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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000333_pilon:51962..54964- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015527 ID=XLOC_015527|Name=XLOC_015527|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3003bp|location=Sequence derived from alignment at sc0000333_pilon:51962..54964- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGCAGCACGAAGAGCAGCAGCTCGCTTACACCGTCAGTTTTTAGA
TCGATGGGGCAGAATATTGTACGATGGGACCAAAATCGAAGTTATTCATT
TTTTACAAGCGTACGCATTGATTCCACCAAATAAAATATGCCACAACTGC
GGTAGACAGATGAATTTGAACGCTGATACTGTTTTAGATGGTTACCGATG
GTAAGATTCTTTATATTATGTTGCACCACCTCTTTTATAGAATAAGGAAA
ACTATAATTTTCTTTTGGAAACATTCGATGAGAGGGTATTAGTATTACGA
CATGATGGGCACGTGCCCTCTAATTTGGAATGAATAAAAAAGAGAAAAAA
CTTTTCCAAATTTTGCGACTCTTCTTACCGCGACTTTTTTGATAACGTTT
CCAAGAATTTTGACCAAATTTCACTCACAAAAAGTGTAGAAATCAAAAGA
TTTTTGGGATTTTTAAGATTGCTGAATGTAAGGAAAGTTTTAAGCGGTTT
TTAAATCTTTTTTGAATTGATTTCTAATATTTCTAGAGGACTTTCAGATT
TTTTTGGTATCTCTTAGAGATTTTAAGAGCTAATTGGGATTATTTTTAGA
AATTTTTGGTGTTTGCTAGGAATTTTTGAAATTTTTTGGGATTTTTTATT
CCTTCAGAAAACCTTTGTGATTATTTTTGGGATCTTTCAGGGATTTCGTT
AATCTTTTAGGTAATTTTGGGAACTGTTGGAATTTTTGAGATTTTTGCGT
AAAACATTTTTGCATTTTTAGGAAAGAATCAGAATCGGAACTTCGAGATC
TGAGTCCTAGACAAACCCATTTTTTTGTAAAAAAGGGAACCCTGAGACTG
AAGAGACCTAAATTGATAAAAAGTCACTAATAGAGAGACTCTAAATTCTA
AAGAGTTCTTCGAGTTTACCAACCTAGACTCCCATTTCTCCTAACACCCC
TGCCCCTGGGAACTATTTGTATTCAAGATATTCTTCTCATAGGAGATGTG
GTAGACCCTGCCGAACAAATGTTACAGTGAGAGACGGCACTATTTTCGAA
GGTTTTTCTGTCACGTTATCGAAAGCTTTCATGATGATTTATTACTGGTC
AAATAAAATCCAAATGAAGTATGTTAGAGAAATGACCAATTTGTCTAAAA
ACACAATTATCAAGATGTATCAAAAATTGAGACAGGTTTGCAGAAACGAT
TTGCAGCGAAATCCGATCAGGGTTGGTGGTGGAGGTCAAAACTTTGTAGT
TCAAGTGGATGAATCAATGATTCGTCATGGTCAAAGAGTAAGTATCATTT
TTTAGTAAATGATTTATCTTCAGAATACCAGCATACCATCTTCTTTACTT
TTCTTAACCTTCTTGCCCTGACCTTTCTAGCAGTACCAGTCTTTTTAAGA
TGCGGAAAAAATTGCAAATTGGCAGTTTGCATATATTTTAAGACTGCTCT
TTAAAGAAAAGTGCTGTACACTCTTTTTTTTATAAGAATACACTTTATAA
GAATGTCCATGATGAAAATGGCCAAAAAATTAAGAATAATGCTAAGAATA
TCACCATGATGGAATTTTGCTACTCAAGCTAAGAATGCAATTTTTAGACC
ATTTTCAATTATAAATTGTCAATTACCCCAAGTAAGGAAACTAAAAGTAA
ACTTACCTGATTTTCTTATCTATCTTAGTTAATAAGTTAAAACTCTGCTA
AATCGTTCAAAATACCCCAAAACGGGTATAGCATAGGTAAAGAATAGACC
CACTTTAGATTTAGTAAGCCAGCTGTAATTTCCCGTCCGTCATTTTCATC
ATTTTTCTTCTTCACTTTCAATTTCAAGATATTACTTTTATTACTTTTTT
TACATCTAAATGTGCGGACTGCCAATTTCATTGAAACAGATTACCACTAA
TTATTACTTTGTATAACTAGGGTGGCAGGGGAAGACGCGCAAATCCCGTA
TGGGTATTTGGACTCGCAGATACACAGTTTCAACCTGCCAAGGGTTACAT
GGAAGTAGTACCACGCCGTGACCGTGCTACTCTAACAGGAGCCATCAATA
GAGTGCTTTTGCCAAACACAGTCATTACTAGTGACGAATGGCGTGGCTAT
CTGAGGTTGCCACAATTTGTTCAAAATTGCATCAGGCATGATTCTGTCAA
TCATACGTACAATTTTGTCAATCCAGCAAATGGTGCCCACACACAAGTAG
GTCGCAGATTTGAATGTATTTTTTACTATTTACTTTTTATTATTTACAAA
AGATGACAAATAACAGATTGATTTTTTTGTGTTCTAAAGGCTGTCTTAAA
GTATCTCCCAAAACAAAATCGGCTGCATCTTTTTTATATGATTTGAATAA
AATTTTGTGCTCAATGAAAGGGTATTCATAAGTGAGAAGCTGAAAACTTC
ATCTTGACTGACTTCATCTTTTTCACAGTTACTAAACAAAGAGCGAAATT
TATCTTCTGAAATCGTAATTACCTAATTATTCAAAATGAAGCGCTTTTTG
ATGATTTTTCACCTATAGAATAAAGCAAATCGGCCCTCTATAAAATCTTT
TCAGAATATCGAATCCTATTGGAACAAATTTAAACTGGTCATCAAAGCAA
TGAAGGGCATAGAACTACAATATCTACAAAGTTACATGGATGAGTTCATG
TGGAGGTGAGAAAATATGTTATAAGAATTAGCATTTTAACATAGGTATTT
GATAACCTAATTTCAGGGCGTAAAATGAGGTAAAAAGTTAAAATTTTCAA
AAAAGTTGCGAAGCTATTTTGGCTCAGAATCCATAAGCAACTTTTGGCTT
GAAATCATGAAAATCCTTAGCAACTCCGGCCCTGAGCCGAAAATTGGAGT
CGCTTATAAAAAACAATGTGTAAGCTTTAAAAAGTCGAAATGAAAGGTTC
AATATATTATATTTTTAAATATGCTTATTTTAACAGAGATTGGAGAGGAT
TAGAAGAGCCACTAGAAAACATCATCAACTGCATCAACATTGACTATCCA
TAA Coding sequence (CDS) from alignment at sc0000333_pilon:51962..54964- >XLOC_015527 ID=XLOC_015527|Name=XLOC_015527|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1878bp|location=Sequence derived from alignment at sc0000333_pilon:51962..54964- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGCAGCACGAAGAGCAGCAGCTCGCTTACACCGTCAGTTTTTAGA
TCGATGGGGCAGAATATTGTACGATGGGACCAAAATCGAAGTTATTCATT
TTTTACAAGCGTACGCATTGATTCCACCAAATAAAATATGCCACAACTGC
GGTAGACAGATGAATTTGAACGCTGATACTGTTTTAGATGGTTACCGATG
ATGGCAGCAGCACGAAGAGCAGCAGCTCGCTTACACCGTCAGTTTTTAGA
TCGATGGGGCAGAATATTGTACGATGGGACCAAAATCGAAGTTATTCATT
TTTTACAAGCGTACGCATTGATTCCACCAAATAAAATATGCCACAACTGC
GGTAGACAGATGAATTTGAACGCTGATACTGTTTTAGATGGTTACCGATG
GAGATGTGGTAGACCCTGCCGAACAAATGTTACAGTGAGAGACGGCACTA
TTTTCGAAGGTTTTTCTGTCACGTTATCGAAAGCTTTCATGATGATTTAT
TACTGGTCAAATAAAATCCAAATGAAGTATGTTAGAGAAATGACCAATTT
GTCTAAAAACACAATTATCAAGATGTATCAAAAATTGAGACAGGTTTGCA
GAAACGATTTGCAGCGAAATCCGATCAGGGTTGGTGGTGGAGGTCAAAAC
TTTGTAGTTCAAGTGGATGAATCAATGATTCGTCATGGTCAAAGAGAGAT
GTGGTAGACCCTGCCGAACAAATGTTACAGTGAGAGACGGCACTATTTTC
GAAGGTTTTTCTGTCACGTTATCGAAAGCTTTCATGATGATTTATTACTG
GTCAAATAAAATCCAAATGAAGTATGTTAGAGAAATGACCAATTTGTCTA
AAAACACAATTATCAAGATGTATCAAAAATTGAGACAGGTTTGCAGAAAC
GATTTGCAGCGAAATCCGATCAGGGTTGGTGGTGGAGGTCAAAACTTTGT
AGTTCAAGTGGATGAATCAATGATTCGTCATGGTCAAAGAGGTGGCAGGG
GAAGACGCGCAAATCCCGTATGGGTATTTGGACTCGCAGATACACAGTTT
CAACCTGCCAAGGGTTACATGGAAGTAGTACCACGCCGTGACCGTGCTAC
TCTAACAGGAGCCATCAATAGAGTGCTTTTGCCAAACACAGTCATTACTA
GTGACGAATGGCGTGGCTATCTGAGGTTGCCACAATTTGTTCAAAATTGC
ATCAGGCATGATTCTGTCAATCATACGTACAATTTTGTCAATCCAGCAAA
TGGTGCCCACACACAAGGTGGCAGGGGAAGACGCGCAAATCCCGTATGGG
TATTTGGACTCGCAGATACACAGTTTCAACCTGCCAAGGGTTACATGGAA
GTAGTACCACGCCGTGACCGTGCTACTCTAACAGGAGCCATCAATAGAGT
GCTTTTGCCAAACACAGTCATTACTAGTGACGAATGGCGTGGCTATCTGA
GGTTGCCACAATTTGTTCAAAATTGCATCAGGCATGATTCTGTCAATCAT
ACGTACAATTTTGTCAATCCAGCAAATGGTGCCCACACACAAAATATCGA
ATCCTATTGGAACAAATTTAAACTGGTCATCAAAGCAATGAAGGGCATAG
AACTACAATATCTACAAAGTTACATGGATGAGTTCATGTGGAGAATATCG
AATCCTATTGGAACAAATTTAAACTGGTCATCAAAGCAATGAAGGGCATA
GAACTACAATATCTACAAAGTTACATGGATGAGTTCATGTGGAGAGATTG
GAGAGGATTAGAAGAGCCACTAGAAAACATCATCAACTGCATCAACATTG
ACTATCCATAAAGATTGGAGAGGATTAGAAGAGCCACTAGAAAACATCAT
CAACTGCATCAACATTGACTATCCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000333_pilon | genome | sc0000333_pilon:51962..54964 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 874-939:67 |
| Aaloc | 772-870:450 |
| Aaloc | 496-771:1084 |
| Aaloc | 202-495:2011 |
| Aaloc | 1-198:3004 |
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