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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000323_pilon:50138..52623+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015947 ID=XLOC_015947|Name=XLOC_015947|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2486bp|location=Sequence derived from alignment at sc0000323_pilon:50138..52623+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGAAAACCCTGAACAACCCCCACCACTAGAACGCGGATACGACTT
TGTGCTGGTAGTGAAAGAACAAGGGGTGGATTTCGAATGTTCTATTTGTC
GATCGATTCTCCGTGACGCACACTCCACACCGTGCCATCATGCTTTTTGT
CGTAATTGTTTGGCTACTTGGACCAAAGAGCTGGAACAAGGGAACAGGTA
AGCACTTTCACTCATTCTATGTTATCTTACTTTGCTAgccttaaaaagtt
tttctttctgaTATTATAAAAGCATTTCGATCTAGATGAACTTAGTTTTC
TCAAATTAAAATTagagaattacaaacaacaCAGCTAAAAAAGCCTGCCA
CAAAATTATAGACTCGATTAGTGTATAGACTGCAGTGTCTCTTTTAATTC
TAAACTCTATAAATCAAACGCCTCCTGAACTCGAAAAGTTTTCTAAGCCC
TTCAGTTAACATTGCcctataaaccttactccataactcaaactcCACTG
TATATCTTCTACTTTATAGACCAATCACTTGTCCCAATTGCAATTTGATC
TTTGACCCTAAAAAGGTGTGTATTATAAAGACAAAtaagacagacagaca
gacatggTCAAAGCAAAGATTCAATAACATCGATCAACATCAAATAATTT
CATTCTTAGGTCCAATACAATGGATTTGTAGATCGAATGGTGAAAACCAG
TCTAGAGATCAAATGTAAACAAGAGGATAAGGGATGTCACTGGCAAGGAG
AAATCATCGACTATCAGGTCCCAAGATTATTTCTATACTGCAATATCTTA
ACTGTAAAATGAAAGGCCCAAAAATCCaagttaaatttaaaaaatgaaac
agGTCGAATATTTTGCCACCTTTTCTTATAGATCCAGAATtacaaagaat
tttaaaatcaagtcTCCTAAGAATTACTACCACGACTGAAGGTCTAAGAC
TACCAGGTCACCAGCATCAACTTTGCATTTTAGGATCACCAAGGCACGTG
TGATTACGAGTTGGTCGAATGTCAAAACAAAGGATGTCGGGAAGTATTGT
CGAGAAAAGAATTGGTGCAACATCAAAAGGATTGTAAATATCGAACGACT
GAATGCCTCTATTGTAGGCTGATAAAGCCAATAATTGAAATGAAGGTATA
TAATTGAACACTAGTCTCAACTGAGACATTTTGGGtcgattttttacatg
aatggGCTAGTAATCTAGGAAGTTATGAAAATCTCTCGATTGTTTTAAGG
GGTTCCCAACCAGCCAGTTCGGCTGTTTATAGCCTTCCTTAACAGTACAT
TGGAAGTAGGAATCTCAGAAAATTCCACGCTGTCTCTGTCATCACGCACG
GTATATCCAGCGGGAGGAGTCTGCAAGGAGATCAAACCACGAAGTAACTG
TAGGTATAATCTTTCTTACAATCCTAACCATGGATCAAAtgtattgaaat
tgaaaagagaacGCTTTTTAACAGGACCACCATTCCGAATGCCAGATGAT
GAAAATTATTTGCCCAAATGAACAATGTGAAACTCAAGTGCTGCGCAAAG
ATGTAAGAGTTTTACCAAAAGGATTTCAAACAATTTGGTTCTcactttgg
atattcttaaattcaAAGCTTTCGTCTTGTTAATTTAGGGCTATCAACCA
ACTTGAAAATGGATGAACTCCTACTTCGTAAGGATATGAGCCGTTCTTCA
ATGGGAACAGCTCGTATCGTATCATATAATCAAATATGAAATGAAACATT
TCTTGGAAACTGTTTTTCACACCTACTCCACGCCTTTCTTTTCTACAGAT
CAAAGAGCATTTGAACAAAGATTGCCTTTATGAGAAAATTTCATGCTGCT
ATTCTGAGATTGGTTGCCAGAAAAAGGTTAGAATATAATAGTACATAACT
CAACTCTTTCCGAAATTTTTTAATTGCGAACAGcacagaaaatgaaaatt
tctccaGACCAATTTCGtcctaaaatatattttcccaAATCTTAGATTTT
TTGCACCTCACATCCAAGTTAGCCACTACATTGACATTGCATTTCCAGAG
CTTGAAGCTTTATTGACTGAATCATGCAATTGAAGAAATGTTTTCCTTCT
TCGAGGTGGAACGTTGTTTGATGGCTATCCATCAGAAAGATTTCCTTGTG
GAACATCAAATGATGATTTTCCAAGACAACAAGAAAGTCCAGCAATCACT
TCTggagaaaaataaacaactggaaGATGATTTgaaggcggaaaagaaaa
agaacgagaaattgaagggagaaatggaagtgatcaaaaagaaagttgaa
aatttggaaCAAGAACAACAAAGATGCAATGAACTTCACCGAAACATCTT
TTCAATCATTGATACGCTCATTTATTGGGTATCAAAAGGCTTCAAAAGCA
AAGAGAAGGTCATcaaagttttggggaaaatccaATTGTCTCATCTCATA
AAGGGACAATATAATTTACTTGGACGGATTGTCCCG Coding sequence (CDS) from alignment at sc0000323_pilon:50138..52623+ >XLOC_015947 ID=XLOC_015947|Name=XLOC_015947|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2100bp|location=Sequence derived from alignment at sc0000323_pilon:50138..52623+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGAAAACCCTGAACAACCCCCACCACTAGAACGCGGATACGACTT
TGTGCTGGTAGTGAAAGAACAAGGGGTGGATTTCGAATGTTCTATTTGTC
GATCGATTCTCCGTGACGCACACTCCACACCGTGCCATCATGCTTTTTGT
CGTAATTGTTTGGCTACTTGGACCAAAGAGCTGGAACAAGGGAACAGATG
GCAGAAAACCCTGAACAACCCCCACCACTAGAACGCGGATACGACTTTGT
GCTGGTAGTGAAAGAACAAGGGGTGGATTTCGAATGTTCTATTTGTCGAT
CGATTCTCCGTGACGCACACTCCACACCGTGCCATCATGCTTTTTGTCGT
AATTGTTTGGCTACTTGGACCAAAGAGCTGGAACAAGGGAACAGACCAAT
CACTTGTCCCAATTGCAATTTGATCTTTGACCCTAAAAAGACCAATCACT
TGTCCCAATTGCAATTTGATCTTTGACCCTAAAAAGGTCCAATACAATGG
ATTTGTAGATCGAATGGTGAAAACCAGTCTAGAGATCAAATGTAAACAAG
AGGATAAGGGATGTCACTGGCAAGGAGAAATCATCGACTATCAGGTCCAA
TACAATGGATTTGTAGATCGAATGGTGAAAACCAGTCTAGAGATCAAATG
TAAACAAGAGGATAAGGGATGTCACTGGCAAGGAGAAATCATCGACTATC
AGGATCACCAAGGCACGTGTGATTACGAGTTGGTCGAATGTCAAAACAAA
GGATGTCGGGAAGTATTGTCGAGAAAAGAATTGGTGCAACATCAAAAGGA
TTGTAAATATCGAACGACTGAATGCCTCTATTGTAGGCTGATAAAGCCAA
TAATTGAAATGAAGGATCACCAAGGCACGTGTGATTACGAGTTGGTCGAA
TGTCAAAACAAAGGATGTCGGGAAGTATTGTCGAGAAAAGAATTGGTGCA
ACATCAAAAGGATTGTAAATATCGAACGACTGAATGCCTCTATTGTAGGC
TGATAAAGCCAATAATTGAAATGAAGGACCACCATTCCGAATGCCAGATG
ATGAAAATTATTTGCCCAAATGAACAATGTGAAACTCAAGTGCTGCGCAA
AGATGACCACCATTCCGAATGCCAGATGATGAAAATTATTTGCCCAAATG
AACAATGTGAAACTCAAGTGCTGCGCAAAGATATCAAAGAGCATTTGAAC
AAAGATTGCCTTTATGAGAAAATTTCATGCTGCTATTCTGAGATTGGTTG
CCAGAAAAAGATCAAAGAGCATTTGAACAAAGATTGCCTTTATGAGAAAA
TTTCATGCTGCTATTCTGAGATTGGTTGCCAGAAAAAGGTGGAACGTTGT
TTGATGGCTATCCATCAGAAAGATTTCCTTGTGGAACATCAAATGATGAT
TTTCCAAGACAACAAGAAAGTCCAGCAATCACTTCTggagaaaaataaac
aactggaaGATGATTTgaaggcggaaaagaaaaagaacgagaaattgaag
ggagaaatggaagtgatcaaaaagaaagttgaaaatttggaaCAAGAACA
ACAAAGATGCAATGAACTTCACCGAAACATCTTTTCAATCATTGATACGC
TCATTTATTGGGTATCAAAAGGCTTCAAAAGCAAAGAGAAGGTCATcaaa
gttttggggaaaatccaATTGTCTCATCTCATAAAGGGACAATATAATTT
ACTTGGACGGATTGTCCCGGTGGAACGTTGTTTGATGGCTATCCATCAGA
AAGATTTCCTTGTGGAACATCAAATGATGATTTTCCAAGACAACAAGAAA
GTCCAGCAATCACTTCTggagaaaaataaacaactggaaGATGATTTgaa
ggcggaaaagaaaaagaacgagaaattgaagggagaaatggaagtgatca
aaaagaaagttgaaaatttggaaCAAGAACAACAAAGATGCAATGAACTT
CACCGAAACATCTTTTCAATCATTGATACGCTCATTTATTGGGTATCAAA
AGGCTTCAAAAGCAAAGAGAAGGTCATcaaagttttggggaaaatccaAT
TGTCTCATCTCATAAAGGGACAATATAATTTACTTGGACGGATTGTCCCG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000323_pilon | genome | sc0000323_pilon:50138..52623 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 670-1050:2106 |
| Aaloc | 592-669:1799 |
| Aaloc | 514-591:1475 |
| Aaloc | 352-513:984 |
| Aaloc | 244-351:660 |
| Aaloc | 199-243:521 |
| Aaloc | 1-195:1 |
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