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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:3258350..3260439+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015864 ID=XLOC_015864|Name=XLOC_015864|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2090bp|location=Sequence derived from alignment at sc0000001_pilon:3258350..3260439+ (Clytia hemisphaerica_ch_hm2_pilon)
AGCTATCAACCAAGGAGACACTTCCAAAGCTTCAACCATCAATATCACAG
CGACCGCAGATGGAATGAACAGCAACAATCTATTTACCATACCCATCACC
CTACCCAATATCCGAACCATCTGTTAATGCAAGAGCCCGCGTGGAGACAT
CTTTGCCAAAGTGTTCGTCCTAATACAAACCCTCGTCACCAAATGAACTT
CCCTAACCTCAACGTTCAAGCCTCACAACATTACAATCATCATCGAACCA
ACCAATATAACAAGAACCGATTTAATGAAACAAACATAAAACAATCACAA
AGCAAAAGTCAGCCAACTCTAACACGGCAAACTTCTACAAAATCAACAGC
GGAGTTGCATGATGAAACTAAGAACTCTAAAATCAAAACTAACGAGAAGT
CTGTAAAAATTAACGCGAAAACAACGACGATAGTCAAAACCAGTCTTGAA
GCTCCAAATCCTACCTCTGATATTCCTAATACCGCCCCTCGTGCTAAAAG
TACCGCCCTCGAGGATGTCGATCCTTTATCTATGATCCTAATGAACAATT
TCGTTCAGAAACATCCGCCCACCAAAAAGAGTGATGAATTTTCCAAGTTC
TTGACTTTGGGAGTTGACGAAGGTAATTTGAAATCAAACTCTACCAATAG
TGCAAAAGTTCTTTCAAAGGATGAGACGAAGAATAAATTGAACGGGAATA
TGATTAAAGAATCTGCTCCTGTTGACGccattaaaactttttatgataGC
TCTACAAGTGCAAGTGATTGGCCCGAAACACCAAGAAAGTCGAGCACTCC
GCCAATCGCAAGGCTTAAATCTAAAGCCGAACCAATCAAAAATGACGAAT
CCAAAagtcaatcaatcaaaaatgaCGAACCAAAAGCCAACCGATCGGAA
AACTAGGATCCAAAGTTTCGAAAATCAACAGCCAATCAAAACCGAGACGG
TCACCAAAGAACAAACCTCCAATCGAGTGCATTAATCTTGTGCAATCGGA
AGAAGAAACAAAGCAGCGAGTGAATAGAGGAAATAAACAAGGGGAGGTCG
ATTTTTCTGTCGAATCTAACGAAGGAACGATTGAACACAAAAACAAGGAT
AACGAGGTTGTAATCATTGAAGATATTCCGAGAACTATTGATAATGTTAA
TGGTCAGAAAGAGCGAACGAAAGAACTAGAAATTGAACAGAAGGAAGAAG
CGAATGGCGAACGAAAGATTGAGAACAAATCAAAACGGAGAAGAGAAGGA
AAAGGTAAACTtagaaatgaaagaatgagTGACCGTGATATAATGCGaga
ggaagaaaaaaaacgaaatcgAATGAAAGAGCGAAAATCAAAACGAGAGA
ACACACGCCAACGAGGAGAAGATGAGGTGGAAAGATTCCGAGCTAGTGAC
AATGATAACaaacgaaagaacgagaatcaaataaaacgaataaacgagtt
aaaatttgaacaaaagaaagaatccaaagatgaacgaaaaagcgaatcaa
cgaaaaagaaacaaataacaaacgacgaagTCTCCAAAATGTTGGATAaa
ttaaaatcgaaaaagaaaagtagtGATGTCTTGAAGGAATATTTAAAGAT
TGGGAAAGGGAAGGACATGACTAACAAAGAGAGAGGAGAATTGTTTAAGA
ACTTGTTGaaaaaagaaacgaagaaaACAGATATGAACAATAATGTTGTT
ATAGTTGCCGAGAAGACAAAAGTTCGAACAAAATCGATTAAATTACTAAA
TCAGTCGAATCAAAAGCCTGCAGAAACTACaatgaaggaaaatgaaatgt
TACCGGTAGTTGTTGACGTTGAAATTACAAGATAATTACCGACAAATCGC
CCTGATGTCGTATTGAAATCCGATAAGGGTGTGAAATCATCAACTGAGTG
TGCATTGAAACTGAATAAACTCGATCCTGAACACCTCACCAAGAGTGGGA
CCaatgaaaataacaatttaaaaagtgacacaaaaaatattgaatcgACA
TCTCCCTTATCAATGGAATACAAATCCCAATTATCCACATCGCAAATGAT
AATTAACAATCTAGTTAGAATTGATCGTAAATGTTATCAA Coding sequence (CDS) from alignment at sc0000001_pilon:3258350..3260439+ >XLOC_015864 ID=XLOC_015864|Name=XLOC_015864|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4180bp|location=Sequence derived from alignment at sc0000001_pilon:3258350..3260439+ (Clytia hemisphaerica_ch_hm2_pilon)
AGCTATCAACCAAGGAGACACTTCCAAAGCTTCAACCATCAATATCACAG
CGACCGCAGATGGAATGAACAGCAACAATCTATTTACCATACCCATCACC
CTACCCAATATCCGAACCATCTGTTAATGCAAGAGCCCGCGTGGAGACAT
CTTTGCCAAAGTGTTCGTCCTAATACAAACCCTCGTCACCAAATGAACTT
CCCTAACCTCAACGTTCAAGCCTCACAACATTACAATCATCATCGAACCA
ACCAATATAACAAGAACCGATTTAATGAAACAAACATAAAACAATCACAA
AGCAAAAGTCAGCCAACTCTAACACGGCAAACTTCTACAAAATCAACAGC
GGAGTTGCATGATGAAACTAAGAACTCTAAAATCAAAACTAACGAGAAGT
CTGTAAAAATTAACGCGAAAACAACGACGATAGTCAAAACCAGTCTTGAA
GCTCCAAATCCTACCTCTGATATTCCTAATACCGCCCCTCGTGCTAAAAG
TACCGCCCTCGAGGATGTCGATCCTTTATCTATGATCCTAATGAACAATT
TCGTTCAGAAACATCCGCCCACCAAAAAGAGTGATGAATTTTCCAAGTTC
TTGACTTTGGGAGTTGACGAAGGTAATTTGAAATCAAACTCTACCAATAG
TGCAAAAGTTCTTTCAAAGGATGAGACGAAGAATAAATTGAACGGGAATA
TGATTAAAGAATCTGCTCCTGTTGACGccattaaaactttttatgataGC
TCTACAAGTGCAAGTGATTGGCCCGAAACACCAAGAAAGTCGAGCACTCC
GCCAATCGCAAGGCTTAAATCTAAAGCCGAACCAATCAAAAATGACGAAT
CCAAAagtcaatcaatcaaaaatgaCGAACCAAAAGCCAACCGATCGGAA
AACTAGGATCCAAAGTTTCGAAAATCAACAGCCAATCAAAACCGAGACGG
TCACCAAAGAACAAACCTCCAATCGAGTGCATTAATCTTGTGCAATCGGA
AGAAGAAACAAAGCAGCGAGTGAATAGAGGAAATAAACAAGGGGAGGTCG
ATTTTTCTGTCGAATCTAACGAAGGAACGATTGAACACAAAAACAAGGAT
AACGAGGTTGTAATCATTGAAGATATTCCGAGAACTATTGATAATGTTAA
TGGTCAGAAAGAGCGAACGAAAGAACTAGAAATTGAACAGAAGGAAGAAG
CGAATGGCGAACGAAAGATTGAGAACAAATCAAAACGGAGAAGAGAAGGA
AAAGGTAAACTtagaaatgaaagaatgagTGACCGTGATATAATGCGaga
ggaagaaaaaaaacgaaatcgAATGAAAGAGCGAAAATCAAAACGAGAGA
ACACACGCCAACGAGGAGAAGATGAGGTGGAAAGATTCCGAGCTAGTGAC
AATGATAACaaacgaaagaacgagaatcaaataaaacgaataaacgagtt
aaaatttgaacaaaagaaagaatccaaagatgaacgaaaaagcgaatcaa
cgaaaaagaaacaaataacaaacgacgaagTCTCCAAAATGTTGGATAaa
ttaaaatcgaaaaagaaaagtagtGATGTCTTGAAGGAATATTTAAAGAT
TGGGAAAGGGAAGGACATGACTAACAAAGAGAGAGGAGAATTGTTTAAGA
ACTTGTTGaaaaaagaaacgaagaaaACAGATATGAACAATAATGTTGTT
ATAGTTGCCGAGAAGACAAAAGTTCGAACAAAATCGATTAAATTACTAAA
TCAGTCGAATCAAAAGCCTGCAGAAACTACaatgaaggaaaatgaaatgt
TACCGGTAGTTGTTGACGTTGAAATTACAAGATAATTACCGACAAATCGC
CCTGATGTCGTATTGAAATCCGATAAGGGTGTGAAATCATCAACTGAGTG
TGCATTGAAACTGAATAAACTCGATCCTGAACACCTCACCAAGAGTGGGA
CCaatgaaaataacaatttaaaaagtgacacaaaaaatattgaatcgACA
TCTCCCTTATCAATGGAATACAAATCCCAATTATCCACATCGCAAATGAT
AATTAACAATCTAGTTAGAATTGATCGTAAATGTTATCAAAGCTATCAAC
CAAGGAGACACTTCCAAAGCTTCAACCATCAATATCACAGCGACCGCAGA
TGGAATGAACAGCAACAATCTATTTACCATACCCATCACCCTACCCAATA
TCCGAACCATCTGTTAATGCAAGAGCCCGCGTGGAGACATCTTTGCCAAA
GTGTTCGTCCTAATACAAACCCTCGTCACCAAATGAACTTCCCTAACCTC
AACGTTCAAGCCTCACAACATTACAATCATCATCGAACCAACCAATATAA
CAAGAACCGATTTAATGAAACAAACATAAAACAATCACAAAGCAAAAGTC
AGCCAACTCTAACACGGCAAACTTCTACAAAATCAACAGCGGAGTTGCAT
GATGAAACTAAGAACTCTAAAATCAAAACTAACGAGAAGTCTGTAAAAAT
TAACGCGAAAACAACGACGATAGTCAAAACCAGTCTTGAAGCTCCAAATC
CTACCTCTGATATTCCTAATACCGCCCCTCGTGCTAAAAGTACCGCCCTC
GAGGATGTCGATCCTTTATCTATGATCCTAATGAACAATTTCGTTCAGAA
ACATCCGCCCACCAAAAAGAGTGATGAATTTTCCAAGTTCTTGACTTTGG
GAGTTGACGAAGGTAATTTGAAATCAAACTCTACCAATAGTGCAAAAGTT
CTTTCAAAGGATGAGACGAAGAATAAATTGAACGGGAATATGATTAAAGA
ATCTGCTCCTGTTGACGccattaaaactttttatgataGCTCTACAAGTG
CAAGTGATTGGCCCGAAACACCAAGAAAGTCGAGCACTCCGCCAATCGCA
AGGCTTAAATCTAAAGCCGAACCAATCAAAAATGACGAATCCAAAagtca
atcaatcaaaaatgaCGAACCAAAAGCCAACCGATCGGAAAACTAGGATC
CAAAGTTTCGAAAATCAACAGCCAATCAAAACCGAGACGGTCACCAAAGA
ACAAACCTCCAATCGAGTGCATTAATCTTGTGCAATCGGAAGAAGAAACA
AAGCAGCGAGTGAATAGAGGAAATAAACAAGGGGAGGTCGATTTTTCTGT
CGAATCTAACGAAGGAACGATTGAACACAAAAACAAGGATAACGAGGTTG
TAATCATTGAAGATATTCCGAGAACTATTGATAATGTTAATGGTCAGAAA
GAGCGAACGAAAGAACTAGAAATTGAACAGAAGGAAGAAGCGAATGGCGA
ACGAAAGATTGAGAACAAATCAAAACGGAGAAGAGAAGGAAAAGGTAAAC
TtagaaatgaaagaatgagTGACCGTGATATAATGCGagaggaagaaaaa
aaacgaaatcgAATGAAAGAGCGAAAATCAAAACGAGAGAACACACGCCA
ACGAGGAGAAGATGAGGTGGAAAGATTCCGAGCTAGTGACAATGATAACa
aacgaaagaacgagaatcaaataaaacgaataaacgagttaaaatttgaa
caaaagaaagaatccaaagatgaacgaaaaagcgaatcaacgaaaaagaa
acaaataacaaacgacgaagTCTCCAAAATGTTGGATAaattaaaatcga
aaaagaaaagtagtGATGTCTTGAAGGAATATTTAAAGATTGGGAAAGGG
AAGGACATGACTAACAAAGAGAGAGGAGAATTGTTTAAGAACTTGTTGaa
aaaagaaacgaagaaaACAGATATGAACAATAATGTTGTTATAGTTGCCG
AGAAGACAAAAGTTCGAACAAAATCGATTAAATTACTAAATCAGTCGAAT
CAAAAGCCTGCAGAAACTACaatgaaggaaaatgaaatgtTACCGGTAGT
TGTTGACGTTGAAATTACAAGATAATTACCGACAAATCGCCCTGATGTCG
TATTGAAATCCGATAAGGGTGTGAAATCATCAACTGAGTGTGCATTGAAA
CTGAATAAACTCGATCCTGAACACCTCACCAAGAGTGGGACCaatgaaaa
taacaatttaaaaagtgacacaaaaaatattgaatcgACATCTCCCTTAT
CAATGGAATACAAATCCCAATTATCCACATCGCAAATGATAATTAACAAT
CTAGTTAGAATTGATCGTAAATGTTATCAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:3258350..3260439 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1705-2094:1701 |
| Aaloc | 889-1701:888 |
| Aaloc | 1-885:1 |
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