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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000112_pilon:440110..445557- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015793 ID=XLOC_015793|Name=XLOC_015793|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5448bp|location=Sequence derived from alignment at sc0000112_pilon:440110..445557- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACACTCAAGAATTAGAGTGTTTATACAAAGGTTTCTCCTTGGGGCG
CAGCTTAGGCGAGGGTGCTAACGGCAAAGTGAGACTGGCAACATATGCCA
AGTTGAACGTTCCGGGCGACGCCCTCGCTGCAAAGTTGCGCGTCAAGGGT
ACCAACAAAGTAAGTTTAAATCTTTTCATACAGTTTTTCTAATAAATGAT
TTTGCGTTACTTGCAGAATTAAATTCTTACCAAGTAAGAATTTTTTAAGA
TTTTTACTCCTCTTAAAAATATTTTTATTGACTATTTATTATTTTACAGA
TTATTTATTTGTGCTGTAATTAGAAAAAAACATCATTAGCGTGAGGATCT
TTAGTTTCTATGGATAACTTACTTCGTCTTTTTTTAAGGTGGCTATTAAG
ATAATGCCCAAACGAAACGAAGCCGAGATTTCAAACGAATTCAAGGCAAT
GAGAAGAGCTAAAGGCTCTGCAAATATTGTAAGTATAGCCTTTATATTAC
ATATTATCATTTTTTTATGTTTTGAAGGTTAAGCTTCAGTACGTTTATCA
TAATGTTTCTGTAGTGGAAACCACAATCATACACTAAATATTTGAGATAA
AGGGGAGTTCCCGGTGTAATTTTGAACACCACGATTGATTTTTAAGCGCA
TTAGTTTTAACTCTGAGTTTTAACATGAGACTTAAGACTTACGACCTTAG
GATCTCAGGATTTAAAAGCTCAAATTTGCTCGAATGAGGCTTGGAATATA
GCCTAGAAGCCACCAAACCCCTCTAAAATCGAAATATTCAATGGAAGAAA
GTGGAAGTGCTAAAATAGCAATTCTCGCCCGAACTTTAATTTCTGAAAAA
CGTTAAAATACACTAAAATCTCAATATATTTCGAGGGTGATTGCAGGTTG
GGGTTTACTTATGCAACGGATATACACGTTTTTTTATAAGAACAAACTAT
ATAAGAACGGCTTCGATGGCCAAATTATTAAGAAAAAGTTAAAAACATTT
TAAGGCTTCGTGGGCTCGCTCTAAAAAGCTTGATTTCTTAGGAAATTGCA
CAAAAATACTCACAAAATGGTGAAGCTAAGAACATCCTGAGAACATTTTT
AGGCTCAAAACTCAAAAAGTTAGGAGAATCCTTAGGCTTCAAAAATTTTG
GATATTCTTATAAAAAAACGTGTACCTTTTTCACCACCATGAGTTCAAAA
TAACCAAAATAAAAATAGCTCTCTTTTTTGGAAATTTGGGAAGATGGCAA
TTTCTTTGAGATTAGTTATATAATGAAATTAATCCCCATTCGCAAATTTA
TGTGCCGAGTAGAGTCCATTTTTCGAAGCTCAGCAGGACCCTGTCGATCA
GCAAGGAGAGTAACTCCCATCATCATGGCGTTCTTATTTTACAAGCCTAG
TGAAATTTAAGCTACTGCACACGTGCTAGGCCTGGATAAATAAATAGGTT
ACCCTGGAAGCTGAGTCGAGCCTTTTTCATTAATGATAAATCTATACTTT
TATACATAGGTCGAAATTTACGGCAAATTCAATGGTATCGAAAATACCTA
TCTTATCATGGAATTCTGTCATGGTGGCGATTTGACCAATCATTTGGAAA
CCGTTTACAAAGATTCTCCATATCTTAGTGAATCCAAAGCTAAAGAATAC
TTCAGGAGTATTGCAACAGGAGTCAAATATTGCCATGATCATGGCATCGC
TCATCGGTGAGTTACTTTATAGTTAGCAGAGTTCATCAAATAACTTCCGT
CAGTACAAAAATTCAGCTGTACTCGCTCAAAAGTATTTTGTATTTTTTAC
GTAGTATAAGTGATTTAAACATAAAACGAATTCGCGCAGTAGTTACACCA
ATCGGTCCTATTAAAATACTTTATCCAATGGTATTTTGACTTACCTTGTC
TATCCAGACAATTGTGAGTTATAGGTATAGTTATATGAAATATGTTCTAA
GACTTCAAACAGCACAAGCCTACGATTACAGTAATTTTAAATATCATTTT
CTTTCCCGATTCTATTTTAGCGATCTCAAATTTGAGAACGTCTTAGTTGA
CCGATATGGAGTTGTAAAGCTTGCAGGTAAAAATCTTTAAAAACTTAACT
ACATTCTGTTCGAAATTTTGGTTATCTATCGATCCATCGAATGAGCTATT
CCATATTAAAAACACCTCCGTATGTTAAGAATTTCAAGCTTTCACAGAAT
TTTTGGCTTTTCCACGAATGAAAAATATGATCTGAAGGGTTAATTTTTTT
CTGGAATGGCCAATTACGTCGTTTACACAATTTTCACCACAAGCATTCAC
ATATTCCGTTTCTATACGTTTTAGATTTCGGATCGGCCGAATTTCCCGAT
CACTATCCCGATGGTCTCCTAGACACATTTATCGGCACACCTTCGTACAT
GGCCCCCGAAGTCGTACTCGGCTACCTCGATAAAGGCCAAGCGTATGATG
GTTACAAGGCAGATAGCTGGAGTGTGTAAGTTGTCCAAAGTTCGTCTTTT
CATAAGTACGCTAAGTTTATGCAAGTAAAACACTTATCATAGCACTCATT
CTGAAAAATAAAATGAGATTTTGTCTAGTATACCGACCGACTGCCTAACG
ATCTGCCCGTAGAACAACAAATTAAATTTGTCTCGCCTAAAAGAGGATTT
CAATATTGAAAATCCTGGAATACATATTACAAACTATTTTAAATTACACT
ATTGATATTACTGGACTTTCATATTCGATTTTGCTAAGCTTGTAGGTTTA
GAACGCCATGATTCTGGGAGAAACTCTCCTTGTTGACCGACAGGGTCCTG
CTATCTTATGGATGTTACTATATTGCATGGTATTATTTTTCTCCTTCCAG
TGGAATCATCCTGTTCAAATTGTTGACAGGCAAACAACCCTACGCACCGT
TGCCATGGCAACTACTCTACAATTTGATTCAAAAGAAGACTTTCAAACAA
CGTCTTCCAGCGGATGTAAACCTAACCCCAGGTAATTTGCGATTCGATTT
TAGTAGAGGCAGATCAGCTTATAAAATTTAAATATCCTGCCCTGGATTTG
CGTCTGCATTTAACCGATCGGAATCACCTGAAAAGGCCGGTAATTTGACC
ACTGTTATGCTATTTTAGTCAAATTCAAACTTTTTTCGAGTATTGCCGAT
AGAAAAAAAGAAGTAATTTTTATGAAAAAACCTAAATTTTCCTCTTCGTC
GGTAAAATCGCTTACATTTCCTAATTCGCCGTACCAGAATTAAAAAGCTT
CCGTCGTGCCTGCGTATAAACAAGAAAAGACAGCTCAAAGATTTCTTCTC
AATAGACGATAAGATTGACAAAGACTTTCAATCCAAGAGCAAATAATTTC
TGGAAGTTCCCATTGTCTTTAAAAAATCTTCTTTTTTTTATGACTTTTTT
TTTCTCAATTTTATTCACCGGCTAGTTGGTTGTCTGTACACAGACCCGAT
AACTACGGCTAATTTCAAAATTCATTGTCTTAGAGACGATAAACGTGAGA
TACACTCTGGTACAGAGTAGCTAGTTGGGAAGACATATCTAAATAACCAT
TATATTCTCTTACCTCTTGAATAGAATGTATCAACCTTCTTGGAAGACTT
TTAGACAGAGATGCGAAAAGCAGAGCATCACTTCAAGAAATATTGGAACA
TCCGTGGTTGAAGTTGGAAGAGGTAAAGAAGGTAATCTATGGGGGCGTAC
GGGCTTTGCGATTTCCGAAATACCGAATAATTTAGCCAAAATTTCCGAAA
TTTCATAAAAAAATACTTGCAATTCCGATATACCGATTTGTTGGGTATTT
TTCCTCGTTTTGACTAATTTTCCATCAAATTTGATTTTTCATGTATGAAT
TCAGAAAAAGGGTGACAAAAACTTTATAATACCGAAATTTAGAAGCAAAA
ATTCATGGATTTCTGATACCGAAACAATTTAAGAATTCCAAAATACCGAA
AGAATTTTCTCCGATTTCCGACATTCTGAAGAAAAAAGGTTCGATTTCCG
CAATTCCGAAATACCGTACGCCCCCACATCTATAAACTCTGATTTTCTAG
TGATACCTTGAAAAAATGTTCTCGTTAGTTTTCAAAAGCCGAGATGTTGA
GATGTTCAATTAATTACTACAGTTAGGTATCTTATTTTCCACTTAAGTAC
GAAAACAATTAATGAGCCTTGTAAGGAATCACTGTTTCAATTGCCGTAAC
TACTACCAAAATACTACTTTTTACTCAACACTGTAGAAGAGAATTTTACA
GGTGAAAACTCTCAAAGAATCTGATTATCCCTTTACATTTTTTTTATTAG
AACAAACATTATAAGAACATAAGACTTCGATGGCCAAAATGTTAAGAACA
AGTTAAGAACATTTTAAGGCTTCGTGGACTCTAAAAAACTAAATTTCTTA
GGAGAATGGACAAAAATACTAAAAAATAGCGAAAATAAGAACATGATAAG
AACGTTTTTAGGCTTAAAACTCAGCCTCACTTACAAGGATTTTATTGTTT
TGTTTTTCATACCTCACAATTTTTACACAACTTCAAATTAGAAAAAACTT
CATTTTTTAGGTCGATGAGAAAAAGAAAAATGTTCCAGTAAAGTTGATGG
ATGAAAAAAGGCCCTTGCAGGTAAGTAAAGTTAACTTTTATTCATTTTTT
ACACATTTTTTTTTACACATTTTACCCCAATTTTCGACTCAAGGCTGGAC
TTGCCAAGGATTTATATTCGCCACAAAAAAACCTCGCCTCACTTTGCCTA
TTATTATTTGTTAAAGTGCTTGAATTTACTTTTACATTTCAGGTCCAAAA
GCAATCGCAAGACGTTCGGGCAAAAAACGGAAATAACGCATTAAATACTC
TAATTGTCGTCAAAGGAAAAATGTAAGAAGGAACATATTTATTTGGACTC
CGATTCTGCACTAGATATTTTTTTCCCAGGAAAATCACGTGATATACTTT
TAACCAATAAAATTTGATAATTTCGAGAGGAAAGTGAACACTAAAACACT
TTCAAAACCAATGAGATATATAGGGCTAAAAAGGAATTCTCGACCACTCC
TAGGCAAGGGGAAGTCAATAATATTTGCGCTGAAGTTCGGATAACAGATT
GATTCTAAGTTTTTCTTTGTTTTTCTTGCGTGGCATGTTTTTAAAAATTT
GTTGGTAATGTTACTTTTTATCTACAGTGGAATTCGTGTGAAAACCACGC
GGGCCAAGAAAACTTATGTTTGAAGCCTACATAGGATATTCGGTTCCAGC
TCTCGGCTATATTAATACAGGTGGTTCTGAAATAGCATGAAAGCAATTTA
AGGATTATTGACATACTAGATGAGGCAATTAAATGAAACTCGTTCTTTTC
ATTCTCATTTTAGCGTCCACAGAGATGAGAGAAAACCATTCAGACGAGCA
TTCTATCCTAATGGCCATCATTTCACTCCACAAGAATGGTGGGAATGA Coding sequence (CDS) from alignment at sc0000112_pilon:440110..445557- >XLOC_015793 ID=XLOC_015793|Name=XLOC_015793|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2232bp|location=Sequence derived from alignment at sc0000112_pilon:440110..445557- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACACTCAAGAATTAGAGTGTTTATACAAAGGTTTCTCCTTGGGGCG
CAGCTTAGGCGAGGGTGCTAACGGCAAAGTGAGACTGGCAACATATGCCA
AGTTGAACGTTCCGGGCGACGCCCTCGCTGCAAAGTTGCGCGTCAAGGGT
ACCAACAAAATGAACACTCAAGAATTAGAGTGTTTATACAAAGGTTTCTC
CTTGGGGCGCAGCTTAGGCGAGGGTGCTAACGGCAAAGTGAGACTGGCAA
CATATGCCAAGTTGAACGTTCCGGGCGACGCCCTCGCTGCAAAGTTGCGC
GTCAAGGGTACCAACAAAGTGGCTATTAAGATAATGCCCAAACGAAACGA
AGCCGAGATTTCAAACGAATTCAAGGCAATGAGAAGAGCTAAAGGCTCTG
CAAATATTGTGGCTATTAAGATAATGCCCAAACGAAACGAAGCCGAGATT
TCAAACGAATTCAAGGCAATGAGAAGAGCTAAAGGCTCTGCAAATATTGT
CGAAATTTACGGCAAATTCAATGGTATCGAAAATACCTATCTTATCATGG
AATTCTGTCATGGTGGCGATTTGACCAATCATTTGGAAACCGTTTACAAA
GATTCTCCATATCTTAGTGAATCCAAAGCTAAAGAATACTTCAGGAGTAT
TGCAACAGGAGTCAAATATTGCCATGATCATGGCATCGCTCATCGGTCGA
AATTTACGGCAAATTCAATGGTATCGAAAATACCTATCTTATCATGGAAT
TCTGTCATGGTGGCGATTTGACCAATCATTTGGAAACCGTTTACAAAGAT
TCTCCATATCTTAGTGAATCCAAAGCTAAAGAATACTTCAGGAGTATTGC
AACAGGAGTCAAATATTGCCATGATCATGGCATCGCTCATCGCGATCTCA
AATTTGAGAACGTCTTAGTTGACCGATATGGAGTTGTAAAGCTTGCAGCG
ATCTCAAATTTGAGAACGTCTTAGTTGACCGATATGGAGTTGTAAAGCTT
GCAGATTTCGGATCGGCCGAATTTCCCGATCACTATCCCGATGGTCTCCT
AGACACATTTATCGGCACACCTTCGTACATGGCCCCCGAAGTCGTACTCG
GCTACCTCGATAAAGGCCAAGCGTATGATGGTTACAAGGCAGATAGCTGG
AGTGTATTTCGGATCGGCCGAATTTCCCGATCACTATCCCGATGGTCTCC
TAGACACATTTATCGGCACACCTTCGTACATGGCCCCCGAAGTCGTACTC
GGCTACCTCGATAAAGGCCAAGCGTATGATGGTTACAAGGCAGATAGCTG
GAGTGTTGGAATCATCCTGTTCAAATTGTTGACAGGCAAACAACCCTACG
CACCGTTGCCATGGCAACTACTCTACAATTTGATTCAAAAGAAGACTTTC
AAACAACGTCTTCCAGCGGATGTAAACCTAACCCCAGTGGAATCATCCTG
TTCAAATTGTTGACAGGCAAACAACCCTACGCACCGTTGCCATGGCAACT
ACTCTACAATTTGATTCAAAAGAAGACTTTCAAACAACGTCTTCCAGCGG
ATGTAAACCTAACCCCAGAATGTATCAACCTTCTTGGAAGACTTTTAGAC
AGAGATGCGAAAAGCAGAGCATCACTTCAAGAAATATTGGAACATCCGTG
GTTGAAGTTGGAAGAGGTAAAGAAGAATGTATCAACCTTCTTGGAAGACT
TTTAGACAGAGATGCGAAAAGCAGAGCATCACTTCAAGAAATATTGGAAC
ATCCGTGGTTGAAGTTGGAAGAGGTAAAGAAGGTCGATGAGAAAAAGAAA
AATGTTCCAGTAAAGTTGATGGATGAAAAAAGGCCCTTGCAGGTCGATGA
GAAAAAGAAAAATGTTCCAGTAAAGTTGATGGATGAAAAAAGGCCCTTGC
AGGTCCAAAAGCAATCGCAAGACGTTCGGGCAAAAAACGGAAATAACGCA
TTAAATACTCTAATTGTCGTCAAAGGAAAAATGTCCAAAAGCAATCGCAA
GACGTTCGGGCAAAAAACGGAAATAACGCATTAAATACTCTAATTGTCGT
CAAAGGAAAAATCGTCCACAGAGATGAGAGAAAACCATTCAGACGAGCAT
TCTATCCTAATGGCCATCATTTCACTCCACAAGAATGGTGGGAATGACGT
CCACAGAGATGAGAGAAAACCATTCAGACGAGCATTCTATCCTAATGGCC
ATCATTTCACTCCACAAGAATGGTGGGAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000112_pilon | genome | sc0000112_pilon:440110..445557 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1033-1116:85 |
| Aaloc | 952-1029:657 |
| Aaloc | 892-951:889 |
| Aaloc | 787-891:1873 |
| Aaloc | 655-783:2598 |
| Aaloc | 505-651:3123 |
| Aaloc | 448-501:3428 |
| Aaloc | 250-444:3940 |
| Aaloc | 160-249:5061 |
| Aaloc | 1-159:5449 |
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