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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000124_pilon:155055..158540- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015545 ID=XLOC_015545|Name=XLOC_015545|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3486bp|location=Sequence derived from alignment at sc0000124_pilon:155055..158540- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAACTGATGAGTGCCCAAAGATAGAGAAAGCCTCTCAGAAGTTGCT
TGATTTGTCTTATGATGAGAGAGTGAAACATTTTGAGAAGGAAGCAATGA
GTTTGTATCAATTTTGTTTAAAGAAGGGCTATTCTGAAGGAGATATGCAA
ACTTGTGTCTCAAAGCTTTATGGCCCTTCAAAATCTACAACTGTTAAAGC
ATTGGAAGATTCACAACGTTCAGTCATTTTACTTGTATTATTGATTGGCT
TGGTTGGAGCTATTTACTCATCTCCTGAGGCAAACAACTTTGTTGCTGCT
CATTACAAGTTATTCACTATCAAGGTATTTTGGTTTAGGATTTTTTTGGC
ATCTTGATCATGAACAATAATATGAAGCCGATATTGATATTATATAAGTA
CCCTCTCTTTGATTTGCTTTGATTGCTCAAGTTTGTTAATAACTATTCTG
AAAAGTTAAAGGGATAATCAGATGGTTTGTAATATTTGGCATGTGGGATC
CTTCTACAATCAGTGCCATAACATATTGGCACTTTTGGCTAATTTACCAT
TTTTTGAAGTTCGAGCGAGAATGTCAATTTCAGGCCTTCGACTTGATTTC
ATCAATTATTTCGATCTGGGAGGGATTTATTGGTTTCTAGTCTATATTTC
AAGCCCTACTGGACCATTCTTAAGTCTAGCGTTAAAACTCAGAGTTAAAA
CTCTACCCTTCGAACCTACATTAGAGCACTTACAAATCTGTTGTGGTTTC
AAAACTTCCCGGTGAATTTCCCTTTTGTGCCAAGTATTTTGTCACTGATT
GTAGATTGTCCTGAGAAAAATCTCAAAATATTTTTACCTAACTATTTTCC
AAAGTCGAGATATTTTTAAGTTACAAGTTTTTGACTTTTAGAATGAAAAC
AATAGAATTTCAACGTAAGAACCGTGTAAGAACCCATTTTAAAAAATTTC
AAATTTTGATATCTCGATTTTGGAAAACTGTGTTGTAATCTAAATATCTC
AAACCATCTAACTATCCCTTTAAGATTCATAACATTTTTTAGTTTTCTCC
AAATTTCACCAATTTCAGTATGTTTTGCCTTATTGGAACTTTGGCCAACT
TTGGAATGAAGACTGTATTGTTTACAATAAATGGCTTCCTGAAGACAAGT
TCGAAATCAACGAAAAGACATGCAAGTATTGCACAAATATTGTCAAACTC
AACAATAATACACTAGACAAGTACAAGGATTTCAGTAAAAGCGAGATGTC
TAAACATTATTTGGCTTTCCAACAACCTGTTATTGTTGAGGATGCAACCA
AAGGATGGCCTTCAACGCAAATCAATATGGAAATACTTAGCAAGGTATAA
TAAATTTCAATTTCTATGCGAAGTTTTGGAGGTTGTATAGAGAGCTGATT
ATGGGGTAGAGTACGTTTCATTTCCAACGCAAAATTCCCACACGTTTTTT
CTCAATGAAAACAAACTATATAACAACAAAATGCTTTGAACAAAATATTT
AGATAAAGTTAAGAACAATTTTCAACAATGCACACTCATTTTCTAAGGAA
ATTGCACAAAAATACTGACAAAATGGTTGAATAACACTTTTAGGCTTGAA
ACCCAAAAAGTTCAGAATATCCAAAAGCTTTGAAAATTTTGGACGTTCTT
ATAAAAAAAATTACTCTTCCAGTAAGACTAGACATTTATTGTGTAGACTA
ATTATAGTCCTGCGTCTTTACTATCATAAATGCTTGCCACCTATCATTCA
AACAGAGAAGGTCGCTCTTATTTTAGAGATGGCAACTTTCTTATGCTCTT
CTTCATTTTAGTGTAAATAATAGAAGAATTGACTTTTTTAGGTTTCAACA
AATAAAGCTCTTATGCTGGCAATTTTGGGTAATTGGTGGTACCTATACAA
CAAATTTTGGTTAAAATGGGGTTATCTCAAAGTGAATACAACCTTCTGGA
CTAACTTCTTTATTTTATTTTACTTTCAGTTATACCAAACACATCCCCTC
CTTTCACACTCAATGGGAAGTTGTGTTTATGAAACAACCGTGACTCAAAC
CTCAAATTTTTATGATTTCATTACTGCTTATGTGGATAAAACATTACAAG
ACAATTGGCATATTAGATGGTTGGTAATTTAGTTTTCCTTTTTTGAATGT
GCAGATTTTACTGTACCTTATAGTGTCAGCCTTACCGTATTTTGTTTTGA
TAACATGAAACCTTATTATTTTAAGAAATATACAAAAAATTCCTTCGTTT
TTATCTGGACCTTATCTTCTTCTATGTTTTAGAAATCTAAAAGAGATTTT
GGTTTTGTGTTTTCATGATGTCACGCAATTCACAATCTTAATGAAGTTAA
CTTTATTTTCTCAGGGAGAATTGTGATACAAAATCAGCAAAGATCATTCG
TAAATACTACTCAAGGCTTTATTTCATCCCAGACAGTGTACAATCAAACC
CGACTAATACAATCATTGCTGCTAGAGGTGCAAGTCCTGAAAAACACAAG
GTATAATTTGATGGAAATTGTTCTCAATACTTTAACTTTAACCTTCTGGT
GATGTTGCCTAAAAGATAACTTCCTGGGGTTTCTGATTTTGTCACTTCAT
GGTTGCTATCTTGAATTTTCACCGATATATATAGGAAATGGTAATAAAAG
GCAGTTATTCGGTGAATGTCTTAACTACTAAACTAAACTATACTAAACTA
GTAAACATTATTTATTTTGTCTCTTCAAAAAGAGGGGTAAGTTATTAATC
CTCGACGACCATCTGGAGTGCTCAAAGCCACTTTTCCTGGACAGAAAAAA
CACTACCTTCCTGATTTCCATGCTTATGTATTTTCAGTTTATCGTTGAAT
CAAGCGAAGGTCGATGGTTGACTGTTGTTTCTGGTTCAATGAAGGTGTAT
TTGAACCCAACTTACCCACAGTGTAAACATGATTATGGTTGTGATACTAC
TGTCTTTGAACTCAATGCTGGTCAAGCAGGTATTTTCCTTATTTATTTCA
CAATAGTGCCTGATTGGATATCAGGCAGCAAAAACAGGGGAAATAGAATT
AAGAGGTGGTTACCCGGTGAATTTCATGGCAGATTTTGCTATTTTCTGGT
ATTTTCCGGTATTTGCCAGTATATTTATTTAACCTTTTTTACATGAGACA
TCAGTTATGTATCTTTCAGGGTCATTTCCGGAGTACTCAAAGCCAATTTT
CTCGATCAGAAAACATGCCTCCTTTCTTATTCGGAAAATCTAGCTTTTCG
GGAGGTTTATATTTCTCCGCTAGGGAAATATTTTCTGTTAAGGCAAATAC
TGTTAAGTATTAGTAAGATTTTGATATAGTGTTGCCGATTGCCAAGCGAT
CAGATCTATACCTGAAAGTATAATTTCAAATTTCGTTTTAGTGTTTTACT
ATCCAAACGTATGGGAAATCGATTACGAAATAATAAGCAAAGATGAAACA
CTAGCTGTCTCCACATCACTTGTTTGGGACCAGTAA Coding sequence (CDS) from alignment at sc0000124_pilon:155055..158540- >XLOC_015545 ID=XLOC_015545|Name=XLOC_015545|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2226bp|location=Sequence derived from alignment at sc0000124_pilon:155055..158540- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAACTGATGAGTGCCCAAAGATAGAGAAAGCCTCTCAGAAGTTGCT
TGATTTGTCTTATGATGAGAGAGTGAAACATTTTGAGAAGGAAGCAATGA
GTTTGTATCAATTTTGTTTAAAGAAGGGCTATTCTGAAGGAGATATGCAA
ACTTGTGTCTCAAAGCTTTATGGCCCTTCAAAATCTACAACTGTTAAAGC
ATTGGAAGATTCACAACGTTCAGTCATTTTACTTGTATTATTGATTGGCT
TGGTTGGAGCTATTTACTCATCTCCTGAGGCAAACAACTTTGTTGCTGCT
CATTACAAGTTATTCACTATCAAGATGGAAACTGATGAGTGCCCAAAGAT
AGAGAAAGCCTCTCAGAAGTTGCTTGATTTGTCTTATGATGAGAGAGTGA
AACATTTTGAGAAGGAAGCAATGAGTTTGTATCAATTTTGTTTAAAGAAG
GGCTATTCTGAAGGAGATATGCAAACTTGTGTCTCAAAGCTTTATGGCCC
TTCAAAATCTACAACTGTTAAAGCATTGGAAGATTCACAACGTTCAGTCA
TTTTACTTGTATTATTGATTGGCTTGGTTGGAGCTATTTACTCATCTCCT
GAGGCAAACAACTTTGTTGCTGCTCATTACAAGTTATTCACTATCAAGTA
TGTTTTGCCTTATTGGAACTTTGGCCAACTTTGGAATGAAGACTGTATTG
TTTACAATAAATGGCTTCCTGAAGACAAGTTCGAAATCAACGAAAAGACA
TGCAAGTATTGCACAAATATTGTCAAACTCAACAATAATACACTAGACAA
GTACAAGGATTTCAGTAAAAGCGAGATGTCTAAACATTATTTGGCTTTCC
AACAACCTGTTATTGTTGAGGATGCAACCAAAGGATGGCCTTCAACGCAA
ATCAATATGGAAATACTTAGCAAGTATGTTTTGCCTTATTGGAACTTTGG
CCAACTTTGGAATGAAGACTGTATTGTTTACAATAAATGGCTTCCTGAAG
ACAAGTTCGAAATCAACGAAAAGACATGCAAGTATTGCACAAATATTGTC
AAACTCAACAATAATACACTAGACAAGTACAAGGATTTCAGTAAAAGCGA
GATGTCTAAACATTATTTGGCTTTCCAACAACCTGTTATTGTTGAGGATG
CAACCAAAGGATGGCCTTCAACGCAAATCAATATGGAAATACTTAGCAAG
TTATACCAAACACATCCCCTCCTTTCACACTCAATGGGAAGTTGTGTTTA
TGAAACAACCGTGACTCAAACCTCAAATTTTTATGATTTCATTACTGCTT
ATGTGGATAAAACATTACAAGACAATTGGCATATTAGATGTTATACCAAA
CACATCCCCTCCTTTCACACTCAATGGGAAGTTGTGTTTATGAAACAACC
GTGACTCAAACCTCAAATTTTTATGATTTCATTACTGCTTATGTGGATAA
AACATTACAAGACAATTGGCATATTAGATGGGAGAATTGTGATACAAAAT
CAGCAAAGATCATTCGTAAATACTACTCAAGGCTTTATTTCATCCCAGAC
AGTGTACAATCAAACCCGACTAATACAATCATTGCTGCTAGAGGTGCAAG
TCCTGAAAAACACAAGGGAGAATTGTGATACAAAATCAGCAAAGATCATT
CGTAAATACTACTCAAGGCTTTATTTCATCCCAGACAGTGTACAATCAAA
CCCGACTAATACAATCATTGCTGCTAGAGGTGCAAGTCCTGAAAAACACA
AGTTTATCGTTGAATCAAGCGAAGGTCGATGGTTGACTGTTGTTTCTGGT
TCAATGAAGGTGTATTTGAACCCAACTTACCCACAGTGTAAACATGATTA
TGGTTGTGATACTACTGTCTTTGAACTCAATGCTGGTCAAGCAGTTTATC
GTTGAATCAAGCGAAGGTCGATGGTTGACTGTTGTTTCTGGTTCAATGAA
GGTGTATTTGAACCCAACTTACCCACAGTGTAAACATGATTATGGTTGTG
ATACTACTGTCTTTGAACTCAATGCTGGTCAAGCAGTGTTTTACTATCCA
AACGTATGGGAAATCGATTACGAAATAATAAGCAAAGATGAAACACTAGC
TGTCTCCACATCACTTGTTTGGGACCAGTAATGTTTTACTATCCAAACGT
ATGGGAAATCGATTACGAAATAATAAGCAAAGATGAAACACTAGCTGTCT
CCACATCACTTGTTTGGGACCAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000124_pilon | genome | sc0000124_pilon:155055..158540 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1021-1113:94 |
| Aaloc | 877-1017:650 |
| Aaloc | 742-876:1122 |
| Aaloc | 601-738:1508 |
| Aaloc | 325-600:2419 |
| Aaloc | 1-324:3487 |
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