|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000124_pilon:935747..940891- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_016085 ID=XLOC_016085|Name=XLOC_016085|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5145bp|location=Sequence derived from alignment at sc0000124_pilon:935747..940891- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTGTGTTCACATTCTCAGCTTTTGTACTTTTCCTGGCTACTATTCC
ATTTGTTACTGCTCAAAATGTCTTCAATGATTTCGCCCATTGTGGTATGA
GTGCAAAATTGAATAGAGATTTTTCACGTATCGTGGGTGGAACAGAGGCT
GAACGAAAAGAACTTCCATGGCAAGCAGCTTTATGGGGTGGCTCTGGAAA
GCCATATTGCGGTGGAACGTTGATCAGTAGCCAATATGTGGTCACTGCTG
CACACTGCGTTGATGGTAGTAGCCCACAGTATGTTGTACTTGGTGCACAT
GTCTTCGGCGGTGGCACTGAAAGTAAGGAACGACCCATCGGGGAATATAT
CTTTTATAGTCAACTCTCACTAATTCGAACGTCTACTTTTCGAATCTTTC
TGTAATTCCTACATCTGAAAAAATATATACAAATACTTTCCATAATTCAA
ATCTTAATATAATTCGAAGAAAATTGTTGAGACAGAATATTTTTTATTTG
CATTACGAGACTGACTATCTATGTTTAAAGATTGGATAAAGCTATAATGT
ATAATATTATAATGAAAAGTCTTTCATCAGCATATTTGGGAGCTCTAGTT
GTAACGATAATGTGTTTTTCTTCAACCAGATAACAGGCAAGTCCGACAAG
TCTCTAATGTAATTTCCCATGAGAATTACAATTCTCAAACACTGGCAAAC
GATATCGCTTTGATAAAGTTGAACAGCCCAGTAGAATATAACGACTATGT
CAAACCAGCTTGTGTACCAGAAAGTGGCGATGCACCAGATCCAAATACAG
AAGTTGTCATTTCTGGCTGGGGAACAACTCAGTCTGGAGGAAGTCAGCCC
GACACCCTTCGAGAAACTAAGGTTATTATAATAAAACTTATTAACCCTTA
CTTAAGCTCTTTTTGTTTTAAATGTGCTTTTTATTGTTTTGCTTCTTTCA
ACCTATGCTTGGATAATAGAAATAAACTTCGAAGTAATACAATTTTTGAG
AAAGATGGTTGCAAAATGGTTTGGAAATAAATCATTCTTCAATTTGAGAA
TGAGGAAGAAAAGTGAAGGACAAAAAAATTACTTTATTTCATTTGGCGAG
TTTTACAATGAATACGATGTTCTGCTCTTCATAAAAAAAAAATATCCATA
TGCCTTTAATTAAATGTCTGTATAGCACCAATTGTTATGGATCCTTGTTT
TGTTTGCTTAATTAACAATGTGCATTCACGCTATATAATCTAGAGCGTGA
TATTCTTTAACAATATTTATTTGGTACTGCAAAATTCACGATGCGGCTAT
TGTACTGTATGGAGTTTTTGACAAATTTCTTATTTTTTTTTCTTCTTTCT
ACATAGGTGTCTGTTGTAAGCAGAAGCAGTTGCCGGCAGAGTTACGGACA
AAATGCAATAGATGGAACCATGTTATGCGCTTCTTCTGCTGGAAAAGATT
CTTGTCAAGTGAGTTTTTACAAAGCCCATAACCATTCCCAGATAGATATT
TCTACACAGCCGAATTTCTTAATTTTGGCTGAAAAGGAAAGTACCCCACG
TTTGGGTTTTGATCGCTAGTTTCAGGCAATTTAAGTGAAGGGTTCTATTT
TCGAATATACATTGATTCCTTATAAAATTCTCCATAGAAAAGAAACTTGG
ACATTTATTGAATTTGTTAAACTGTGTTCGCCATTGCTTGATATGTTTGA
AATACAATTAATTCTTTTCTCTATGTGAATACTACTGAATTGCAAAATTT
ATATAACATTTCAGAAACAAAAGTTTATGAATAAATTGTTTTACCTATTC
TTTAATTTTTTCTAAATTACAGGGGGACAGCGGTGGCCCACTTGTCGAAA
GAAAAGCAAGTCCCAGTAATGGAGAACGTTTTTATTTGGCTGGTGTTGTT
AGCTGGGGATATGGTTGCGCAAGCCCTGGCTATCCAGGAGTTTATGCAGA
TGTTAGTGCTTTGAGAAGCTGGATTGAAGGCAAAGGACGTAAGGAGAATA
TTTTTTTATTTTCATCTTAAAAATGCAAAAAAAGTAAAAAACCAAAACTT
AATCTTTACCCAGTTGGCACACAACGTTGCTTCAACGTTCATCTAACGTT
ATACTGACGTTGTGAACGTTAAATAAACGTTAAAACAACGTTGTGTGCCA
GCTGGGTAAGTAAGTGATTATATTCATCTGGTGCCGTGGCTGTCGCCCAA
GAAAACTTCCGGAGAGAGCTTATGGAGGTATTAATGCTACGTACAATTTC
CAAATATTGTGAGAAATGGATGATGAATCAGTTATTAAAAACCCTTTCAA
ATATTACTGGTTTGACTTTTTCGAATTTGTATGTTTTTGATGAGTAGGTT
AACTTGTGTCTGCTTATTCTTTTTCACGTAGTTGTAGCAAAACCAGTGAC
ACCGGTCACTCCTGGACCAGTCACTCCAGAACCAGTCACTCCCGAACCAG
TCAATCCAGGACCAGTGAACGATTACTTCAATGATTTCTCCCATTGTGGT
TTGAGTGCAAAATTGAGTAGAGATTTTTCACGTATCGTGGGTGGAACAGA
GGCTGAACGAAAAGAACTTCCATGGCAAGCAGCTTTATGGAGTGGCTCTG
GAAAGCCATATTGCGGTGGAACGTTGATCAGTAGCCAATATGTGGTCACT
GCTGCACACTGCGTTGCTGGTAGTAACCCACCGAATGTTGTACTTGGTGC
ACATGTCTTCGACAGTGGCACTGAAAGTAAGGAACGACCCATCGGGGAAT
ATATCTTTTATAGTCAACTCTCACTAATTCGAATGTCTACTTTTCGAATC
TTTCTGTAATTCTTACAGCTGAAAAAATATATACAAATACTTTCCATAAT
TCAAATCTTAATATAATTCGAAGAAAATTGTTGAGACAGAATCTTTTTTA
TTTGCATTACGAGAGTGACTATCTATGTTTAAAGATTGGATAAAGCTATA
TAATATTATAATGAAAAGTCTTTCATCAGCATATTTGCGAGTTCTAGTAA
TAACGCTAATGTGTTTTTCTTCAACCAGATAACAGGCAAGTCCGACAAGT
CGCTAGTGTAATTTCCCATGAGAATTACAATTCTCAAACACTGGCAAACG
ATATTGCTTTGATAAAGTTGAAGAGCCCAGTAGAATATAACGACTATGTC
AAACCAGCTTGTGTACCAGAAAGTGGCGATGCACCAGATCCAAATACAGA
AGTTGTCATTTCTGGCTGGGGAACAACTCAGTCTGGAGGAAGTCAGCCCA
ACACCCTTCGAGAAACTAAGGTTATTATAATAAAACTTATTAACCCTTTC
AGTCCCGGAGTTTTCACAGCTACTTTCCCAGAGCCGTAAAATGAGTTTTT
GAATGCATTTACTTATGCTTCAATATCTCTGGAATCACACCCTTTTTCAC
TTATAGTATGAGGATCATTTTGATAGAAAGAAATTTGCAAAATGACGTCA
TCAGCGTGTCACGTGACCGGAGAAAGGCAAAAAAAGATTTGAAAACAGCA
ATTTTTTTCCATTCATCAATGATATTTTTTTATGAAAAAATGGTTTAAAC
CCATTCATTCTTCTGGATAAATGTTTGGCACAACAGTATCTACTAACTAA
AAAAAAAATTGCGTTTGATTAGCCCTCATAGAAAAATCATAATGATTGGT
AGAAGTTGTAAAAAATCCCATTTTCGGCCTTACAGATTTTGATTGCAAAA
CTTTTTGTAAATACTTTTGTAAACAAAACCTTTTACTCGAACAAGCTTTT
TTTACGCGGTTTTTTGCACACGACGCGGTATCTTATCTTCTTTGAAAGCT
AATTAAGGGCTCTGACCATAGTGAATTTTTCATAATTGCCGTGTTTAAAA
TGTGTTTTCTGACTGATGTAACCAACAAAACTATGGCTTGTTATACATTT
TCTGTTAGACAAACTATTCCTGAATCTGAAAATTCAAAAATTGCATTGAA
AAAATTTGATGAAGAAGAAAATGAAGACTTTTGCGAGGAAGAGTATTTCA
ACTTTGAAGAGCTTAGTTTCGTCGAAGAAAAAACATTTTGAAAAATTTTT
CGCAGTAGATGGTGTATCTTTTACCGAACAATAAAAATTTTTGCGGAAAA
TTTTTGTAAATGCTTCTTTGTCTCGAAATCTTCAAAATAGTGGTTTTTCA
TCAATTTTTCATCTGGATTTTGCTTAAAAAAACAGTCATAACTTTTGACA
CATCTTTTTAGATAAATTTTCCGCAAAATTTAAAATACTTCAATTCTTTG
CAGACAGTGTAAAGAAATTTTGAAACAAAAAAGTTAATTACCCATTAAAA
CTAAGCACTTTTTGTAAAAGAGGATGATGCAACATATTATTAACATCTTT
TTAAAGTTCATAACGTCATTTTTGCAATTAAATTTTTGATTAAAAAGCAA
TTTATAAAGGCAATTCTTTGTTAAAAGTGTTAAGGAACCTGAAATATAAC
TTTTATGTTCAAATACCAAAATCAATTTTTGGACTATGGTCAGAGCCCTT
AAAGACATATCTCTTTATTTCCCGTCAAAACATCACAATTTGAAAAAGAA
GTCCCGCTGTGCAGTCCTCTGGGAAAAATCGACGAGTCCAAAGGGACTGC
AGTGCGGTCGCCTGGGACTGAAAGGGTTAACCCTTACTTAAGCTCTTTTT
GTTTTAAATGTGCTCTATATTGTTTTGCTTCTTCAACATATGCTTAGATA
ATATACTGTTGGAAATAAAGTTCGAAGTAATACAATTTTTGAGAAAGATG
GTTGCAAAATGTTTTCGAAATAAATCATTCTTCAATTTGAGAATGAAGGA
GAAAAGTGAAGGACAAAAAAAATACTTTATTTCATTTGGCGAGTTTTACA
ATGAATACGATGTTCTGCTCTTCATAAAAAAATATCCATATGCCTTTAAT
TAAATGTATGTATAGCATGGATGTTATGGATCCTTGTTTTGTTTGCTTAA
TTAACAATGTGCATTCACGCTGTATAATCTAGAGCGTGATTTGCTTTAAC
AATATTTATTTGGCACTGCGAAATTCACGATGCGGCTATTGTACTGTTTG
GAGTTTTTGACAAATTTCTCATTTTTTTTATTCTTTCTACATAGGTGTCT
GTTGTAAGCAGAAGCAGTTGCCGGCAAAGTTACGGACAAAATGCA Coding sequence (CDS) from alignment at sc0000124_pilon:935747..940891- >XLOC_016085 ID=XLOC_016085|Name=XLOC_016085|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1230bp|location=Sequence derived from alignment at sc0000124_pilon:935747..940891- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTGTGTTCACATTCTCAGCTTTTGTACTTTTCCTGGCTACTATTCC
ATTTGTTACTGCTCAAAATGTCTTCAATGATTTCGCCCATTGTGGTATGA
GTGCAAAATTGAATAGAGATTTTTCACGTATCGTGGGTGGAACAGAGGCT
GAACGAAAAGAACTTCCATGGCAAGCAGCTTTATGGGGTGGCTCTGGAAA
GCCATATTGCGGTGGAACGTTGATCAGTAGCCAATATGTGGTCACTGCTG
CACACTGCGTTGATGGTAGTAGCCCACAGTATGTTGTACTTGGTGCACAT
GTCTTCGGCGGTGGCACTGAAAATGGGTGTGTTCACATTCTCAGCTTTTG
TACTTTTCCTGGCTACTATTCCATTTGTTACTGCTCAAAATGTCTTCAAT
GATTTCGCCCATTGTGGTATGAGTGCAAAATTGAATAGAGATTTTTCACG
TATCGTGGGTGGAACAGAGGCTGAACGAAAAGAACTTCCATGGCAAGCAG
CTTTATGGGGTGGCTCTGGAAAGCCATATTGCGGTGGAACGTTGATCAGT
AGCCAATATGTGGTCACTGCTGCACACTGCGTTGATGGTAGTAGCCCACA
GTATGTTGTACTTGGTGCACATGTCTTCGGCGGTGGCACTGAAAATAACA
GGCAAGTCCGACAAGTCGCTAGTGTAATTTCCCATGAGAATTACAATTCT
CAAACACTGGCAAACGATATTGCTTTGATAAAGTTGAAGAGCCCAGTAGA
ATATAACGACTATGTCAAACCAGCTTGTGTACCAGAAAGTGGCGATGCAC
CAGATCCAAATACAGAAGTTGTCATTTCTGGCTGGGGAACAACTCAGTCT
GGAGGAAGTCAGCCCAACACCCTTCGAGAAACTAAGATAACAGGCAAGTC
CGACAAGTCGCTAGTGTAATTTCCCATGAGAATTACAATTCTCAAACACT
GGCAAACGATATTGCTTTGATAAAGTTGAAGAGCCCAGTAGAATATAACG
ACTATGTCAAACCAGCTTGTGTACCAGAAAGTGGCGATGCACCAGATCCA
AATACAGAAGTTGTCATTTCTGGCTGGGGAACAACTCAGTCTGGAGGAAG
TCAGCCCAACACCCTTCGAGAAACTAAGGTGTCTGTTGTAAGCAGAAGCA
GTTGCCGGCAAAGTTACGGACAAAATGCAGTGTCTGTTGTAAGCAGAAGC
AGTTGCCGGCAAAGTTACGGACAAAATGCA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000124_pilon | genome | sc0000124_pilon:935747..940891 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 565-615:52 |
| Aaloc | 325-564:2116 |
| Aaloc | 1-321:5146 |
|
