|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:3216812..3219899+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015850 ID=XLOC_015850|Name=XLOC_015850|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3088bp|location=Sequence derived from alignment at sc0000001_pilon:3216812..3219899+ (Clytia hemisphaerica_ch_hm2_pilon)
aaggttttatttttacataagtgttcccgtttcatatcagacacatattt
catatcaggacagtgtcttgctattgttatgttatgctgatataagtgaa
aaaatgtttttcttttcctctttcttaccaaatcttgctccacatccgtg
tcaatccaatgtgaaaaagcttgtgaattaaaattgatgagtaggcaaac
gatatcactcttatttaaaaacaaaacctttaagatttcACATAGGAGAA
GAATCCATTGGGTCCTGTGAATAAATATGAAATGCaaactaccgggtgac
ccacgaaaaagttcggacgtttctcggcgtcttgaggccgataaaatgtc
ccaaagtgcttggagttttattatttagaaagtagatatcctaacttaaa
atccgagccattactttttaaatttgacgcacaagttccctagttatgag
cttttaaactcaaaattcacttttcggaaagtgtaaaaaacaggtaaaaa
aggggtatcaaattaggtatttttagacgtttttgatatacagtttttga
gaaaattccttgaaagtgccaattttgataaaaactagtcttggtttaaa
caaaaactactttaaaaggtgtttttaataattattaatgtcataaaact
cgttaaataagtcaatttataaaagattttctaattgattgcattaattt
aatacctcttttttacgtgttttttacactttccgaaaagtgaattttga
gtttaaaaggtcataagtagagaactagttgatcaaatttaaaaagtgat
agctcaaattttaagttaggatatctactttttaaataccaaaattccga
gcactttgggacatttgttcggcctcaagacgccgagaaaggtccgaact
ttttcgtgggtcacccggtatatatattatattaaaatactattaaaatt
tttttcactaaattataacttactttcattttttgtcgtttttagatgag
aaaaaaaaagaatgaaaacaaaaataattggGTATAGAAGAAGACACAAC
GTTCACCATTATGGGGCCACCAAATTTTCCTGGAGGAGATTGTATTAAAC
AAACAACTGTTAGCCAACCAAGTTCAATACCTTATATTAGCGCTATTACT
ACTTCAAATAGTGTAGTCTTGCCGACGAAATATATAACTGCCAATACATT
GTATCCCTGTACTAAAGGAAGAACGAATCGATTGAGTCGAAAAGAGCGCC
GTGAACATCAGTTGAAGGAAGCTCAAAGAGCAGGGTGTACCAGGAAAAAG
CGAAACAGAGGAAAACCTCCTGACCATTCTTCTACAGCCATGCAAAAGCA
CGGAAGGAGTTTAAAGCAATgtgaaacgaaaatgaaaaacaatgacGATT
TTAAGGTAGCTGAGGCGCAAAAGATCAAAATTGGAAGAAGACAAAAAGAT
ATAACTTTTCAATGTCCTGTGTGTTCTTTGGAGGTTGCACGTCTAAGGGA
ACATATGGAACAGAACCATAAAATGAAAAGACAGGACTGTGTGCATGAAG
AAACAAGACAACTCCGTGTCAGGTTTTGTCAGGAAAGTCACGACGGTGTG
CATAGGGTCTTACCCTGCTGTGAATGTAACACGTGGCTTTGCGACAGTGT
TTTTAAGAAACATATGAAGAAGGTTCACCACAAGGGTGACAGTgatattt
taacaattttaaatGACAGAGCTTTTGTTAAATCTAAATTAATGgataaa
tttggaaatattCTTGATCCCTCAAAACGATTGGTTGAGAAAGCGGTTTC
AGAAACATTATCTACCACTTCAAATAAAGTTGAAGATTCCATTCTTCAGA
CAGctagaaaagtttcattatcTTCCTCAGAAGTATCGGTTAGGAAGGTG
GtttcatcaaaatcttcaaatcttTCAATCAAGACTGAAATTTCTACTAA
ATCTGCTGCTGCTCCTGCTATAAAGACTAATTATAAAGATAATGGAGCGA
GATCTGTAAGAGTTCCCTTGAGAACTAAATCCGATGTCGGTGAGCTCACG
TGTACTTACAGATTTTTCGGCGTTGATAATTTTGTACCAAAGAATATACC
TACCGTTCCTTTAAGTTCAGCTATTGTTCTGCAAAATAATCATTCTGTAC
GGAACACATTCATTATTCCGAAAACTGTATCAACTGTTTCGCAGAATAAA
CCTTCTGCTCCGAGAAATATTCCAACTGTTCCGCAGAATACAACTTTGAT
TCCGAGAAATATACCAATTGTTTCGCAAAATACAACTGTTCCAAAAAACA
TTCCAACTGTTTCGCAAAATACAACTGTTCTGAAAAATATTCCAACTGTT
CCGCAGGATACCGCTTCTATTCCGAGAAATATTCTAACTGCTTCACAGAA
TACACCTGTTCCAAGATATGTACCAACTGTTCTGCAAAATAAACCTGTTC
CGAGAAATATTCCAACTGTTCCGCAGAATACAACTTCACAGAATACACCT
GTTTCAAGAAATGTACCAACTGTTCCGCAGGATGCAGCTGTTCCAAGAAT
TATTCCAACTGTTTCGCAGAATACAGCTTCTATTCCGAGAAATATTCCAA
CTGTTCCACAGAATACACCTGTTCCAAGAAATATTCCAACTGTTCCACAG
AATACACCTGTTCCAAGAAATGTACCAATTGTTCCGCAGAATAGACCTGC
TCCGAGAAATATTCAAACTGTTCTGCAGAATACAGCTTCTATTCCGAGAA
ATATTCCAACTGTTCCACAGAATACACCTGTTCCGAGAAATATACAAACT
GCTCCACAGAATACACCTGTTCCGAGAAATATTCCAACTGTTCCGCAAAG
TACACCTTTTTCAAGAAATATTCCAACTGTTCTGCAAAGTACACCTTTTT
CAAGAAGTATTCCAACTGTTCTGCAAAGTACACTTTTTTCAAGAAGTATT
TCAACTGTTCCGCAAAGTACACCTTTTTCAAGAAGTATACCAATAGTTCC
GCAAAATACACCTACTGTTCCAAAGATTATTCCATTTATCACGAAAAGTA
CGACATCTCCCAAATTGATAGAATCCGTcccaaaaaat Coding sequence (CDS) from alignment at sc0000001_pilon:3216812..3219899+ >XLOC_015850 ID=XLOC_015850|Name=XLOC_015850|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3354bp|location=Sequence derived from alignment at sc0000001_pilon:3216812..3219899+ (Clytia hemisphaerica_ch_hm2_pilon)
aaggttttatttttacataagtgttcccgtttcatatcagacacatattt
catatcagaaggttttatttttacataagtgttcccgtttcatatcagac
acatatttcatatcagCCATGCAAAAGCACGGAAGGAGTTTAAAGCAATg
tgaaacgaaaatgaaaaacaatgacGATTTTAAGGTAGCTGAGGCGCAAA
AGATCAAAATTGGAAGAAGACAAAAAGATATAACTTTTCAATGTCCTGTG
TGTTCTTTGGAGGTTGCACGTCTAAGGGAACATATGGAACAGAACCATAA
AATGAAAAGACAGGACTGTGTGCATGAAGAAACAAGACAACTCCGTGTCA
GGTTTTGTCAGGAAAGTCACGACGGTGTGCATAGGGTCTTACCCTGCTGT
GAATGTAACACGTGGCTTTGCGACAGTGTTTTTAAGAAACATATGAAGAA
GGTTCACCACAAGGGTGACAGTgatattttaacaattttaaatGACAGAG
CTTTTGTTAAATCTAAATTAATGgataaatttggaaatattCTTGATCCC
TCAAAACGATTGGTTGAGAAAGCGGTTTCAGAAACATTATCTACCACTTC
AAATAAAGTTGAAGATTCCATTCTTCAGACAGctagCCATGCAAAAGCAC
GGAAGGAGTTTAAAGCAATgtgaaacgaaaatgaaaaacaatgacGATTT
TAAGGTAGCTGAGGCGCAAAAGATCAAAATTGGAAGAAGACAAAAAGATA
TAACTTTTCAATGTCCTGTGTGTTCTTTGGAGGTTGCACGTCTAAGGGAA
CATATGGAACAGAACCATAAAATGAAAAGACAGGACTGTGTGCATGAAGA
AACAAGACAACTCCGTGTCAGGTTTTGTCAGGAAAGTCACGACGGTGTGC
ATAGGGTCTTACCCTGCTGTGAATGTAACACGTGGCTTTGCGACAGTGTT
TTTAAGAAACATATGAAGAAGGTTCACCACAAGGGTGACAGTgatatttt
aacaattttaaatGACAGAGCTTTTGTTAAATCTAAATTAATGgataaat
ttggaaatattCTTGATCCCTCAAAACGATTGGTTGAGAAAGCGGTTTCA
GAAACATTATCTACCACTTCAAATAAAGTTGAAGATTCCATTCTTCAGAC
AGctagGGTGGtttcatcaaaatcttcaaatcttTCAATCAAGACTGAAA
TTTCTACTAAATCTGCTGCTGCTCCTGCTATAAAGACTAATTATAAAGAT
AATGGAGCGAGATCTGTAAGAGTTCCCTTGAGAACTAAATCCGATGTCGG
TGAGCTCACGTGTACTTACAGATTTTTCGGCGTTGATAATTTTGTACCAA
AGAATATACCTACCGTTCCTTTAAGTTCAGCTATTGTTCTGCAAAATAAT
CATTCTGTACGGAACACATTCATTATTCCGAAAACTGTATCAACTGTTTC
GCAGAATAAACCTTCTGCTCCGAGAAATATTCCAACTGTTCCGCAGAATA
CAACTTTGATTCCGAGAAATATACCAATTGTTTCGCAAAATACAACTGTT
CCAAAAAACATTCCAACTGTTTCGCAAAATACAACTGTTCTGAAAAATAT
TCCAACTGTTCCGCAGGATACCGCTTCTATTCCGAGAAATATTGGTGGtt
tcatcaaaatcttcaaatcttTCAATCAAGACTGAAATTTCTACTAAATC
TGCTGCTGCTCCTGCTATAAAGACTAATTATAAAGATAATGGAGCGAGAT
CTGTAAGAGTTCCCTTGAGAACTAAATCCGATGTCGGTGAGCTCACGTGT
ACTTACAGATTTTTCGGCGTTGATAATTTTGTACCAAAGAATATACCTAC
CGTTCCTTTAAGTTCAGCTATTGTTCTGCAAAATAATCATTCTGTACGGA
ACACATTCATTATTCCGAAAACTGTATCAACTGTTTCGCAGAATAAACCT
TCTGCTCCGAGAAATATTCCAACTGTTCCGCAGAATACAACTTTGATTCC
GAGAAATATACCAATTGTTTCGCAAAATACAACTGTTCCAAAAAACATTC
CAACTGTTTCGCAAAATACAACTGTTCTGAAAAATATTCCAACTGTTCCG
CAGGATACCGCTTCTATTCCGAGAAATATTAATACAACTTCACAGAATAC
ACCTGTTTCAAGAAATGTACCAACTGTTCCGCAGGATGCAGCTGTTCCAA
GAATTATTCCAACTGTTTCGCAGAATACAGCTTCTATTCCGAGAAATATT
CCAACTGTTCCACAGAATACACCTGTTCCAAGAAATATTCCAACTGTTCC
ACAGAATACACCTGTTCCAAGAAATGTACCAATTGTTCCGCAGAATAGAC
CTGCTCCGAGAAATATTCAAACTGTTCTGCAGAATACAGCTTCTATTCCG
AGAAATATTCCAACTGTTCCACAGAATACACCTGTTCCGAGAAATATACA
AACTGCTCCACAGAATACACCTGTTCCGAGAAATATTCCAACTGTTCCGC
AAAGTACACCTTTTTCAAGAAATATTCCAACTGTTCTGCAAAGTACACCT
TTTTCAAGAAGTATTCCAACTGTTCTGCAAAGTACACTTTTTTCAAGAAG
TATTTCAACTGTTCCGCAAAGTACACCTTTTTCAAGAAGTATACCAATAG
TTCCGCAAAATACACCTACTGTTCCAAAGATTATTCCATTTATCACGAAA
AGTACGACATCTCCCAAATTGATAGAATCCGTcccaaaaaatAATACAAC
TTCACAGAATACACCTGTTTCAAGAAATGTACCAACTGTTCCGCAGGATG
CAGCTGTTCCAAGAATTATTCCAACTGTTTCGCAGAATACAGCTTCTATT
CCGAGAAATATTCCAACTGTTCCACAGAATACACCTGTTCCAAGAAATAT
TCCAACTGTTCCACAGAATACACCTGTTCCAAGAAATGTACCAATTGTTC
CGCAGAATAGACCTGCTCCGAGAAATATTCAAACTGTTCTGCAGAATACA
GCTTCTATTCCGAGAAATATTCCAACTGTTCCACAGAATACACCTGTTCC
GAGAAATATACAAACTGCTCCACAGAATACACCTGTTCCGAGAAATATTC
CAACTGTTCCGCAAAGTACACCTTTTTCAAGAAATATTCCAACTGTTCTG
CAAAGTACACCTTTTTCAAGAAGTATTCCAACTGTTCTGCAAAGTACACT
TTTTTCAAGAAGTATTTCAACTGTTCCGCAAAGTACACCTTTTTCAAGAA
GTATACCAATAGTTCCGCAAAATACACCTACTGTTCCAAAGATTATTCCA
TTTATCACGAAAAGTACGACATCTCCCAAATTGATAGAATCCGTcccaaa
aaat
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:3216812..3219899 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1492-1686:2894 |
| Aaloc | 1243-1488:2648 |
| Aaloc | 1159-1227:2579 |
| Aaloc | 1117-1158:2534 |
| Aaloc | 1057-1113:2477 |
| Aaloc | 1036-1056:2363 |
| Aaloc | 574-1035:1898 |
| Aaloc | 163-570:1448 |
| Aaloc | 58-162:1340 |
| Aaloc | 1-54:1 |
|
