|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000066_pilon:1167694..1175404+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015313 ID=XLOC_015313|Name=XLOC_015313|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7711bp|location=Sequence derived from alignment at sc0000066_pilon:1167694..1175404+ (Clytia hemisphaerica_ch_hm2_pilon)
atggtTCAAACTGTCGCGGGTAagctttatttcaattttttttataaact
cgGAAAAAGTCGAAAACCAATGCTAACCAGTAATTATTAAGGAGAGTCTG
ATTTATAGatagacaaaatagaaaattagaaaaatttatttaaggTTTGG
AAGGGTTAAGTTTGACTTTCTTCGACTAAATTATGTGCACTGATTTCGAT
TTATAATGCAAACTCATGATAtacctaaagtctattcacgataagtgtgc
actcttttttcatttacctataacttttgaaggaattattcaatctttat
aaatttggtatcgttggaaagatattagtgagtggaacaatttggaataa
aaaaatctatatcaaaattctaaaaatgaagatgaaaatgaagaagaaaa
aaatgaagatcttgtagaaaggtgctataactatcattttcactgaagtg
actccttcattatcgaacatcatcactgtgaaaaaaattctcaaaaataa
tcattcagtcaaaagatatcaaacaaagttctaagctgattgacgtctaa
aaacgctgttttctgctgttttttgctgttttttggggtcaatcacttat
taactttgtatcataactttatattgaaaaaatattttagtgaaattttt
tcacagtgatgacctcctaagatcaaagaatctctccagtgaaaatgaaa
gttatagcacttctctacaagatcttcatttttttcttcttcattttcat
cttcgtttttagaattttttaaagacttttttttttcaaatcgttccact
cacaaatatctctccaacgataccataccaaatttataaagattgaataa
ttccttcaaaagttataggtaaaagaaaaaagagtgcacacttatcgtga
acagactttaattcGAATATTATATACTATATATTATGACTTCTTTTGCA
TTTAATACACCTCTTTTCGTTTTTCCCACTCCAATAGTACtttcataaaa
actttttgatggtttttgtaGGAAGCTTCAAGCAACAAGTACTAGACGCG
CACAATAGTTGCCGCCAAAAGCATGGAACACCACCCCTTCAATGGTCAGA
CGCCCTAGCACAACAAGCACAGAGTTGGGCGGACAAGATTGCCAAGAAAG
GCAAATTCGAGCACTCCCCAAGCAAACTGAGGAAAGGACAAGGAGAAAAT
ATCGCTTGTGCTGGAGGTATAACTTCTTTTTTACAACTTCAAAAGCAGAG
CCACTGCGATGTACTGGTCTTGCTTGATTTCTAGATGGGGCCAACTGTAG
AATTATGTTAGAATTGAAAAGTGTCGATCTCAAGGCTAATCGATGAAATT
TATGCCGTCAAGGTTAAGGTTCATAAAAATATGGACCCTAAGTGAACCCA
TCTAGGATGATTTATTTCGTCCGCTGACAAATGAGTGACTTTTAATGGAG
CTAAAGTcgatttttaaagcttttttagctaaaatctttcttcaaatttt
tgtaagtaagtttCAACGAGGGgctgatttttcgttttttgtatttttta
tatcttaCCTGTACAGGAAGAGGAGAAACTCCTACTCTTTTTATTGTCCA
ACTACCGACCCCATGAATCGACAAGCTTGAGAGAAAAATGGCATTGAGCT
CCTCGCGTCAtttttttGGCAAAGATGCAAAAACTTGATTGCTATACCTG
ATCAAGGCCTCCACTCCTCATCATTAATTAGTTTAACAGCCCAATTATGC
CTTAGAAACAAGTACATTATCAAGCAATTATATGCTTTCTTCTTTAAGAA
CTAAGTAGCTCTTTTGGATTCTTTTGGACAGTCTGTCCGGTTAAAAGTTT
GGTACTAGCTTACTTAAGAGTTTATTTAAGAGTTTAGATATGATATTTTT
TGTCCGTACTTGTATGCTGGTTATATCATATCCCAAGTTGtttgaaattc
cttttttttctctgcTTGTGTTTTGTGCTTCTAGTCTTCATGTTAtctta
tgaaaaattgaaaggcGATTTTCCTACAACCAAAACAAGCATCCAGTAAT
TATGTAATTGAAATTCCTCCAACGTAACCTGGTAATATTGATACCAATTT
TTGATGGAGACCTCTTTCTCTAATGCATCTTCTTGATTGTCCAATTATGT
AATCTGAAGTTTGGTGCCAAATTGAAAGGTCTGTCCAGCCTTTTTAAGTT
CTGTTGATGATACTGTAACCAATAAACTTATTCAACTGAAATTATTATTT
CAACTGAAACTATTATTTTGCACataccatgaaggtaataagaaatagat
ggagaattAACTCCTTTTGTTTCATTGTACctaatcatcggaagcaaacg
gctccttagttgcaatgggaaaaagtgattaattttgtgtgcactcatgg
gaatatttaagttcataaaaaactgaataaaaagatgttggatttttaac
aactctattgtgagataatagctttgttgatcaaaaaaagaaaaagcttg
ccgtaacaagcacaaaatcctatatttctaagggtcccctctcataaaat
tatcgataaatttcaaaaagaattctatattACGATTGGTAACCTTTTAA
TTAATCATCCACCGGAATTTGAAAGccccctcccttttagacgtaaagat
ttctagtgaagaaattttcaaggaaaatgtgctgaaactctGAAAATTAG
CACAGTGTTCGCCCAAAAATGCATTGATATGGAACCATAGAACTATTGTA
ACCttactttgagaaaaatatttttgtatcacgtttgaacaagaactttt
tgcataatatgtttatttcaatcaggttaacattctcacttctgttctta
tgaatttacatttcggatttttttacttccaatgatggtacatcaaagaa
aagcttctttgaatagatttataaaagattttaacgaccatttaggtcat
taccgagacgttttctctccatctatatctttattaccttcatgcaCATA
CTTTATGTACAATGGTGTATCATCTTTTCCTTAAAACGTTCACCTTTTCT
TATTCCCTTTGTGAACTGTTGCTTATCGCATCAGCTAAATTATATAGCTA
ATATCATGCTTAAACAAACTACCGTATTACTGCGAATAAACGCCTGGGTA
TTtattgccaccggaggaagcctaaagcttctgaggatggcattcatatc
ttcacgcataaggaagttgggcaaacatctcataattttgcgtttttcag
tattttagttccacttaacggtagcattcttatcttacggtctctctatt
gttttatcatcatcaaaaagactttcccggagttattttgatctgattac
tcattttgaaatgtcagtttgtctttttcttatccctggagagttaaatg
aatccaaggaaattcccttttctgggagattccctttttataccacaagt
agttgtTAAGCGCTCTCCATAGGTTAAAATATTACTCTACCcaaagtatt
cgaacagttatgttactgaacgtgtacattagtaaaataacatatgaaga
gcagtatcttcagatatatacgctttatataggaaaaaccagtaagtcat
ataaTTCTGGCTCGGTCgctcttaaatttatataagtttttcagccttaa
atgtcaatattaattaaaatggaaacatgtacttctcagtaatttctgaa
atctgaggttcagattcttcttaatttgttcttaggttttggccaaattt
cagcctcgtattcttatgaaattgttctcataaaaaacgtgtaagacaag
gcacagatgtcactctaagtagactgtaaatcacttccttgacacatttg
ttagcatttgaaagaattttgtctcagatgagaggtcaatcttaacaaaa
attactgtagggctaagatcattccttttgaacgcaaattcaactttatg
tgttcgttttgctgcggtggcaccttaatgaaagttatggctagttaatt
ttttttatttcaggaggggcgtttattcgaggagGCTTTTGAAAGAatgg
ggcgtttattaaataatctttACCCAAAGTCACTTTAATAAAGTGAATGG
GAACCTTGTTTTgccttttcctttttcattcatttcaaaTGTGTCATACG
TTAGTATGAATACTGATTGAATGAATATGATTCTCCCTTACCTGTTCCAA
ATGAACGCCCCTCCTAAAGGGGAGCTATTTATTCGGAGGGGGCTGTTTAT
TCTAAGGGGGTGTTTAAAAGATAAGGGCGTTTATTCAAACTGATACGGTA
ATTTGGTTCGGTGAAATCACTTTCTGTACTGAGGGTCGCTTGCGTTTCGA
AGTGGCATCATGTAGACCTCTGTCTCACGTCAGCCGCAATGGATGCAATG
GAGATATTCTCATgttttttcaactcaaaaaaactagtaacacccctgtg
tcacagacccggtgggccccccaccccggtggaaaaataggccacaAAAT
CGTCCTCGGttgaaaaaatatcctacaatttcaaccccactgggaaattg
ctctatgattttatctccattgaaaattgaatgtaaaaaattgcactcca
aaaccattcccggaattttcgagctggaaacaatagattttctatcccca
ttggcattttgatagaaattttcatccccactgactgaaaaaattctacc
ggggcactgagacaggggtgtctagTAGGAATGGCTTTGgtgtgaaatta
tttttctattgaatttcGGATTGGGATGAAATAAAGTCTATTTTCCAGGT
GGGCTGAGtttgtagggtattttcccagttaggacgaaatttaaaccaaa
ttttccagtgggtagggtgacccaccgggtctgtgacacaggggtctATC
ATGTGTGGCTCagaaaattggctttaaataaTACCCCCTTTTATGTATTT
GCCTCACTTCAATCCTTAACAAAATAAGtcgatcttttcaaaaaaatttc
ttagtttttttatgggctttattttttatgctttattaCCTAATCCAGCC
CCCACCCAACCTATCCTTTAACAGTGCAGTGTCTGTCTTAACAATTGTaa
agaattaagaaacaagaaaactaaaaaattgggaaaagaaaatttgtctA
TGTCTCCTTTCAAAAGTCCAGAGTATTATATACCTAATATTTTTAATCGC
AGCGGAAAGAGCCGCGACAGTGGCAGCGGACCAATTGGGCCAACcctttt
taaaagcaaaaagaaaatttaccaaTAAAGCCAAACTTTTTTAGATAACC
ATAACCTGTTTTAGGCGGTTTAGAAGGGCTACAATTCCAAAAATTATTGG
TGCCTCCTTAGTCAATATATCATGGCTCTATCAATTTCAAAGGGGAGCCG
TGGCCCCTGATGTAAGCCAAAATTTTACTCAAATTCTTCGTTTTCCGTAG
GAAAAGAATTGACAGGCGAAGATGCCGTCAAAATGTGGTATGACGAGATC
AAAGATTTCaacttcaaaaatgtcaaatacaaTTCCAAGTGTGGCCATTT
CTCACAAATGGTATGGGTCAGTACAACCGAAATAGGAGCCGGCAAAGGTA
TGAACTTACTAGTAGAAGAGTAGAAAATTTCTGTAACCATTTTAGACTCC
TGAATTCTAGGAAAACCTTACTCGTTAATGCTTTAAAGTGTgggagtact
taggcaaaatgggtgcatgttatgtgcgagccataagtgTATTTCTTCAG
AGCCACCACACGATAAGTGTAAAACTTTGCAGGGTgactgagaaaggggt
gtttctAATAACAAAAAAGTCACTTAAAGGTCACTTAACAAAAGCAAAGA
CTCATTAcccttttgaataaaaaaacaacaacaaaatgttATGGTTAGTA
TTACAAGAAATCATCATCATTTGATCATTAAATACCTCTTATTTCTTAGT
TTCTCGAAGGACATCGAGATGTTTTGGCAATTATATTAGCTTGAGCCATC
GCTGAAAAACACCCTCTGAATAACGAGATTTGTTGATGATGTAATGATGA
TATGTAATGCTTTTTAAACATGACTTAATCTTTTTACCGAAAATCCCTCT
TAAATGCGATAAAAATCCAGAGACCTTCAGGGCTgttctttttgcaaaat
taaatagATTAGGCAAGGGTACGGGTAAGGGTAGcgtgattattttttta
ttccgtaacattttaaaatttattttacttttttctctttgtaatctttt
aaGGTACCGCAAAAAACGGTATGCAATTCGTAGTATGCCGTTACAATCCT
GCTGGTAATATGCTAAGCGAGTTTAAAAACAATGTCAAACCACCCGGTGC
ACCCGCCTCTACAGCTCCACCTCCCAAACAACAAGCCGCCGCTGCTCCAC
CTaaaactcaaccacagcccaaaccaatcaaatcacaacccattcaaaaa
tcaaaaccgaaaactcaaatcgtggaaaagccaaaaccagttaaagttgt
gaagaaaaaagcagaccagaaaccaaaaacaaaacttaagaACGTTGAGC
AGCCTATAATTCCAACAAGAACACAAGTGGTTCATGCAGCTCCTCCGCAA
ATGAACAGAAAAACAATGGTTTTGAAATCAGAGaagaatttttataagaa
aacaacaacaactatAACCAACAATAATAACATTGAGCCAACTATCACAA
CCGATCAGCCAATCAAAGTGAAGCAAAATCAACGAGCTCCTCCAAAATCG
AATGTGAAAGTCACTGAAAAGcgtaattttttaagtttttatttttccga
aTAAGATGATCCTTCATGAAATTCAACAAATGTCACTTTtgcaagctatt
tttttatatttttatacaatACAAATCTATCAAATCAATGCGGTTGGAAA
AATGTGTTTGTTATTTTGCTCATAGACATCAGATACGACAGCACCTTGAA
ACAAAGCAGTGGCAACAAAGTCATTTACGTCATGGATTACATTACTGAAG
TCAAAGAAGTCAAGCCGAGTATGTTAAGGGGTCTTATTTACATACTCCTT
ATTTAGGCCCGGTGCAAGGCACGAAAAAATAGGTTACCTCCTCAAGCTAA
GAATTCGCCAGCCTATGATCTAGAATTcattaaagtttatttttcatacT
CCAGCCTATCAAAAAACGCCCCCTTGTCATAGACCCACTGACAAAACTCC
CCACtggaaccccttcccactggaaaaattgtcaaaaatattacctCTGG
TCTAAAATTATACTCCAACTTTCGCcctcgctgaaaataatcaaataacc
aaaaaatatgcaaaatattatgctaattttcccatccccactgaattatT
CTTTCGAGTcatgacttgaaaacaaaagaattgaaatctccaGCTATAAA
TAATAtgggaatatcgatccccatTGTGTTTACTTTCATTTCcactggaa
gaaaaaaaataccggGTCTGTGGGAAGGGGGTGTCAAAATTGAAGCAAAA
CTCTTTTATATTGCTATGTCAGAGCTCCTCAGATACCCGGGGAGAATTTT
CTGACAAACAAATTATCTTACGTTTGCTGTTCTATTTTTTAGAATGTTCC
ACAGTTCAAGTCAAGAACATTGGGAAAGAAGCTAAAGTAGCAATGTGGAA
AACCAAAGAATATTTAAAGATAGGTCATTCATACACTATCATGCACCATT
GTCTCTCATGA Coding sequence (CDS) from alignment at sc0000066_pilon:1167694..1175404+ >XLOC_015313 ID=XLOC_015313|Name=XLOC_015313|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2184bp|location=Sequence derived from alignment at sc0000066_pilon:1167694..1175404+ (Clytia hemisphaerica_ch_hm2_pilon)
atggtTCAAACTGTCGCGGatggtTCAAACTGTCGCGGGAAGCTTCAAGC
AACAAGTACTAGACGCGCACAATAGTTGCCGCCAAAAGCATGGAACACCA
CCCCTTCAATGGTCAGACGCCCTAGCACAACAAGCACAGAGTTGGGCGGA
CAAGATTGCCAAGAAAGGCAAATTCGAGCACTCCCCAAGCAAACTGAGGA
AAGGACAAGGAGAAAATATCGCTTGTGCTGGAGGAAGCTTCAAGCAACAA
GTACTAGACGCGCACAATAGTTGCCGCCAAAAGCATGGAACACCACCCCT
TCAATGGTCAGACGCCCTAGCACAACAAGCACAGAGTTGGGCGGACAAGA
TTGCCAAGAAAGGCAAATTCGAGCACTCCCCAAGCAAACTGAGGAAAGGA
CAAGGAGAAAATATCGCTTGTGCTGGAGGAAAAGAATTGACAGGCGAAGA
TGCCGTCAAAATGTGGTATGACGAGATCAAAGATTTCaacttcaaaaatg
tcaaatacaaTTCCAAGTGTGGCCATTTCTCACAAATGGTATGGGTCAGT
ACAACCGAAATAGGAGCCGGCAAAGGAAAAGAATTGACAGGCGAAGATGC
CGTCAAAATGTGGTATGACGAGATCAAAGATTTCaacttcaaaaatgtca
aatacaaTTCCAAGTGTGGCCATTTCTCACAAATGGTATGGGTCAGTACA
ACCGAAATAGGAGCCGGCAAAGGTACCGCAAAAAACGGTATGCAATTCGT
AGTATGCCGTTACAATCCTGCTGGTAATATGCTAAGCGAGTTTAAAAACA
ATGTCAAACCACCCGGTGCACCCGCCTCTACAGCTCCACCTCCCAAACAA
CAAGCCGCCGCTGCTCCACCTaaaactcaaccacagcccaaaccaatcaa
atcacaacccattcaaaaatcaaaaccgaaaactcaaatcgtggaaaagc
caaaaccagttaaagttgtgaagaaaaaagcagaccagaaaccaaaaaca
aaacttaagaACGTTGAGCAGCCTATAATTCCAACAAGAACACAAGTGGT
TCATGCAGCTCCTCCGCAAATGAACAGAAAAACAATGGTTTTGAAATCAG
AGaagaatttttataagaaaacaacaacaactatAACCAACAATAATAAC
ATTGAGCCAACTATCACAACCGATCAGCCAATCAAAGTGAAGCAAAATCA
ACGAGCTCCTCCAAAATCGAATGTGAAAGTCACTGAAAAGcGTACCGCAA
AAAACGGTATGCAATTCGTAGTATGCCGTTACAATCCTGCTGGTAATATG
CTAAGCGAGTTTAAAAACAATGTCAAACCACCCGGTGCACCCGCCTCTAC
AGCTCCACCTCCCAAACAACAAGCCGCCGCTGCTCCACCTaaaactcaac
cacagcccaaaccaatcaaatcacaacccattcaaaaatcaaaaccgaaa
actcaaatcgtggaaaagccaaaaccagttaaagttgtgaagaaaaaagc
agaccagaaaccaaaaacaaaacttaagaACGTTGAGCAGCCTATAATTC
CAACAAGAACACAAGTGGTTCATGCAGCTCCTCCGCAAATGAACAGAAAA
ACAATGGTTTTGAAATCAGAGaagaatttttataagaaaacaacaacaac
tatAACCAACAATAATAACATTGAGCCAACTATCACAACCGATCAGCCAA
TCAAAGTGAAGCAAAATCAACGAGCTCCTCCAAAATCGAATGTGAAAGTC
ACTGAAAAGcACATCAGATACGACAGCACCTTGAAACAAAGCAGTGGCAA
CAAAGTCATTTACGTCATGGATTACATTACTGAAGTCAAAGAAGTCAAGC
CGAACATCAGATACGACAGCACCTTGAAACAAAGCAGTGGCAACAAAGTC
ATTTACGTCATGGATTACATTACTGAAGTCAAAGAAGTCAAGCCGAAATG
TTCCACAGTTCAAGTCAAGAACATTGGGAAAGAAGCTAAAGTAGCAATGT
GGAAAACCAAAGAATATTTAAAGATAGGTCATTCATACACTATCATGCAC
CATTGTCTCTCATGAAATGTTCCACAGTTCAAGTCAAGAACATTGGGAAA
GAAGCTAAAGTAGCAATGTGGAAAACCAAAGAATATTTAAAGATAGGTCA
TTCATACACTATCATGCACCATTGTCTCTCATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000066_pilon | genome | sc0000066_pilon:1167694..1175404 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 976-1092:7595 |
| Aaloc | 883-972:6928 |
| Aaloc | 364-879:6256 |
| Aaloc | 217-360:5453 |
| Aaloc | 22-213:1024 |
| Aaloc | 1-18:1 |
|
