|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:3242056..3243657+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015860 ID=XLOC_015860|Name=XLOC_015860|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1602bp|location=Sequence derived from alignment at sc0000001_pilon:3242056..3243657+ (Clytia hemisphaerica_ch_hm2_pilon)
atGGGAAAGCCTTGGACTTTATCTCCTGACAAGAACAAGAAttggaagaa
aaagaaatatgttGAAAATCGACCAATCAAATGGTCTCGCTTCGATTATG
AACCAATCAAAACGACTCAAGAAGAGAATCCGTCAAGCTGGAATAAAGAA
CCAATCAAAACACCCGAAAATGagattcaaccaatcaaatcaccCCAATT
CGATCGACAGCCAATCAAAACGCCCAAGAATAGTGATAACCAATTAATGG
CGAGTTCTGAAAAGATGACGGAAGGAATCAAATTCCTTTGTCCAGAATGC
GCCCGATTTGTGTTTAATTTAGAACGTCATCTTGAAAAGAAGCATGAtta
taataaacaaaaaattgaacttgTTCTTTTGAATGTTCTGAAATATAAGA
AAATCAAGTATGTTTGTCCTGAGTGTAACGCTGAAGTTTCAGATTTGGAA
AGCCATTTGAAAGCTGGGCATAGACATACtacgaaaaaattgaaatggga
AAATGAAAGCCTTCGGTCACAAAAATGGTTCGCTTCTAAGGACTTCGAAA
TTGAGAGAAGCTATGAGAAAACCAGTCCTTCTCCCAAAACTAATTTCGAA
GCCTCTAAATTCGAAGGGGCTTTCGAACAATCTATGCAATTACGATTTCA
CGgtttcaaaaatgataaaaacagaaaattcgGAGAGTCAAAGTTTGTGA
GCATCGATCACTTCAATCGAAAATCTAGAATCGAATCAGTCGATAAATTA
ACTTCAAATCGAAAGAGTCCTGTCATTCTTTCCCTTTCGAACTATGGCGA
TACGAAATACGAACGAATCGAGTTATGTCAGAAGGACCATCAAGGGATCC
ACACCCCTTTACCTTGCGAGATATGCAACAATAAATGGCTTTGTAGACTT
GATACACATTTGAAAAATCACCATCCACACATGAATGTCTTTGATCAGAA
AATGTTGATTAAAGAAATGTTACAGAAACATTGGCAAGGGAAAAGAACCG
CAGCCAAAGATTTCAATCTTGGTGAATTTTTGAGTGGTAAACGTCGGTTC
TCCAAAAATGAACAATTTGAAAAGACATCTAATAAATTTTCGTCTAAAGA
TTCAAACAGACCGACTTCTCCTCTCTCGACGTACTCCTGGAGTTCAAAAG
ATTCGAGTAGACCAGTATCTCCGGACCACATTCATTCCAGTGGCAGACCC
GTCTCACCTGATTTCACGCTcttaaaaaactcaaaacaCTCAGACAGATC
CCTATCACCAAATATCACGTTTTCAAAGAACTTCAAAGATTCGACCGAAA
TTTCCACCATTTCTTCTGATCTTCTGAATAGATCAATTTCACCCATTCGA
TCGACATCGGTAGCAGATATTTCCCCGAATCGAGCATCAAACAAAAATCG
ATTCAGTAGACGACAGAGATCATTATCCCCTGAGCTGTCATCAAACTCAG
AAATGGATACCTTAAAGAAACGTACACATCACGAAAGGACACCAAAGAGG
AGAATGAAACATAGATCAATATCCCCAATCATGAATCCCCAAAACCGTAA
ACAATCAACCCTGAAAATTGATGATGAGTTTCAGTCGCTGTCAAAGATCC
GA Coding sequence (CDS) from alignment at sc0000001_pilon:3242056..3243657+ >XLOC_015860 ID=XLOC_015860|Name=XLOC_015860|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3102bp|location=Sequence derived from alignment at sc0000001_pilon:3242056..3243657+ (Clytia hemisphaerica_ch_hm2_pilon)
atGGGAAAGCCTTGGACTTTATCTCCTGACAAGAACAAGAAttggaagaa
aaagaaatatgttGAAAATCGACCAATCAAATGGTCTCGCTTCGATTATG
AACCAATCAAAACGACTCAAGAAGAGAATCCGTCAAGCTGGAATAAAGAA
CCAATCAAAACACCCGAAAATGagattcaaccaatcaaatcaccCCAATT
CGATCGACAGCCAATCAAAACGCCCAAGAATAGTGATAACCAATTAATGG
CGAGTTCTGAAAAGATGACGGAAGGAATCAAATTCCTTTGTCCAGAATGC
GCCCGATTTGTGTTTAATTTAGAACGTCATCTTGAAAAGAAGCATGAtta
taataaacaaaaaattgaacttgTTCTTTTGAATGTTCTGAAATATAAGA
AAATCAAGTATGTTTGTCCTGAGTGTAACGCTGAAGTTTCAGATTTGGAA
AGCCATTTGAAAGCTGGGCATAGACATACtacgaaaaaattgaaatggga
AAATGAAAGCCTTCGGTCACAAAAATGGTTCGCTTCTAAGGACTTCGAAA
TTGAGAGAAGCTATGAGAAAACCAGTCCTTCTCCCAAAACTAATTTCGAA
GCCTCTAAATTCGAAGGGGCTTTCGAACAATCTATGCAATTACGATTTCA
CGgtttcaaaaatgataaaaacagaaaattcgGAGAGTCAAAGTTTGTGA
GCATCGATCACTTCAATCGAAAATCTAGAATCGAATCAGTCGATAAATTA
ACTTCAAATCGAAAGAGTCCTGTCATTCTTTCCCTTTCGAACTATGGCGA
TACGAAATACGAACGAATCGAGTTATGTCAGAAGGACCATCAAGGGATCC
ACACCCCTTTACCTTGCGAGATATGCAACAATAAATGGCTTTGTAGACTT
GATACACATTTGAAAAATCACCATCCACACATGAATGTCTTTGATCAGAA
AATGTTGATTAAAGAAATGTTACAGAAACATTGGCAAGGGAAAAGAACCG
CAGCCAAAGATTTCAATCTTGGTGAATTTTTGAGTGGTAAACGTCGGTTC
TCCAAAAATGAACAATTTGAAAAGACATCTAATAAATTTTCGTCTAAAGA
TTCAAACAGACCGACTTCTCCTCTCTCGACGTACTCCTGGAGTTCAAAAG
ATTCGAGTAGACCAGTATCTCCGGACCACATTCATTCCAGTGatGGGAAA
GCCTTGGACTTTATCTCCTGACAAGAACAAGAAttggaagaaaaagaaat
atgttGAAAATCGACCAATCAAATGGTCTCGCTTCGATTATGAACCAATC
AAAACGACTCAAGAAGAGAATCCGTCAAGCTGGAATAAAGAACCAATCAA
AACACCCGAAAATGagattcaaccaatcaaatcaccCCAATTCGATCGAC
AGCCAATCAAAACGCCCAAGAATAGTGATAACCAATTAATGGCGAGTTCT
GAAAAGATGACGGAAGGAATCAAATTCCTTTGTCCAGAATGCGCCCGATT
TGTGTTTAATTTAGAACGTCATCTTGAAAAGAAGCATGAttataataaac
aaaaaattgaacttgTTCTTTTGAATGTTCTGAAATATAAGAAAATCAAG
TATGTTTGTCCTGAGTGTAACGCTGAAGTTTCAGATTTGGAAAGCCATTT
GAAAGCTGGGCATAGACATACtacgaaaaaattgaaatgggaAAATGAAA
GCCTTCGGTCACAAAAATGGTTCGCTTCTAAGGACTTCGAAATTGAGAGA
AGCTATGAGAAAACCAGTCCTTCTCCCAAAACTAATTTCGAAGCCTCTAA
ATTCGAAGGGGCTTTCGAACAATCTATGCAATTACGATTTCACGgtttca
aaaatgataaaaacagaaaattcgGAGAGTCAAAGTTTGTGAGCATCGAT
CACTTCAATCGAAAATCTAGAATCGAATCAGTCGATAAATTAACTTCAAA
TCGAAAGAGTCCTGTCATTCTTTCCCTTTCGAACTATGGCGATACGAAAT
ACGAACGAATCGAGTTATGTCAGAAGGACCATCAAGGGATCCACACCCCT
TTACCTTGCGAGATATGCAACAATAAATGGCTTTGTAGACTTGATACACA
TTTGAAAAATCACCATCCACACATGAATGTCTTTGATCAGAAAATGTTGA
TTAAAGAAATGTTACAGAAACATTGGCAAGGGAAAAGAACCGCAGCCAAA
GATTTCAATCTTGGTGAATTTTTGAGTGGTAAACGTCGGTTCTCCAAAAA
TGAACAATTTGAAAAGACATCTAATAAATTTTCGTCTAAAGATTCAAACA
GACCGACTTCTCCTCTCTCGACGTACTCCTGGAGTTCAAAAGATTCGAGT
AGACCAGTATCTCCGGACCACATTCATTCCAGTGACAGATCCCTATCACC
AAATATCACGTTTTCAAAGAACTTCAAAGATTCGACCGAAATTTCCACCA
TTTCTTCTGATCTTCTGAATAGATCAATTTCACCCATTCGATCGACATCG
GTAGCAGATATTTCCCCGAATCGAGCATCAAACAAAAATCGATTCAGTAG
ACGACAGAGATCATTATCCCCTGAGCTGTCATCAAACTCAGAAATGGATA
CCTTAAAGAAACGTACACATCACGAAAGGACACCAAAGAGGAGAATGAAA
CATAGATCAATATCCCCAATCATGAATCCCCAAAACCGTAAACAATCAAC
CCTGAAAATTGATGATGAGTTTCAGTCGCTGTCAAAGATCCGAACAGATC
CCTATCACCAAATATCACGTTTTCAAAGAACTTCAAAGATTCGACCGAAA
TTTCCACCATTTCTTCTGATCTTCTGAATAGATCAATTTCACCCATTCGA
TCGACATCGGTAGCAGATATTTCCCCGAATCGAGCATCAAACAAAAATCG
ATTCAGTAGACGACAGAGATCATTATCCCCTGAGCTGTCATCAAACTCAG
AAATGGATACCTTAAAGAAACGTACACATCACGAAAGGACACCAAAGAGG
AGAATGAAACATAGATCAATATCCCCAATCATGAATCCCCAAAACCGTAA
ACAATCAACCCTGAAAATTGATGATGAGTTTCAGTCGCTGTCAAAGATCC
GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:3242056..3243657 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1276-1545:1333 |
| Aaloc | 1195-1275:1246 |
| Aaloc | 1-1191:1 |
|
