XLOC_015337 (mRNA) -

Overview
NameXLOC_015337
Unique NameXLOC_015337
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000059_pilon:1281232..1289597+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015337 ID=XLOC_015337|Name=XLOC_015337|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8366bp|location=Sequence derived from alignment at sc0000059_pilon:1281232..1289597+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGCTTAAGGGTATTTTTGTGCTGGTCTTTCTAGCCAAATGTGTCTC AGACAGCCTTGGAAACCCTTTGCAACAACCGAGATCAAAGCTTTCTTCTT TCGTTGAAGaatatgaaaaagaaacaaaggcGAAAGGAGAAAACAGAGAA TTTCAACCAGAAAACAGTAAGTTAATGGAACATTTTAAGCTAACctccga aaaaattgaaatagctatgattttttcaaatataaatacGAAACCGAGAA ATTGCTTCGTAATGTTCTGGATGAAGAGCTTGCATTTctacacctccttc tcacagacccactggtaccccttcccactggaagaaTTGGCCGAAATAtc catttttttgaagccaCAAAGATTAAGCGGGAATGGATAAAGTAGcacaa tatttttcagtgaggatttgtttatccGATTATTAGAGTATAACTTTCAa atggggacgatatttttgccagTTTTTTCGGtccccagtgggtctgtgaa aagggggtgtttctcacaaactttttttaaagtccCAACCTTATTGAAAA GATCTTTAATTTTTTCGTGGCCtaagaaacagaaaaattctgtttttggt tGCCAAAATCTTTGAATTCAGAATTGATAAATGTTGGACGCTAGAAGGAG ATAGATTTCTaacaaacaccaaaaaaaaaattgagtttatATTGTCAAAG CAACAAAAATATACCCCCAATTTCACTCTCTACaaaaaaaTCgtattcaa tgaaaaaaatatccatTGATAAATACTTCTGAACTCTCGTCCTCACTGGg aattacatttttttcaatcgTGCTCATTGGATTTACAAGCTTTAAATACA GTGAACTCTCACTAATCCGAACTTTTGTTATTCGtatctttctataattt tcgGCCCTCGTCAAAGGAAAATCCTTGTAAaatgctttctataatttgaa tttctgtcattcgaacaaattagactcTCCGTTCGATTTCAAATAAGTGT GAGTTAACTGTAACGTCACAAAAATCCACCCCGccccagctggcacacaa cgttgttttaacgttgatctaacgttaaatggacgttgtgaacgttaaat aagcgttgaaacaacgttgtgtgccagctgccAGCCCCCATTAAATCAAA TTACACCAGATATTATTCATCCTTCTCGTTCTTTCCAAACTGATCGAAGC ACCAAGGAAAAGTATTAAAAACCTAAGTAAAGCTACCTTCAGGGAATAAA TTTtagcggaaagaaaatttgatggatttggcggatttagctAAAATCCA CGTTTTCCATCAACCACCAAATTTTGTTATCCTACCAAATTTAAATTATC TTATTCATTCCCTAGCTTCCTATTATTTCAGACTTTAAACAGTTTTTTAA CTTATCGGTTTTTAGCCTAAATTATCCTTCATCCGTCCAATCATAAATTT TTGCCGAAATTTCTATTCTTTAAAACTAGGCAATTACTaactctgttact aaaaatagaaacacggaggtcaaaatccggctcttttcgagtgcttccgt taaaaaatatgacgccATCTtgacgcatatcaagaatttctACTTTCTTC ACCAAAAAGACAAATCGAAGGAAGAATCCAAAGAAGTTGAAGAATTGAAA GCGTCGTTATCAACCGATAGTTCTGATgacaaaaatgatgaactttcaCT GAAGAAATTCAACGATGGACCACCAAATGCTAAAGATGTTGACCCTGCAA CTCAATTAAATCTTGATACAGGTAAATTCTGATATTGGGATTCTACCGTG GCTTACTATACTTACGGGTTCTAAGTCAACTTACAAGCACTAAGTCAACT AAGTTGTAAGTCAACTTAGGAGTACTAGATCAACTTAGAAGCGCTAAGTC GACTTAAAGCCACGGTAGGATACtcatcgaaatttttttcggatAATGCA AATTTCTTAATTAGAAAACATCTGTTGAGATTGAATCTTAATTTACTAAA TGATACACTTCATTTGCGTGGCCAAAATTAATTTCTAGAAAATGATTTGC TAGGATTTGATTGACCCGGCCTTAATCCCCTGGAGCAACCGAATGGTGCC ATGGATGTAGCCTGGAATTGCATTGAATTTATACCAATACATTCTTACTG GTTAAGGGGGTTTCAGTAATACTGAGAAGTTTGGatatttcctcgttttt tgaaatttgaagttcgggtgagaaagtcgcttttgggctatcTGCTCAAt gtaatcaaatatttcaaattgaGAGAAATTTATCTACTTCCAGGCTATAC TCTGAGCCTTTGGACGATTCAGacttaaaactctacccttccaacccaAG TTAGAGCGATTTTAACTCGTTTGTAGCTACAAGAATTTCATGGGtacttc ccttttttctcaaatattacgaccatgattgaaGGCTCCAAAAAATGGAA TGATTTAGGAGGTGgggtaaaattttaaaacaggGGTAAGCACAGGGTGG AGTTAACAGTGGTGGGTGTATACAATGTAATCTTTTGCCCCGAACCCTAC CACCGGTTATCCTTTTTTCTGTATATACCGTCAATTTTATGGCTGTAAGA TtctgaaatgaatttttttttgttaaatgaaCGAAAAAATTCCCAAACTT TCATTGTTTTCCCAGCTGGGAAACAACATTGTTTTAACGTCAATCAAATG TTCACAACATCCAtgtaacgttaaatgaacgttgaaaacgttctgtgcca gctgggttgccTGTTGGGAATGAGAAATAAATGTCTTCTTGCAAAGGCAT TTAATATAGGGAACAACTTTCCTTAGTGGGTAGGGAGTTCTCTTGTTGTG ATAAGGGGTGTAttaaaaccattgagtttcaagcccgaagggctagaggc gaaactttaacccttctcaggccaGAGAAATTAAaatcacttatttccca tccaagagtctcgcctctagcccttcgtgcTTGAAACTCTATGGCTGaaa caatttttccagtaaaaaaaCAGCTAAAGTAAAGAGACTCTACCGTATAC TGTAAACTAACCTTTACTTTTTCATTTAGCTTCAAACAAGAAGGATGCGC ACCCAGATGATggaccaatcgatcacaatgtCATTTATTATGACCAGAAT ATGAACCTCGTTCATGACGATGACGAAACGAAAAAACTGTTTGGCCGCGC GTGCGTAGCAGGCGAAGATAAGGAGAACTTGATCGACGTTATCAGTGACC CTAATTTCAAGTAAGAAACTTTCTAAAATATACAATGGATTTTCACTCAT TCCAACTCGAACGAACGGGAATCTTCTTTGCGGTTCGTATAACAGAGAGA ATCGAATcgtagaaagtattttaagagggtttctccttgatggGGACTGG AAagaagtttgaattatagaaagattcaaaaattaaaagttcaaaTAAGC GAGAGTATTTAGTATTAAGTATTGGAATACTCAGACGCTACTACGCTTTT CTCTTAAAACTATTGGTGACCCATCAAGTAGGTGGCCAATGACAGCTTTT ATAGTAgaagataaaattttttttcgaatatttgGATGAGTTGAACGCAT TCCGAGAAATCAAATCTTAATAAACCCTGCTATCTTGTACCCAAAGAAAC TTGTACCACGTTCTGATTTTACTAATGGACGTTGATACAATCCTGAGCGT TAAAATGATTTAGGAGCGATGACCGAGTGGTCAAATGCGTCAGCATCTCA AACCAGGAGTTCGCGGCTCGAATTTCCGCTCTTTCCAAcattccgttcag ttcatagatagccgagccggctggctgTGGATCCTGTGAAAACAaccgaa agactgtctaaaagcaCAGATATCGGTAAAGCTCGAagggcaactttaag ctttcaaaaaaaaagtgaagcaaaaatttgtctttttaaatttcttgcCG ATGTaaaggatctagcattttagctttttaattgttttcagagcgtcaac aagaaaattaagcggaaaacgctatttcgcatctctcaaaccagtaaAAT Tgattgttgtcacgtgatttctttggtaggaaatcctaccaaaacttgct tcacttttcgataaagacCGCAGATCTAGCCCATCGGGCTTACAGGTCTG TGTCTTAAAAGTCCAACTTGGCTATCGTCATAAAATGttgactctatcta tctatcaatAAAAGGGGACTGGATTCGAGTTTGTAAACCTCGCCGTTTGG AAAGAAATatatttcgaatatttttttagGCTGTCAGCTGGTGAATACAA gaaaataagtgaaaaattcCTTAAAAGTGTACGAAAGATTTTGCCCGAAA CAACAGAATTCCCTAAAGAAAAGAATTCCAAAGACATTTTGACGGCAATC CGAAAAGAGTTAACTGACAGAAGAAAGATATTGGAGGCAGTTGCAACATC AAAGACATTTGAAGATGTAAAAGACGGCGACCCTGATATCAAGTCGGAGA TCAACAAGATATTTAATTGGATCAGacattataaaacaaaagatgaagag caaaagAGGTACGCTTGTCTTTATgatactacaatcatggtcgtaatatt tgagaaaaaagggaaattcaccgggaagttttgaaaccacaatcgatttg taagtgctctaagtaggttggaagggtagagttttaactctgagttttaa catgagacttaagacctacgaccttaggatctgaggatccaaaaatttaa gaaaggtCCAATATAAGGCTCATAATATCGCCTGGAGGTCTATcaacccg agccaaattgaaatatccgattaaatctAAGAGATGGCTCAAAATCGATT TTCACGCCCGAACTCAAACTTTCGAAAAACGAGAAAATGagcttaattct caataaatttcgaccatgattgtacagtTGATTCTCTTTAACTGGAATCT CTATAACTCTGAtcactttaactcgaacaagttttatggtcccttaaGTT AAAAATGCCTTAcctttactccataactcaaaattcccttaattcgaaca aatttttcttccacttgctttttcgagttaaggagactccaCTATATTTT ATAGTCAGTCTGTCACGTAATAAAATTAATACAGTTTCTCTACctgtatt ttttcaagaaatttggtATAATGTTGTATGAACGTTATGAATACAAAAGC AATTTTTTGCAATGTTGTCACTTAGATTTAGCCAAATTTAGCTATATCCG AGTAGATGAAGAATTCTGTTTACGTACACTGGCAcgtacaaaatttttaa aggtcatggctataggccatttcacggtcgaaatggatcatgggtaatca ggactgattgcgcctccattacggcttcccgttggctagagtcaaaaatc ttcaatttttttcaaaacttttcaccaatagtaagtcgttattagcgcgc agtggtcctgattacccattacgctttgcgactgtgaaatggcctatgta AGAGAATCTGCTCAGACTGGCGACCGACTTTGATATTTATCATCCAGATT TGAGAAAACATTATCTGGAACCTAGATGCATAAAATTGTCATCCTTAAAG CTTCGAAGGtcgagaaaattttcaacatctggaaggtttagattacggat ttttgcaagaccgcgtcaaaGATTTTGCAGCTAAGGGTCTGGAACCCAGA CCTCGTTTTCGGAGATAGACGGGTTCAACCGAAAAATTCCAGCCTTACAC GaaagggtagttgaacccgactagAGATGCAGCAATCAAATGCTGACTAT CATTTCTCTTGGATGGGCAATTGGCCCAttcttttagagctttagcgtgg gcgggaACCAATCCTCAATCAGAATATcacataaaaaagaattttgaaat aggAATATGGATTCCTATAGAGCTGAGGGTTGTGTGAGCACAATGATCTT GTTTTATAAGTTTAAAGGGCTTTCATATGGAGGCGGGCTGAGATGggata gattttcgaacgtcaCGTGATTTACTTTTATGCATTTGATTCGTTCAAAA ATCCATCCAACCTCCTCCATAAACAGCCCCTAACTGTCTATGCAATATTC TTCTATCAAGAAACATTTTCAAGTTTCTTGCTCCTATGCAGAAAAATTTA CTAAaacaatgggctgttccataaaatttccatacataggggtggacgaa ccttttcaagtgaaaacaaTTTTCTTGGGAAAGTGTAGATACCCCTggaa agtggcaaaatttgctaaagaacccttggaaaaaattcttttcatgtctt aaagtgagggtggacgaacccctggaaattcaagaataactttttaccta ctgaaaaaatgaaaaaacacttctTTAGACCCCCTGAAAATTCTTCTCGA ATTATCCCCTAGAAATGTTCGTCCGTCCCCTGTATggtcataaaatggaa tggtccaATACCCATTTCTAAAACAAATTTTATCTCAAATGCAGGTTTCA GAGAATGTTGAAAGATTACGACAGTTATGAAAAGAGTGACATATTAACCG AAGTTGATCGAATTGCAATCAACGTCTATAGTCGTGACCCACAAGTCAAT GCGTTTTTACTTAACCCATCTGCATTCAAAGAAGGACAAGGGAAATGCAC TTTGAAGGTATGAGTTTTGGttttacagtcaactctctctaattcgaact ctaTTTTTCAATTCCTactttaattcgaactaaaatgttcgtcccctcag ctgaaaagtgatttaaaaaattctctctgtaattcgaatcgaatctttct ctaattcgaataaaatcgTTAAGTCGATGATTTTTAGTCTATTGAAGAAG CAAGTTAAAATTATTGAAAGGCTTTATTCATGGACTtcattttctgactt gaaaacaatggcaTGGAATATCGATTCCCATtaagtttcagtccgttatc tTTAcctcactggctgaaaaaacgaGTCCGGGTCTGTGCGAAAGGGGTGT ATGAATTTCCTTCATCGCCTCTGTGTTAAGGAGGTGTCGCCTAAAAGGGG ATGGTCCGTAAAATTGAATATCCAGGGAGTCTtgttttcgagtgtaaaaa tccagtGGTCACCCTTTTTTGACAAGCATACGAAATTTTTCAGGAATAGC CCATTCTACTATATTTCATTCAAAACGACTGAAGACTTCTCATAACGTCA CTGacaaaaagagttttttctaagaaagaaaTATTATCACTCGAATATGC TTCTTCTTTTGTATGAACAAAACATGAGATTagatttctatttggttgag ttacaggatgctttgaggcctattttcgcaactatagacgcttccAATGA GCGccctgtcagcaccttgaactgacaaCCCAAcccccctcacatggcat gggttgaccagggtgaaggttcattcacttgccaagtgagctgctgcgag tgggaatcgatcCTCAGTCGCCTATGCAGCAACCAatgtcaatgaccact ataccacagcgcctgtAGCCTCAGAAACGAAAAGGTTTATTTCAAGGTGT GATAAATGCAAACATtcctgaaaatgataaaaaataagagcattgaagcc ttttcaaaaatttactggttatATAAGAAAgcaagtctgcgaccgcagtc ggaggcgacccgaaggctcctctttcgatagctatctacccgaaggtagg gaaggcgccactctttctctgtggatttctccacttctccacttaccctt gatccttctcttaattgctgagcatcaaacaGAGAGCCATCAATTACCat ttttgggaatctttgatatgacccggctgggggttgaactcacaaccttg cgaaccgtagccggatgctctaccactgcaccacgGTTCGCTCTGGttat gaaaagctttttttccaTATTCCAGGCACATGCTAAATTGCTTCAAAATG CTTTACATAAGATGAGGAAATATGACGGGAAAATGTTGGTGAGAATTGAT TCCAATTGGAAGAAAAATGGAGAAGAACCTTTATCGAATACAGTGGAAAC ATTCTTCAAGTTCACATCCACCATGGATATATCTCACTTAAAAGGCGATG CTGTTGATGAGGAAATCAAAAAGATCGCTTTGCACAAAAAAGATCGGTTA CTTATTCGCTTTGTTGATCCTTCACAAGGTTATGAAATTGCACCTTGGGT TAAAACACAATATCTTATGAGTCAACGAGAAGTTTTATACCCAGTTGGAG CAACATTCGAAGTCGCAAAGACAGATACTAAAACCAAGGATAAAGAATTC CCGATCGGCTATTCATTATATAAATATGTATACGACCTCACTGATGTCCC ATCAACAGGTGTTTAA

Coding sequence (CDS) from alignment at sc0000059_pilon:1281232..1289597+

>XLOC_015337 ID=XLOC_015337|Name=XLOC_015337|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2784bp|location=Sequence derived from alignment at sc0000059_pilon:1281232..1289597+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGCTTAAGGGTATTTTTGTGCTGGTCTTTCTAGCCAAATGTGTCTC
AGACAGCCTTGGAAACCCTTTGCAACAACCGAGATCAAAGCTTTCTTCTT
TCGTTGAAGaatatgaaaaagaaacaaaggcGAAAGGAGAAAACAGAGAA
TTTCAACCAGAAAACAATGAAGCTTAAGGGTATTTTTGTGCTGGTCTTTC
TAGCCAAATGTGTCTCAGACAGCCTTGGAAACCCTTTGCAACAACCGAGA
TCAAAGCTTTCTTCTTTCGTTGAAGaatatgaaaaagaaacaaaggcGAA
AGGAGAAAACAGAGAATTTCAACCAGAAAACAACAAATCGAAGGAAGAAT
CCAAAGAAGTTGAAGAATTGAAAGCGTCGTTATCAACCGATAGTTCTGAT
gacaaaaatgatgaactttcaCTGAAGAAATTCAACGATGGACCACCAAA
TGCTAAAGATGTTGACCCTGCAACTCAATTAAATCTTGATACAGACAAAT
CGAAGGAAGAATCCAAAGAAGTTGAAGAATTGAAAGCGTCGTTATCAACC
GATAGTTCTGATgacaaaaatgatgaactttcaCTGAAGAAATTCAACGA
TGGACCACCAAATGCTAAAGATGTTGACCCTGCAACTCAATTAAATCTTG
ATACAGCTTCAAACAAGAAGGATGCGCACCCAGATGATggaccaatcgat
cacaatgtCATTTATTATGACCAGAATATGAACCTCGTTCATGACGATGA
CGAAACGAAAAAACTGTTTGGCCGCGCGTGCGTAGCAGGCGAAGATAAGG
AGAACTTGATCGACGTTATCAGTGACCCTAATTTCAACTTCAAACAAGAA
GGATGCGCACCCAGATGATggaccaatcgatcacaatgtCATTTATTATG
ACCAGAATATGAACCTCGTTCATGACGATGACGAAACGAAAAAACTGTTT
GGCCGCGCGTGCGTAGCAGGCGAAGATAAGGAGAACTTGATCGACGTTAT
CAGTGACCCTAATTTCAAGCTGTCAGCTGGTGAATACAAgaaaataagtg
aaaaattcCTTAAAAGTGTACGAAAGATTTTGCCCGAAACAACAGAATTC
CCTAAAGAAAAGAATTCCAAAGACATTTTGACGGCAATCCGAAAAGAGTT
AACTGACAGAAGAAAGATATTGGAGGCAGTTGCAACATCAAAGACATTTG
AAGATGTAAAAGACGGCGACCCTGATATCAAGTCGGAGATCAACAAGATA
TTTAATTGGATCAGacattataaaacaaaagatgaagagcaaaagAGGCT
GTCAGCTGGTGAATACAAgaaaataagtgaaaaattcCTTAAAAGTGTAC
GAAAGATTTTGCCCGAAACAACAGAATTCCCTAAAGAAAAGAATTCCAAA
GACATTTTGACGGCAATCCGAAAAGAGTTAACTGACAGAAGAAAGATATT
GGAGGCAGTTGCAACATCAAAGACATTTGAAGATGTAAAAGACGGCGACC
CTGATATCAAGTCGGAGATCAACAAGATATTTAATTGGATCAGacattat
aaaacaaaagatgaagagcaaaagAGGTTTCAGAGAATGTTGAAAGATTA
CGACAGTTATGAAAAGAGTGACATATTAACCGAAGTTGATCGAATTGCAA
TCAACGTCTATAGTCGTGACCCACAAGTCAATGCGTTTTTACTTAACCCA
TCTGCATTCAAAGAAGGACAAGGGAAATGCACTTTGAAGGTTTCAGAGAA
TGTTGAAAGATTACGACAGTTATGAAAAGAGTGACATATTAACCGAAGTT
GATCGAATTGCAATCAACGTCTATAGTCGTGACCCACAAGTCAATGCGTT
TTTACTTAACCCATCTGCATTCAAAGAAGGACAAGGGAAATGCACTTTGA
AGGCACATGCTAAATTGCTTCAAAATGCTTTACATAAGATGAGGAAATAT
GACGGGAAAATGTTGGTGAGAATTGATTCCAATTGGAAGAAAAATGGAGA
AGAACCTTTATCGAATACAGTGGAAACATTCTTCAAGTTCACATCCACCA
TGGATATATCTCACTTAAAAGGCGATGCTGTTGATGAGGAAATCAAAAAG
ATCGCTTTGCACAAAAAAGATCGGTTACTTATTCGCTTTGTTGATCCTTC
ACAAGGTTATGAAATTGCACCTTGGGTTAAAACACAATATCTTATGAGTC
AACGAGAAGTTTTATACCCAGTTGGAGCAACATTCGAAGTCGCAAAGACA
GATACTAAAACCAAGGATAAAGAATTCCCGATCGGCTATTCATTATATAA
ATATGTATACGACCTCACTGATGTCCCATCAACAGGTGTTTAAGCACATG
CTAAATTGCTTCAAAATGCTTTACATAAGATGAGGAAATATGACGGGAAA
ATGTTGGTGAGAATTGATTCCAATTGGAAGAAAAATGGAGAAGAACCTTT
ATCGAATACAGTGGAAACATTCTTCAAGTTCACATCCACCATGGATATAT
CTCACTTAAAAGGCGATGCTGTTGATGAGGAAATCAAAAAGATCGCTTTG
CACAAAAAAGATCGGTTACTTATTCGCTTTGTTGATCCTTCACAAGGTTA
TGAAATTGCACCTTGGGTTAAAACACAATATCTTATGAGTCAACGAGAAG
TTTTATACCCAGTTGGAGCAACATTCGAAGTCGCAAAGACAGATACTAAA
ACCAAGGATAAAGAATTCCCGATCGGCTATTCATTATATAAATATGTATA
CGACCTCACTGATGTCCCATCAACAGGTGTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_015337XLOC_015337-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000059_pilongenomesc0000059_pilon:1281232..1289597 +
Properties
Property NameValue
Aaloc952-1392:7926
Aaloc790-951:6496
Aaloc511-786:4281
Aaloc331-507:3082
Aaloc169-327:1612
Aaloc1-165:1