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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000159_pilon:642693..649659- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015569 ID=XLOC_015569|Name=XLOC_015569|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6967bp|location=Sequence derived from alignment at sc0000159_pilon:642693..649659- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTTCAACGAATGGCAGTCTTCAATCACACTTCCGCTATCGCGCGTT
AAAGAAATGTTTGGGGGACGTTTCGAAACAGAATTATAGTTGCGTCCAAA
GAAATACCAGGTAAATAAAACAGTTATAGACACCCCCTTCTCACAAACTT
TTTCAGCCAGTGGGGTAAGATTAATGGACTGAAACTCGAAGGGGATCGAT
ATTCCAAATGTTTGGCAATTTTAACCAAAAATTATCCGTTTGAAAAAAAA
ATCAGGCCCGACCCCTCCAGGAAGGGATGTTCTTTGGACTTTTCAATCAA
TAATTATAATGACGAATATGTATGTTTATTAATTAAATGCAAAACTGGCT
TGTAAATTTTCAAACAAAAGCTACGAGAAATCTATCCTCGAATATAACAC
CCCTGTCTCAGTGCCCCGGTACAACTTTTTCCCTCAGTGGGGATGAAAAC
TTCTATCAAAATGCCAATGGGGATAGAAAATCTATTGTTTCCAGCTCGAA
AATTCCAGTGGGGATGGTTTTGGAGTGCATTTTTTACATTCAGTTTTCAA
TGGGGATAAAATCATAGAGCAATTTCGTAGTGGGGTTGAAATTGTAGGTT
ATTTTTTTCCAACGGGGACGATTTTTTGGCCTATTTTTCCACCGGGGTGG
GGGTCCACCGGGTCTGTGACACAGGGGTGTAATATAGAAAAAAATATACT
TTGACTGTCAAAATATTTGTCAAATCAAATAGCATTACGAGTCAAAAAAT
TTCTAATTTCTCAAAAATTCTAATTTAAATTCTTCTCGAGGACTACATTT
AGCGAAAACCACCAAAAATTTGAAATTTAATCCACTTAAGGTAGGTTTAC
AAGATGACTTTTATGACCAAATTAACCAAATAAAGTAAGGAGATGGTGAG
AAAGTGTTGGTCGATTTAAAAAAAAATTTGATCTAAACTTTCTAAAAAAA
CTTTTACGCTTTCACATCTAAAGTCTAAACAATATAATTTCAAAAACCTA
TTTATAAAATCTAGCCATAAAAACTCTAAAGTCCCTACGTCTTATCTAAA
TCAAGTAATCTTTTAATATCTCATATCTCATGATCAACAATTATCTTCCT
TTTTGAACACGTACACTATTTGTCGAATTATGGGGGCATATATAATAATG
TCTTTAATCGAAATCTTTGTCATCGCTACACGTTTCTGCATAATCCTGGG
TGATGGGATATCATATACCTTCTAAACTGATAAAGTAAGCCTTCCTCACC
ATCAGCTAGTCTAAATAAAATAGAACGAGATAAAATCAATTAAACATATT
AAAATTATATTATATATATTAAGAAATTAAGATAGAATCTGGATATAAGA
CCACAGGGAGGCACTTAGGCGAAACTGGTTACAGTGACGTGCCGTTGGTC
AGGGTCCCTTTTTAGGAAGTGTGGAAATATCTGACAGGGTCTAAAATTGA
CTAATTCTTAAGACTTGAAAGGGTCGACTATTTTTGTAACTTTTCAGAGT
GAGAATGGAAATTTTTTGGATATTTTCGTCTTGAAGGGTCCAAAATTGAC
CAAGCAACAAACACTCAAATGGTATACTTTTCAAACTCCAGTGGCAGGTC
CCCGTCGGTACCCTCCGGGAAATGAGATTGATAGATATTCTTCGTATTCC
ATGGATATATCTAAACCTCTGAGAGATTTTTTTTCAGTAAAGATTTTCCG
GAGATTTTCCTCAAAAGTTTAAAAGCATTAAAAGCACTTTTTAAAAACCC
CTCTTTCTAAAGCATACACAAAACGTTCTATAAGAACACTTTATGAACGC
CTTCAAAAATCCCCTATCTGGAAGCATTCGGAAAACGTTCCAAATGAACA
CTTTACGAACGCTTTTAAAGATCTCCTAACTAAAGCATTCTGAAAGTGTT
TTTAACGAACACTTTAAGAACGCTTTTAGAGATCTCCTTTCGGAAGCATT
CTGAAAGCGTTCTGGGACGAACACTTTAGAAACGCTTTTTTATATTAAGC
TTCAAAAGTGTTCGAAAAGCGTTCATTTCGAACACTTTAGGAACGCTTTT
GAAGATGTTCTTTCTAAAGCATTCTGAAAGCGTTCTTTACGAACACTTTA
GGAACGCCTTTTAAAATATTTTTTAAAAGCATTCGAATAGCGTTCATTAC
GAACACTTTACGCACGCTTTTATCTGATCGCCTTAGAAAGCATTCCTTAA
GTGTTCGCAAAGAACGCTTTAGAAACGCATTTCGACAAAAATGCATCCAA
ATGTCCAAATAGAACGCTTTTCCTGATAGTAGTGATGTTTCTTTATGCCT
GGGGATTTGAATTACATTATTTTCAAGCTTCATGTTTAAAAAAAATAGCA
TAATATTTTGCAGTGAGAATTTACTTATCTGATTATTTTTCAGCGGGACA
AAAATTAAGAGTACAATTTTGCACTGGGGACGATATTTTAGCCAATTTTT
CCGCAGTGAAGAAGGGAGAACTGTTTGTTGATACGACTAGATTTTTTTAC
GTGTGTTGCTTAAGAGCCATTTTCTTAGGGATATGGACAACGTCAGGAAG
AAATTTCCTCAGAATTGCTTCATTTTCAAATATTTTGTTCAAAACCCATG
ATTGATGCAACCTGTCAAAATTTTGAATGTTTGAAAATTCATACCAGATA
CCTTATCGGGGAAAATTTTCGTCGGGGAAAATTTTCGTCGGTGAAAAATA
TTCGTCACTTGGCCAATATTTCGTCACTTTTCCCCGACGAAGTTTTCCCG
ATAAGGTAGTTGGAATTCGGTTTAGGACTTTCTTTTTTGGACCTACCCTC
AGGTAGTCCTTTAAATTAGCCCTTTACTTGACCGTTATTCGTCCGTCCGT
TCGTTCGTCTGTTGCCAGTTTTTCTCGGGGTCGGCTCATTAGTTTTTTCT
AATTTTTTGCACAATGATGGAAAATGGCAATGCCCAAAATGTGACGGAGC
CCGATTTTCGAAATAAAATATTTCCGGTCGCTTAGGGCTGGAAAAGTCCC
GGAAAAGGCGGTTTTTTGGGATTTTCTCGAGATTTTATCATTAGTTTTTT
CTGATTTTTTGTACATAGAGGTGCGTTAGTACTGCCGAAAAGATGTTGAA
AACCGTTTTCCGAAAAAAAAATTTCCGACCTGTAGAACCGGAAATCGCCG
TTTTTTCGTATTTCCGTGACACTTTCTCAACTTATTTGACCGTTTTTTTA
CAGAAAAAGGTTCGCTATGGTGATACCCAAAACTTTGCATAATTTAATTT
TCAATAAAATCATTTGTTCAATCCGGAACTCCTTAAAAATCGCCGGAACA
GCCGAAAACCGGCGTAAAACAGATATCTTCATTTTTTCTAGTTATACTTG
ACAGATTTTCATGATTTTTTGCACAATGATGCAAAATGGCAATACCGAAA
ATGTGACGGAGCCCGATTTTCGAAATAAAATATTTCCGGTCGCTTAGGGC
CGGAAATGTCCCGGAAAAGGCGGTTTTTTGGGATTTTTTAGATTTTATCG
TTAGTTTTTTCAGATTTTTTGCTCAAAGATCAGCGCGCATTCAACGCTGT
GAAAAGTAAGCATGACGAAAATCTAAGATCTTGGATTAAGTTTAAAGTTG
ATACTTTTACTCACGTCGTGGAAAGCATATCTCAAAAATATCATCGACGC
TTTTAAAAAAGAGTCAGTGATAGAGAATGATAACATAAAGATCTATGCAT
TATTTCGATTCCATTAAAGTATAATTAATAGTTTAGTGCAATTATTGTTA
TACATTTGGAATGATGTAGAGGATTTCTTTTGAAAGAAACACATTTCAAT
TAAACTTGGAGGTTTCTGGGGGAATTCGTCAATAGTAAGCACGTATACTG
ATACAATCTGCTAGACATTAATACGGCAATATCTGCTCTTCATCTTTGAT
TCTCTCTATAGTGATTAGATTGACACATCCGCGATAAAATTTCTATACTT
GGTCGTCCTGATACTCAGGGTACAACATGGAGGTCGGAGAATGCCCCGAA
TTTTGCCCCCCTGAGATGCCAAAAAGTGCAAATAAACGTGTCGTGAGTTT
TATATTGGTCAAACCTTCCTCACTTCTGTCCAGGATTTTAAACATATTTT
GAGCTCTTCATTATTCAATTAGGTTATGTAGCCAATATAGGCGAAAAAAG
ATGATGTGCGCATTATTACCCCCTGAAAAGTCAAAAAGTGCTTGCAACAA
TGCCACATCCTGGTTGAGTTTTGTATGATTTTTTACATTGGCCGCACTTC
TATGAGGTTTTTGAACTAGCTAAGTTAGGTAAGCAAAATTTGTGAAAAAT
AGGCAAAAGTTTTGAAGTTCAATATTATCCACACTTCTATGAGGTTTGTG
AGCATTCTTGAGCTCTCCAACCTGCTCCAACTAGCTTAGGTAAGCAAAAT
AGGCGAAATATAGCAAAAAATAGCATTTTTTACCCCCTGAAACGTTGAAA
ATTGCCAGTAATGACAACGTCACCTTAATTTTCTTAACGATTTCGATGAA
GTCCGACGTTTTCGATGTTTTTGTTAAATTTTTGAATATTTTAAAGCGTG
TAATTTGTTAATGAGAGGCTAAAAATAGGCAAAATGGCTACTTTTTACCC
GTTTTTCTCCTTGCGAGCCCCTGGAAAACATTTTTCGAAGCTTTTTGTTT
TACTACTTCTTTTGAGTATATTTACCAAGTTTCAAGACATTTCCATGGCT
AAGATAAAAAGATATGGACTGATGTTACTGACATAAAACGGCTTCTCAAT
AGTAATTCCTTACCCGAGCTCTTTTAGGACCCCCTAATTCAAAAGCCCCC
TTAAAACGCTATTTAACTCTTCATTCCATAAACTGGATGTTGAGCAGCAC
GAAAATCGTATAGAAATTTACTACCCCTCTAGGTTGGCGCTACCCGGCAC
TCAGGAGCTGGTCTAAAAACACATGGCTTGAAGCTGTAAGGAGATTCGCT
GCCATTGAGAATAGGGAATACTACTACATAATTCAAAAATAATTGGACAG
CAGGTTTTTTTCTGATACTCATAACTCTTTCTGTGTTTATTTTCATGACT
TCTTTTAAGCAAATTTTTTGTTCGTCTTGAAATTATCTTTCTTTTGATAT
ATAATACTTGTATATTTGAACAACTTTTTTTCGGGCCTATTTTCCGGACA
TGTCCGGTTTTAAACTGTCCGAAAAAGTGGTTTCCCCTGTCCGGATTGAT
GGGGCTTTTTTTGGTAACTCAGTATACCCTAAAAAACATTTGTGCCAATT
TTCAGCTTTCATTTTGATGGCAATTTTGTCCAGGTCTCAGGCTAATTCTA
CCTGACTACTAATTAACAATGCCCAAACATGGTCCGATTTTTGAGAAAAT
TTTTTTCCGGCCGAAAATGTCGGAAATCGCCGTTTTTCTGGATTTTCATT
GGGCTTTTTCTATATAATTTTTTTTTTTCCATTCAAAAACATTAATAGCA
ATGCCCACCATCAAACATGTTTTAATTTTCAATAAAATTGATTTTTGAAG
CCGGAACTATTGACTGACTGATTTTTTTTCATTTTTCTTCTCGCATTGCT
ATCTAACTTTCACGATCATCAGGTAGGTCTATTCAGCATCTTGCTTGTTC
TTTTTGATAGAATATGGAACTACTATTTGATACTTGGTGAAAATATCCTG
ATAACCATGGGCTGAAATCAAAAAAACAAAAATATAGCTTATTTTAAAGG
TCATTTTCTTGCAAGGCTCTCACTACGACATGTTGGTTTTTGGATTTTTG
TGTAGTCTTTAGTGGATATGTTTTTAGTAGTGAAGAAGTGAGTTATGATG
GCGGCTTAAAAATGACCTTTAGTGTAAATATCTCCATTCTTCCCCAGTCC
ATTTCAGCCAAGATCCTCAGTTGTGAGGTGTTTATTAGGTTGTTTGGACT
CTCCAGACAGACAGACATTTTGACAGTCGAAAAACTCCAAAGATTTCCAT
GTGGTCTAGCCTCGTTAGACCTGTAGAAGGCCGAGAAAATAGGCTTTTTT
TAGCTTGTGTTTTGCGTAGTCGATTGCCCGTAGCAACGGTAAACAATTAC
ATAGCGACAGATATTACAAACCACCGTACGAAATTGTACTGATTTTTTGA
ATGGCCACCCTGTGATTTGTGTTGTTTACTATGTCTGTGTTTTTCATGTA
ACTAAAGTAACGATTTGCAAATTTACGAATCATTTACATCTGTTCCTATT
TTATTTTAATTATAGTACTCGGGATGATATTCTCAATGGAATGAATTTGG
TGACCATGGAAAAAGTTGTTGCAACGGTTTGCGAAAGACAACCTGACCAA
GAATACACTGATAGTCAAAGAGAAAAGAAGATTATCCTTAACTATCTCTT
GTTGAGCAGGTGAGATGAGGTTTCTGCTTCAATTGATGGGTACACGCATC
ATAATATTTGAAAATTTGTTATTTTGATAAAATGTGCATTATTTGGTCCT
AAATTGCCTTTTACTAAAAAATATACCACAACAAGCTAATTAGAGAGGGT
GCTGAGAAAATTGACTTGAAACGCAACCGTTCCTCCATTACATATTATAA
ACACTTTGTAAGTTAAGGATTTTTTATTTTAAAACACAGAGATGAATATA
GATCATCATTAATGACGGAGACAATAGCGTCATCCTTCCAGCTGCGGATT
TCTTATACTATTTGGTATCTTTGTAACCCTTAGATAGATAGATTCTTGAG
GTTTGACCAATGAAGTAAAAGCCCGAAAGGCTAGAAGTGAATCTCCTACG
TAGGATTTGAAGCCATTATAGCCTACATAAGCTGCGCGGCCTTGAGCGCA
CTTTTTCTTGCCTCGGAAAGGTTAATGATTCGCTTCTAGCCCTTCGGGCT
TTTACTTTATTGGGTGTGACATTTTTGTGCTCTATATTCAATGATCAGTA
TTCCGAAATTCATATTTTTCTAGTTCAGGGGAACACGAAGACGGACCAGT
CCGAAATATTCCGAAAA Coding sequence (CDS) from alignment at sc0000159_pilon:642693..649659- >XLOC_015569 ID=XLOC_015569|Name=XLOC_015569|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=590bp|location=Sequence derived from alignment at sc0000159_pilon:642693..649659- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTTCAACGAATGGCAGTCTTCAATCACACTTCCGCTATCGCGCGTT
AAAGAAATGTTTGGGGGACGTTTCGAAACAGAATTATAGTTGCGTCCAAA
GAAATACCAGATGCTTTCAACGAATGGCAGTCTTCAATCACACTTCCGCT
ATCGCGCGTTAAAGAAATGTTTGGGGGACGTTTCGAAACAGAATTATAGT
TGCGTCCAAAGAAATACCAGTCGGGATGATATTCTCAATGGAATGAATTT
GGTGACCATGGAAAAAGTTGTTGCAACGGTTTGCGAAAGACAACCTGACC
AAGAATACACTGATAGTCAAAGAGAAAAGAAGATTATCCTTAACTATCTC
TTGTTGAGCAGGTGAGTCGGGATGATATTCTCAATGGAATGAATTTGGTG
ACCATGGAAAAAGTTGTTGCAACGGTTTGCGAAAGACAACCTGACCAAGA
ATACACTGATAGTCAAAGAGAAAAGAAGATTATCCTTAACTATCTCTTGT
TGAGCAGGTGAGGGGAACACGAAGACGGACCAGTCCGAAATATTCCGAAA
AGGGAACACGAAGACGGACCAGTCCGAAATATTCCGAAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000159_pilon | genome | sc0000159_pilon:642693..649659 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 256-294:40 |
| Aaloc | 151-255:709 |
| Aaloc | 112-150:749 |
| Aaloc | 1-108:6968 |
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