XLOC_015543 (mRNA) -

Overview
NameXLOC_015543
Unique NameXLOC_015543
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000279_pilon:35789..37453+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015543 ID=XLOC_015543|Name=XLOC_015543|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1665bp|location=Sequence derived from alignment at sc0000279_pilon:35789..37453+ (Clytia hemisphaerica_ch_hm2_pilon)
ttagaaccacacccttccactgatacgcttcgcacccaaaacgcgttaga acctagacccttcactgatacgcttcgcacccaaaacaccttagaaccac acccttccactgatacgcttcacacccaaaacgcgttaggacctagaccc ttcactgatacgcttcgcacccaaaacgcgttagaaccacacccttccac tgatacgcttcgcacccaaaacgcgttaggacctagacccttcactgata cgcttcgcacccaaaacatcttagaaccacacccttccactgatacgctt cgcacccaaaacgcgttagaacctagacccttcactgatacgtttcgcac ccaaaacaccatagaaccacacccttccactgatacgcttcgcacccaaa acgcgttagaaccacacccttccactgatacgcttcgcacccaaaacgcg ttaggaactagacccttcactgatacgcttcgcacccAaaacatcttaga accacacccttccactgatacgcttcgcacccaaaatgCGTTAGAACCTa tacccttcactgatacgcgttgcacccaaaacatcttagaaccacaccct tccactgacacgcttcgcacccaaaacaccatagaaccacacccttccac tgatatgcttcgcacccAaaacaccttagaaccacacccttccactgata cgcttcgcacccaaaacgcgttagaacctagacccttcactgatacgctt tgcacccAaaacaccatagaaccacacccttccactgatacgcttcgcac ccaaaacaccttagaaccacacccttccactgatacgcttcgcacccaaa acgcgttagaacctagacccttcactgatacgcttcgcacccaaaacacc atagaaccacacccttccactgatacgcttcgcacccaaaacaccttaga accacacccttccactgatacgcttcgcacccaaaacgcgttagaaccta gacccttcactgatacgcttcgcacccaaaacaccataaaaccacaccct tccactgatacgcttcacacccaaaacgcattagaacctagacccttcac tgatacgcttcgcacccaagaCACcgtagaaccacacccttccactgatg cgcttcgcacccaaaacactttagaaccacacccttccactgatacgctt cgcacccaaaacaccttagaaccacacccttccactgttacgcttcgcac ccaaaacgcgttagaacctagacccttcactgatacgcgtCGCACCCAAA Ttatcttagaaccacacccttccactgatacgcttcgcacccaaaacacc ttcgaaccacacccttccactgatatgcttcgcacccaaaacgggttaga acctagacccttcactgatacgcttcacaTCCAAAACGCCTTAAAACCat acccttccactgatacgtcTCACACCCAAAACGCAATAGAAGCACACTCT TCCACTGAGTGTATCGCCTAGCGagggaaaagaaaagttttcGATGTGAA GGTTCTAACCATTTCTCTAAAAGTTCAGTCTGTAAAGGACCATCAAATAA AACCTGGAATATGGATAGTATCAATACAGACTAATTATATATCCAATGGG AGGAAAGCTAGATAG

Coding sequence (CDS) from alignment at sc0000279_pilon:35789..37453+

>XLOC_015543 ID=XLOC_015543|Name=XLOC_015543|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=828bp|location=Sequence derived from alignment at sc0000279_pilon:35789..37453+ (Clytia hemisphaerica_ch_hm2_pilon)
ttagaaccacacccttccactgatacgcttcgcacccaaaacgcgttaga
acctagacccttcactgatacgcttcgcacccaaaacaccttagaaccac
acccttccactgatacgcttcacacccaaaacgcgttaggacctagaccc
ttcactgttagaaccacacccttccactgatacgcttcgcacccaaaacg
cgttagaacctagacccttcactgatacgcttcgcacccaaaacacctta
gaaccacacccttccactgatacgcttcacacccaaaacgcgttaggacc
tagacccttcactgatacgcttcgcacccaaaacgcgttaggacctagac
ccttcactgatacgcttcgcacccaaaacatcttagaaccacacccttcc
actgatacgcttcgcacccaaaacgcgttagaacctagacccttcactga
tacgtttcgcacccaaaacaccatagaaccacacccttccactatacgct
tcgcacccaaaacgcgttaggacctagacccttcactgatacgcttcgca
cccaaaacatcttagaaccacacccttccactgatacgcttcgcacccaa
aacgcgttagaacctagacccttcactgatacgtttcgcacccaaaacac
catagaaccacacccttccactGACCATCAAATAAAACCTGGAATATGGA
TAGTATCAATACAGACTAATTATATATCCAATGGGAGGAAAGCTAGATAG
GACCATCAAATAAAACCTGGAATATGGATAGTATCAATACAGACTAATTA
TATATCCAATGGGAGGAAAGCTAGATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_015543XLOC_015543-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000279_pilongenomesc0000279_pilon:35789..37453 +
Properties
Property NameValue
Aaloc337-414:1588
Aaloc160-336:205
Aaloc1-156:1