGTCAGAAAGTCTTAGTTTTACCGGAGGA
CCCGACTGCAATTCACAACATCTGGAAAAGAGTGGAAATTATGATCTGCC
TTGTGTCAGGGAGGAATATTTAAAACAAGGGTTTTCTGAGGATGCTATTG
ATATTTTAATGAAAAGTTGGCGCTCGGGAACTGTAAAACAGTACCAACCA
GTAATAAAAAATTGGATTAAGTTTTGTGGGAATGACATAGATCCTTTTCA
ACCACCCATAACAAAGTGTCTTGATTTCCTCTCATCTCTTTTCAAGAATG
GGTCAAGTTATAGCCAGATAGCAAATGCAAGAAGTGCTTTATCGTCAATT
GTATCACCAATGCATGAAATAACCTTTGGTAGATTACCAGTTGTAAAAAG
GTTTATGAAAGGCATTTTTGAAAGTAGACCTGTATTACCTAGAAATAACA
TTATCTGGGATGTAAATATTTTATTTGATTATCTTAGAACTCTACCAGAT
TTAGAAGCTCTGTCCTTAAAACAGCTAACTCAGAAATTAGCAATTTTACT
GGCAATTGCCTCAGGCGGCCAAAGACTTCAAACTGTCCATGCTATTCTTT
TAAAAGATATCATTTTTCAAGAAAATAAGATTATAATACCTATTACATCT
GTTCTAAAACAAACGAGACCCTCAAAACACATTGAGCCTCTGACTATCAG
AAAATTTGGGGACAAAGAGCTATGTATACACTCTATTTTTATTTACTATA
TTGAATTTACAAAACCATTAAGAAAGGGAGAACAATTATTTATAAGTTAT
AGAAAGCCACACAAATGTGTCACAAAAGATACTGTGGCAAGGTGGTGTAA
ACATATATTAAGAAACTCTGGCATCGATACCTCTATTTTTTCAGCACACT
CGACCAGATCCGCAACGACATCTAAAGCGAAGTTACGTAAAGTCCCAATG
GAACACATCGTCAGAAATGCTGGATGGGCAAACGCTCGTACTTTTGCAAA
TCATTATGACAAAACTGTCATTGAAGACATCAATCTCTTAGAAGCTTTAA
CAAATTGA Coding sequence (CDS) from alignment at sc0000485_pilon:94601..97508- >XLOC_016173 ID=XLOC_016173|Name=XLOC_016173|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=702bp|location=Sequence derived from alignment at sc0000485_pilon:94601..97508- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCTCAGATGCATCAACAGAGCAACAGAACAACACACCCTCAGAGATG
CCTCAGATGCATCAACAGAGCAACAGAACAACACACCCTCAGAGCTTGGT
GGGAAGAGTCCTACAAAAAGTCAAAACAGATCGAGTCGAGAGATGCATGA
TAGTCGTCCCAAACTGGCCCAGCCAGCCTTGGTACACAAAATTAACAAAG
ATGATGGTCTCAGAACCAAAAATCATAAAACCAGCTTGGTGGGAAGAGTC
CTACAAAAAGTCAAAACAGATCGAGTCGAGAGATGCATGATAGTCGTCCC
AAACTGGCCCAGCCAGCCTTGGTACACAAAATTAACAAAGATGATGGTCT
CAGAACCAAAAATCATAAAACCAGCACACTCGACCAGATCCGCAACGACA
TCTAAAGCGAAGTTACGTAAAGTCCCAATGGAACACATCGTCAGAAATGC
TGGATGGGCAAACGCTCGTACTTTTGCAAATCATTATGACAAAACTGTCA
TTGAAGACATCAATCTCTTAGAAGCTTTAACAAATTGACACACTCGACCA
GATCCGCAACGACATCTAAAGCGAAGTTACGTAAAGTCCCAATGGAACAC
ATCGTCAGAAATGCTGGATGGGCAAACGCTCGTACTTTTGCAAATCATTA
TGACAAAACTGTCATTGAAGACATCAATCTCTTAGAAGCTTTAACAAATT
GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000485_pilon | genome | sc0000485_pilon:94601..97508 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 190-351:163 |
| Aaloc | 49-186:1176 |
| Aaloc | 1-45:2909 |
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