XLOC_015939 (mRNA) -

Overview
NameXLOC_015939
Unique NameXLOC_015939
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000323_pilon:119535..121015-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015939 ID=XLOC_015939|Name=XLOC_015939|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1481bp|location=Sequence derived from alignment at sc0000323_pilon:119535..121015- (Clytia hemisphaerica_ch_hm2_pilon)
TTTATTTTGACTACAAACACAAATCAGATTGTATTTCATTGTTTACACAC TGTATATTTTATTGATCGCTTTTTAGTAAATAAGAAAATGTCATTGTTAG CAACTTCCTATCGTTATGAAATCGACGGAAGTAAACGAAAATCTTTACAA AAGGCTCTGGCACGAGAAGAGTCAAGAATCAAGGTTAGTGAAAATAAAGT GAATGAAGTTCTTTCAAATTGATATCCATGTTCCCTTTCAACCCTTAAAA ATAATAAGACTTTTCGTAACGTTCCTAGCTTTGCAAAATTTTAAACCAAT AGCATATAAAAATCTTTTTTTAGAAAAATGAATTGTGTTAAAAAGTTGAC AGATTTGGATGAAAAGGTTTGATTTTTCACTTATGAAAAGTTTGACATGA TTTCTCTCGTTCTTTGTAAAGGAAGATGAAATGTATGCAGAGCAAACACG AAGACTTGAATCGTAAGTCTTATAAATTCTTAATGCATTGAAATATCATA TCTTCCCAAACAGTGGTCTACCCAGTTTCTACTCAGTTTATCCATTATTT TCTGTATACCTCAAATTCTTTACTGATGAAAATGATTATTCCCAATCTTA TATATATAATCTAAGAATTTGTTTTTTTAGGAATCAAATGGTAAATGAAG TCAGCAAATGGACTGAAAATTTGGAGGAGGTAAATTTTCATTTAAATGTT TTTTTTGCACCCCAGGGTCCACTTGAAAATAAGGGATTCAAAATCTGTTA TTGATGTTTGTTCTCATTTCTAATTATATTTTTCAACTTTGATTGAGTAG CTTTTTTGTTATTTGGATTTCAAATATTCTTTTTCCAAAATGGCGACCTC GTCAAATGCTCCTAGTCTACTTCACTGGACTCTGGACTGGAGCGTCATAA AAAAAATCATCAAAAAGCAAAGTTAAGCCAGAAGTAGACTCTAGTCTACT TTTAAGTAGGCTATGCGCAAGTTCAATTTTTTTCATTATTTTCAAAACAC AGGCTAGTGGTAGACGTCGTGTGAAAATGGAAAAGGCTCTTATCAAAGAA GAAATCAGGTTGGGTAGCAAAGCTTCCATTATGGTAAGTCATTTCTTCCA TTTTCCATTCCTGTAGGTAGGTATCTTTTTCATTCAGGATAAAAATTTTG TTAACTCTAGGAATTTAAACCACCTTTCCTTGACCTAATGGGCTCTTCCA GAAAAATGTCTGGGGGTCAAAAGTCACAATTATTATATCCTCTATCCCAT CCTGCATAGTCTTCTCAAGAAATTAGTCACCTACTCCCGACTTTCTTCCC AAAACAGGAGCGTACGAATTTTTTATTCTCCTTTCGGTGTTTTATTTTAT CTTCTTATTTAGAATTTCCAATGTTTCAGGTACGGAAGGCTCAATTGAAG CAACTTCTTACGACAGAACACGCCAAGTATGAAGAAGAGCTGAACAAACT TGGTCTTGCTTTTTATCAAGAAAGATTATGA

Coding sequence (CDS) from alignment at sc0000323_pilon:119535..121015-

>XLOC_015939 ID=XLOC_015939|Name=XLOC_015939|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=912bp|location=Sequence derived from alignment at sc0000323_pilon:119535..121015- (Clytia hemisphaerica_ch_hm2_pilon)
TTTATTTTGACTACAAACACAAATCAGATTGTATTTCATTGTTTACACAC
TGTATATTTTATTGATCGCTTTTTAGTAAATAAGAAAATGTCATTGTTAG
CAACTTCCTATCGTTATGAAATCGACGGAAGTAAACGAAAATCTTTACAA
AAGGCTCTGGCACGAGAAGAGTCAAGAATCAAGTTTATTTTGACTACAAA
CACAAATCAGATTGTATTTCATTGTTTACACACTGTATATTTTATTGATC
GCTTTTTAGTAAATAAGAAAATGTCATTGTTAGCAACTTCCTATCGTTAT
GAAATCGACGGAAGTAAACGAAAATCTTTACAAAAGGCTCTGGCACGAGA
AGAGTCAAGAATCAAGGAAGATGAAATGTATGCAGAGCAAACACGAAGAC
TTGAATCGAAGATGAAATGTATGCAGAGCAAACACGAAGACTTGAATCGA
ATCAAATGGTAAATGAAGTCAGCAAATGGACTGAAAATTTGGAGGAGGAA
TCAAATGGTAAATGAAGTCAGCAAATGGACTGAAAATTTGGAGGAGGCTA
GTGGTAGACGTCGTGTGAAAATGGAAAAGGCTCTTATCAAAGAAGAAATC
AGGTTGGGTAGCAAAGCTTCCATTATGGCTAGTGGTAGACGTCGTGTGAA
AATGGAAAAGGCTCTTATCAAAGAAGAAATCAGGTTGGGTAGCAAAGCTT
CCATTATGGTACGGAAGGCTCAATTGAAGCAACTTCTTACGACAGAACAC
GCCAAGTATGAAGAAGAGCTGAACAAACTTGGTCTTGCTTTTTATCAAGA
AAGATTATGAGTACGGAAGGCTCAATTGAAGCAACTTCTTACGACAGAAC
ACGCCAAGTATGAAGAAGAGCTGAACAAACTTGGTCTTGCTTTTTATCAA
GAAAGATTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_015939XLOC_015939-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000323_pilongenomesc0000323_pilon:119535..121015 -
Properties
Property NameValue
Aaloc355-456:103
Aaloc274-354:480
Aaloc226-273:851
Aaloc184-222:1061
Aaloc1-183:1482