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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000247_pilon:112275..115861+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015490 ID=XLOC_015490|Name=XLOC_015490|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3587bp|location=Sequence derived from alignment at sc0000247_pilon:112275..115861+ (Clytia hemisphaerica_ch_hm2_pilon)
AACGATGTCACTTTCACCGGAGCAATGAGTGGAGAAGTTTTTATTTGGAA
TTCTCATTCTTTATCACGTATCGTGAAAAATGTTCATTCCGGTCCTGTTT
TTACCATGTTCACAACTGTTAAAGATGGCCTCATCGTCACCGGTGGTAAA
GAAAAAGGGTATGACAAATATCTTGTAACATGAAAGTAATCTAATGTCAT
TGTTAATCAAAAGCGTTGAACTGAAGGATCATTTTATAGCCAAAGGTTCA
GGCAGGAGTCGCTTATTCTCTGGATTTCTTCTCTAAATCATAACCCTTCG
TGATTGCATACTTTACTTAAGCAGCATTAAGCAGAGTGGTGTCATGGGCT
ATTTTTCTTTCCTAACAATCTGTTGGGGTCTGAAGGATTGATAATAACCT
AAAGAACTCATGACAGACTAAAGAACCGATGCCAGGCTAAAGGACCGATT
ATAGGCTATTTCGACTTGACGATCTctttgttttttggacctaccccggt
ggaggtcctataaattaacctttgtccgttcgtctgttcgttcgttcgtt
cgtttgttattagctttcctcaagATTgactcgttagttttttctgattt
tttgcacaaagatgcataactataaaccctcgaatgtgacggagcccgac
tttcaaaaaaaaaattttttgggcaaatttgggccaaaaaacggctaaaa
aacgggttttttggactttgtgaaaaattagttcgttaattttttctgat
tttttgcatgaaagtagggtactatcgtaggtaaaagatggcttaagcga
atttttgcaaaaaaattttattggctcaaaaaacgcatgtttatctataa
gaatcactattcataagcatacatcaatgttcttagtcaaataactcaat
tttttgtatgagatagatgttttttttgctcacgaaggcttacttttaaa
gaatatatgtgtttagacatgttTTCATAGAAAAGCtagccaaattcgat
atttttttataagcacactatcaattacttaggtattagcttttctcgag
attggctcttttattctttatgattttttgcacaaagatgcataactata
aaccctcgaatgtgacggagctcgattcttggaaaaaaaaaatctggggt
aaatttcagctaaaaagagatgtttttttgctctcgaagtcttgaatatg
aaagaatagagcatgaaattttggtttctaaacgtgtttttttataagaa
acaaacgactaattttaatagatcgtcactatttgtgttctgaatgattg
tttaatggtcacacttatgtagatatcaattatatatgtgttaaatgcat
aaccaggtaggtccataaaagtatcacttgttcttttCAGTTCTGACGGT
AAAGATTGTACGCCAGTCAAGTTATGGGATCAAGAATTGAAACGATGTAA
ATCATTCCAAATCGGAAAACCAACTTCCATCAAATCTGTCTGTAGAAATA
CGAACAAGGTATGTCTTTCATTACACACTTAATCAACCTTTTAAGCATGG
GGAGgctgggttcgagtttaccaGGGAGGAATGCTGTCAAAATGTTTTGA
GTCATTGTATTGACATCCTTACAGACAAAATTATGAAGGTTCATTGAATG
AGCACTCGAAAAAACCAGGCGTTTCCAAATAATTCATACGAAATAAAGCA
TATTTTTATACCATCCTTCCTCTTTGGTTTCAGAATAAATATTTTCGGAC
TTTCCTTCTCATGTGTGGATGAAATATTTGAAGCATCCATGTTGTCTAAC
GGTTTACTTATGTTCTTAGGGATTGATTCTGGTTGGTACGATGGATAACG
AAATTTACGAAATCAACGAAAAGAGTGGCAACAGCAAAGTAAGCTTCTTT
ATTTCTCCTTGGATTCCATGAAGTATTCCTAAGTTAGGTGAAGTTTTTAA
AAAGGTCATCATGAATAAATTTGCCCTTTCGAGAGTTGATGGGGAGATAT
ATTATTGTTAGCTAAGTTTCCTAGGaaagggtttttttttaatgttcata
CGTTCTGTCAACGAATTTCACCTAACAATCCACATTCTGGATTCTTGACC
TTGAAAGACTGGATTCTCGGTGTTCGCGGTGTAGATGTGCTTTCTCATTC
TGCAATACAGTTATACTAAATCGGACCTGAAACAACACAGAAAAAAGCCA
GTATTCTCATAAGCCAGCCATTTGTCTTTATTCCACCAACAGGCGATTGT
TGAAGGACATGGAGACGGTGAGATGTGGGGCTTGAGTTCTCATCCTTCAC
AAGAAATTGCTGTCACTGCCAGTAATGACCAATCAGTCAGAGTATGGGAC
CTCGCTTCCAAGGTTGGTTCTCTCCAAATTCATTCTTTTAAGGGGCATCA
TTTAACagcattttaaacaaaagagaaaacGTTAGGAGCTTCGCGCCTCG
CGAGTATAAATTTTGAGAACTTCTATTGTTTATTCTGCATTCTTAGCATA
AAGACCTTTTTTGTATATCACGAAAAATAATACGTTTAAGACAAATTCAA
AACCCTTGTTCTGCCTATATGTATTAAAGAGTCTGGGGCGATTAAGTAGA
ATTTGCCTGTATACCAGTGCCTGAGGAATTTTTAAGCTAGTTTTGTTTGT
TCTATTAGTTTCGAAATATCCGTTCGGAGTATGAGATATGTACACCTCCT
TTTGCGAATACCTCATTAAGAAGGACTTTATTGCATATAAGTTTTATCGC
TAAAAGTTACAAACGGGAATTTCATgaaacaaattgaaattttagatttt
gtttCAATTCAATATTACACGGCAAACTTTGACACAAGAATTTAAAACCC
ATGGCATTCTTTCCTTTGTAGCATATGCTTCGTAAGGCAGACATGGGTTA
TCCAGTCAAATGTTGCTGCTACTCCCCCGATGGTGGTACAATTGCAGTTG
GACTCAATACGGGTGAACTTCAACTCCTTGACGCAGAATCGTTGAAAAGC
GTTGCTAAGAAACGAGATCGCAATAAACCAATAACTGTTGTCAGGTAACG
AGGCATTCGATTTCCTAAATCTTTCATTATTATTACTTCAGTAGATTCTC
TATTACCCAAACCTGTCTCCTCGACTTGAACTATTTGTCTACCCCTTTCT
CTTCAGCTAGCAAATCCTAATAAACCAGTCCCTGAATTTTGATAtcccca
taactcgaacaagattTCGTACCTCGGTCTATGGTGTTTAAGGTATCCAA
GATATTTAAGAACCCTTTTGAGATAGTAAATCAATTCTCAGCATCAGCTT
TGTAGAATATTCTCAAGGAATTGTTTGATATTAGATACGCTATTATTGTT
TCCACTTTATAGCAAAAATTAGTGCACTCCTCGAATAGTctccttaattt
ttttctcagtttttctggTGATGGCAAACTTATAGCGGTCGGTACTGAAG
ACAAATCCATCGATTTCTACTCCGTTAAACCAAACATCAAAAGAGTTGGC
TACTGTAAAAATATACCTAGCTATGTTTCCCAGCTCGATTTCTCAAGCGA
TGCCAAGTTTATCCAGGTAGGTGAAACAATTTCTTAA Coding sequence (CDS) from alignment at sc0000247_pilon:112275..115861+ >XLOC_015490 ID=XLOC_015490|Name=XLOC_015490|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1632bp|location=Sequence derived from alignment at sc0000247_pilon:112275..115861+ (Clytia hemisphaerica_ch_hm2_pilon)
AACGATGTCACTTTCACCGGAGCAATGAGTGGAGAAGTTTTTATTTGGAA
TTCTCATTCTTTATCACGTATCGTGAAAAATGTTCATTCCGGTCCTGTTT
TTACCATGTTCACAACTGTTAAAGATGGCCTCATCGTCACCGGTGGTAAA
GAAAAAGGAACGATGTCACTTTCACCGGAGCAATGAGTGGAGAAGTTTTT
ATTTGGAATTCTCATTCTTTATCACGTATCGTGAAAAATGTTCATTCCGG
TCCTGTTTTTACCATGTTCACAACTGTTAAAGATGGCCTCATCGTCACCG
GTGGTAAAGAAAAAGGTTCTGACGGTAAAGATTGTACGCCAGTCAAGTTA
TGGGATCAAGAATTGAAACGATGTAAATCATTCCAAATCGGAAAACCAAC
TTCCATCAAATCTGTCTGTAGAAATACGAACAAGTTCTGACGGTAAAGAT
TGTACGCCAGTCAAGTTATGGGATCAAGAATTGAAACGATGTAAATCATT
CCAAATCGGAAAACCAACTTCCATCAAATCTGTCTGTAGAAATACGAACA
AGGGATTGATTCTGGTTGGTACGATGGATAACGAAATTTACGAAATCAAC
GAAAAGAGTGGCAACAGCAAAGGATTGATTCTGGTTGGTACGATGGATAA
CGAAATTTACGAAATCAACGAAAAGAGTGGCAACAGCAAAGCGATTGTTG
AAGGACATGGAGACGGTGAGATGTGGGGCTTGAGTTCTCATCCTTCACAA
GAAATTGCTGTCACTGCCAGTAATGACCAATCAGTCAGAGTATGGGACCT
CGCTTCCAAGGCGATTGTTGAAGGACATGGAGACGGTGAGATGTGGGGCT
TGAGTTCTCATCCTTCACAAGAAATTGCTGTCACTGCCAGTAATGACCAA
TCAGTCAGAGTATGGGACCTCGCTTCCAAGCATATGCTTCGTAAGGCAGA
CATGGGTTATCCAGTCAAATGTTGCTGCTACTCCCCCGATGGTGGTACAA
TTGCAGTTGGACTCAATACGGGTGAACTTCAACTCCTTGACGCAGAATCG
TTGAAAAGCGTTGCTAAGAAACGAGATCGCAATAAACCAATAACTGTTGT
CAGCATATGCTTCGTAAGGCAGACATGGGTTATCCAGTCAAATGTTGCTG
CTACTCCCCCGATGGTGGTACAATTGCAGTTGGACTCAATACGGGTGAAC
TTCAACTCCTTGACGCAGAATCGTTGAAAAGCGTTGCTAAGAAACGAGAT
CGCAATAAACCAATAACTGTTGTCAGtttttctggTGATGGCAAACTTAT
AGCGGTCGGTACTGAAGACAAATCCATCGATTTCTACTCCGTTAAACCAA
ACATCAAAAGAGTTGGCTACTGTAAAAATATACCTAGCTATGTTTCCCAG
CTCGATTTCTCAAGCGATGCCAAGTTTATCCAGGTAGGTGAAACAATTTC
TTAAtttttctggTGATGGCAAACTTATAGCGGTCGGTACTGAAGACAAA
TCCATCGATTTCTACTCCGTTAAACCAAACATCAAAAGAGTTGGCTACTG
TAAAAATATACCTAGCTATGTTTCCCAGCTCGATTTCTCAAGCGATGCCA
AGTTTATCCAGGTAGGTGAAACAATTTCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000247_pilon | genome | sc0000247_pilon:112275..115861 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 640-816:3411 |
| Aaloc | 466-636:2872 |
| Aaloc | 346-465:2243 |
| Aaloc | 277-345:1820 |
| Aaloc | 160-276:1392 |
| Aaloc | 1-156:1 |
|
