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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000408_pilon:26810..31866+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015283 ID=XLOC_015283|Name=XLOC_015283|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5057bp|location=Sequence derived from alignment at sc0000408_pilon:26810..31866+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTGAAGAAGTTTTTGAAGTTgaagaagtacaaacaaaaatgaCAGA
AAGAGTTTTAGAAATCCTTGAATCTGACGAGGAACGTAAAGAGCAACCTT
TCAAGCAGAAGACCATTCACACAAGGGATGAAAAACAGGTTATTTGTATT
GATTCATCTCCTGAAAAGGAGACAGGTGGTGAAGTAGAGGaaatcataac
ttttcgaaaaatcaatGTTGTTGATAGTGAAAGTCCTAATAAGAGGAAGA
ATAGAGTTTATCGCCAGAGTACAACaaaaaatgagtcagactctgattct
gaatctgaaaagaaaaagaaggacaaacgtaaaaaaTCTAGCCGGTTGTC
ACGAAAGAAGGAATCTCCTGATGATGAGGAGAGACGTCTAATAGAGCCTC
CATCTCCTGAGGAAAAGCTCAGGAGTAGGCAAAAAAGTGAGATCAGTAGA
GATTCAGTTCGAAAAAGAAGATCATCTATTGAATATGGGAAAGAAAATGG
CCAAGAGCAAGAAGATGAAGAGGAAAGTGAGCTTCAAAAGATTCACAAAG
GAATCAAACAAATTCGTAATTTCTTTGATGATTCTATGTGTCataagatt
gaaaagaaaattgatcaaattgctGAAAAAGCTTTATGTGgactttataa
acaaaaaacttaTGATCGAGCACctttaagaaataaatatttctttggTG
AGGGTTATACATATGGAAAACAAATGGAGCATAAAGGTCCAGGTCAAGAA
CGCCTCCACGTTAAAGGAGATGTTGATGAAATTCCCAAATGGATACAAAA
GCATATCGTACAAAAAGTCTATGAAGAGAAGCTGGTTCCTGATGGATGGA
TCAACAGTGCAGTTGTCAATGAGTATTTCCCTGGAGGTTGTATTGTTTCC
CATATTGATCCAATTCACATTTTTGATCGTCCAATCATATCCATCAGTTT
CAACAGCAAGTCTTATCTATCATTTGGTGTCAAATTTTCATTCAATCCAA
TCCGTACTTCAGAACCAACACTGGCACTCCCTTTGGATAGAGGAACACTA
ACAATGATCAGGTACTGAATCCTACCCAGGTTTTTTAGtcctttttatca
ttttgactCAATTAGTTAGGGGCAAGAAAACATACATGATCACATTCAGT
CAGGGCCTCTTTGGTCTTttataacattagttcggatagaataaaaacat
acctgatcaacacaaccaaaccttctgtcttgcgtttactctttccttcc
caacaacttacgtgtttgcttatgtaggttttaagatccacaagtaatga
acctcatAGCTTTATTTGAATAAATCTGTTTAAAAACCTTCtttcaggtt
tcattccgtacgtttttttatccacgtggtgaaccagtttccccgatttc
tcgataattaaaaattggaactttcccgtgggcgcgattgggcgcACCGC
catcgcaaaatatttttcgtgaaaatttaccgtattctaacgcttatata
atctagataggaaacaaatattagatttgactcttttttgctcgtatttc
taaattttacgataaaaagaactatttacaaattattttctttaacaggC
GTTGAATCGATATTGACATATtttatgatgtcataatcaatgccgtgcat
attttgtcagcgccgtgcatattatgtcaacatccttttcattggataaa
taccactaaaatatacaagaaaagtaaacataaatttatcgcccgcgagc
acggcttagctaagcgcacctctcttattcattatctaagaattggagcg
ggcaaagattactgcgcgggctgatagcgggcaaaggttatttgaagata
ttttcagttataatccaaggtagaacaaactaaacatagaaagagggtat
tttttagtgctctatacaatgatcggtattttttttgaattctatgttta
gatttttctacccagccccgttgctatgtacgcacgccctgttgctaaga
cctttgcttgaaatcgaaagtgaaaccaaaataatttagcgcaaactgcc
gtttgcgtaatatcgataaagtgaaatgaggtcctgactgatcACATTGG
TACGACCTGCTCAAGTGTaaaaattgtgtacaaaaacaaaaacacatgaa
aatttgcatgtgtaccgtcaactgctctaacttgtaTGAACCTccttgat
ttgagttaatgaatggggtattaaaaaatacacgatttctctttcacact
gagtaggcttttaaatcgaaatatgaaaaaaatccgtagtggaacacaca
taaatgtctggaacgaagaggaccaaattagtggcaaaacgatggagcgt
ttgacgtcactcgtacagcaagttacacactcgtcaTTTGTTTATCCCAt
tgggcgataggcggttaggcggcgggtgttctctaattctccaatcggcg
gccggtcattttgaatgaaaacaaaaatgttaaaaaagggCGTGCTATCA
gaagtgaaagttatcgtgacataaaatgacagaaagtatgattgataaac
ttggtggagttatcaaaacaaatttcttgtcAAAGGCATTTaacattaag
tgaaaatacaggccagatatcaacagtcccatgttttgtccatacgtccc
aagttagagcagtttaTGGTAGTCTAGACGTCACAATTCATATTCAATTT
AAATCTCAACAAAAACATTCACACATTTCAAATAGACCAGaaaagatttt
tagactaaaatgaaaatttctttctccaaaatttttaaattttacaaatt
attaGTATGCATTTTTGGTTGCCATTGAGAAAAACATCACGCCAAACCAA
TAAATGTTGTAATGGGAGGTTTTATTATGAAAAATGATGCAATAGAGGAA
ATGTCATTTTGCATACTGTAATTAGAAACTACTCCAGCATCAAagcaata
ataagaaaaaaataagtgttttttttatattttatctcTCTTGTTTACCG
CCTGGTCTTCCTAAAGCAATTTGCATTCTCAAATCAGAATTTAGTCCGCT
TGCTTGCCCTCACTTCGCTGCTAAAGCTGTAAGACCTGATCAACATGAGA
CGGCTAGCTATTCTGTAACAAAAATAGGTTAATTTCCCCCTTGTTAGTGA
CCACCATTTCCTACTGAACATACAGCTTTCTGTtaaatgaaaacatgaaa
aagaagaaatagagGCGAGTTCATTTTctaagaaaacatggttggtcata
cATGATTGGTGTTACATGCAAACttgtttatggactttggtgtaatcttt
ggatgttttatttTAAATGGGTTTAGATCTTGTGATGCTGCTTTTCATTA
ATTTTCGTTTGGCTGCCCTGGGTTGGgtaggaaagttttggaaacattgg
tttgcactttcattatatttttagAAGTTTGTATATTgaggaatttttgt
tttttctaaaatgttgagcttggatatccggGTGGTAATAATAACTATGC
ATTAAATACGTGTCAATGTATATGCTGGAGTTTTTCATTATCCAACATGA
CATTGTGTCTAGTGAAAGGTCTATTTCTGATGTcagtaaaaaattgaaaa
ttgtttttgtaaaaatataatAGAGGACAGGCACTGAATATAAGGAATGG
GAGCTAAAAATCCTTTTTGAAATTGATCCACAAGGTTATCATGCCACCTA
TTTATAGGATTATATACTGTAATTACACAATATGTTAGCCCCTAATTACC
AGAGTTAAAACTATGGTCAAGTTTCCAAGAATTTTATAATTTCATGTCTG
AGGCAAATTTTACACTTAGGAATCATACGCTAAGTAATTTACATGAAACA
CTTAAAGATCTAAtttttttGATCCCCTTTGATGATAGTGTTATATTTCT
TGTGataaatgattttcaaaaatcttcattcTAAAGCACAGCAGATATAG
TAAAGAGATATATAATTCTTTGCTGTATTAATTTATCATCTAATAATCTT
GAAAACATTCGACTcaaaagtatgaattttttatttttattttttagtgg
TTACGCAGCAGACAATGTTACACACTGTATTAGACCTCAAGATGTTGTTG
AAAGAAGATGTGTCATTATATTGAGAAggtaggttttttttttttgagaa
tataTATTCTGTTATGGATAAACAGGTTTCTAAGAATACTTCACcctcag
ccaaaaaaaaaacaccattcttataaaaagccttaaaaaccTATATTATC
CATAGTGTCAGTCCCACAGAAATCTGAAGGATACCTAGACCAGGTTAGGG
CCTTGGGGCTAAtattttgcaattctttggggttacctattcatttgGGG
TACCTAGCTGTTTTGATGGATGCGTATATTTTCCTAATTGAATACTTATA
ATAACAAACCATCTCAAAAatcattaagattttaggaatgacaaaagaac
aaaaagtgtcaactCAGAAAAATTATCGGCTAAATTGGGGTGCCTAACCT
AGCAATTTCTCAAGGCGATCTAACTCGTTGGGTGCACCATGCTTCAATGt
tggcacctgaaaagtgggttGAAACCATGTTATCAGATATCGTCcctcac
atgactaaaggttcaatctcaaaataagtgtcttggaaaattggaaatct
tgcaatcctgttctgcctttgagattggcctttttgtcatatgaaaacat
cgactattcctctacatgaaaaaagggcaatctcaatctcaaagatgacc
accacagtaaaactctaaatttcataaggtattaattttgagattaaacA
TGACTTAAATGCGAGGGACGATATTATAACTCTGTACTCACATTAATTTG
TACATTCTATTGTCCAGAGTGTTCCCTGATGCTCCGAGAGTTGGTGATCC
TGAACCAGAGTATCCTTTGCGAATGATGCATCGAAGTCGAGCATTAACTT
CTGGTGGTGATTTTTCATCAAGAAAACGACAATATGGTGGAAACAATAGA
GActattatcaaaataataataataacaagagAAGGAAAACACGACATAG
CTACTGA Coding sequence (CDS) from alignment at sc0000408_pilon:26810..31866+ >XLOC_015283 ID=XLOC_015283|Name=XLOC_015283|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2664bp|location=Sequence derived from alignment at sc0000408_pilon:26810..31866+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTGAAGAAGTTTTTGAAGTTgaagaagtacaaacaaaaatgaCAGA
AAGAGTTTTAGAAATCCTTGAATCTGACGAGGAACGTAAAGAGCAACCTT
TCAAGCAGAAGACCATTCACACAAGGGATGAAAAACAGGTTATTTGTATT
GATTCATCTCCTGAAAAGGAGACAGGTGGTGAAGTAGAGGaaatcataac
ttttcgaaaaatcaatGTTGTTGATAGTGAAAGTCCTAATAAGAGGAAGA
ATAGAGTTTATCGCCAGAGTACAACaaaaaatgagtcagactctgattct
gaatctgaaaagaaaaagaaggacaaacgtaaaaaaTCTAGCCGGTTGTC
ACGAAAGAAGGAATCTCCTGATGATGAGGAGAGACGTCTAATAGAGCCTC
CATCTCCTGAGGAAAAGCTCAGGAGTAGGCAAAAAAGTGAGATCAGTAGA
GATTCAGTTCGAAAAAGAAGATCATCTATTGAATATGGGAAAGAAAATGG
CCAAGAGCAAGAAGATGAAGAGGAAAGTGAGCTTCAAAAGATTCACAAAG
GAATCAAACAAATTCGTAATTTCTTTGATGATTCTATGTGTCataagatt
gaaaagaaaattgatcaaattgctGAAAAAGCTTTATGTGgactttataa
acaaaaaacttaTGATCGAGCACctttaagaaataaatatttctttggTG
AGGGTTATACATATGGAAAACAAATGGAGCATAAAGGTCCAGGTCAAGAA
CGCCTCCACGTTAAAGGAGATGTTGATGAAATTCCCAAATGGATACAAAA
GCATATCGTACAAAAAGTCTATGAAGAGAAGCTGGTTCCTGATGGATGGA
TCAACAGTGCAGTTGTCAATGAGTATTTCCCTGGAGGTTGTATTGTTTCC
CATATTGATCCAATTCACATTTTTGATCGTCCAATCATATCCATCAGTTT
CAACAGCAAGTCTTATCTATCATTTGGTGTCAAATTTTCATTCAATCCAA
TCCGTACTTCAGAACCAACACTGGCACTCCCTTTGGATAGAGGAACACTA
ACAATGATCAGATGGTTGAAGAAGTTTTTGAAGTTgaagaagtacaaaca
aaaatgaCAGAAAGAGTTTTAGAAATCCTTGAATCTGACGAGGAACGTAA
AGAGCAACCTTTCAAGCAGAAGACCATTCACACAAGGGATGAAAAACAGG
TTATTTGTATTGATTCATCTCCTGAAAAGGAGACAGGTGGTGAAGTAGAG
GaaatcataacttttcgaaaaatcaatGTTGTTGATAGTGAAAGTCCTAA
TAAGAGGAAGAATAGAGTTTATCGCCAGAGTACAACaaaaaatgagtcag
actctgattctgaatctgaaaagaaaaagaaggacaaacgtaaaaaaTCT
AGCCGGTTGTCACGAAAGAAGGAATCTCCTGATGATGAGGAGAGACGTCT
AATAGAGCCTCCATCTCCTGAGGAAAAGCTCAGGAGTAGGCAAAAAAGTG
AGATCAGTAGAGATTCAGTTCGAAAAAGAAGATCATCTATTGAATATGGG
AAAGAAAATGGCCAAGAGCAAGAAGATGAAGAGGAAAGTGAGCTTCAAAA
GATTCACAAAGGAATCAAACAAATTCGTAATTTCTTTGATGATTCTATGT
GTCataagattgaaaagaaaattgatcaaattgctGAAAAAGCTTTATGT
GgactttataaacaaaaaacttaTGATCGAGCACctttaagaaataaata
tttctttggTGAGGGTTATACATATGGAAAACAAATGGAGCATAAAGGTC
CAGGTCAAGAACGCCTCCACGTTAAAGGAGATGTTGATGAAATTCCCAAA
TGGATACAAAAGCATATCGTACAAAAAGTCTATGAAGAGAAGCTGGTTCC
TGATGGATGGATCAACAGTGCAGTTGTCAATGAGTATTTCCCTGGAGGTT
GTATTGTTTCCCATATTGATCCAATTCACATTTTTGATCGTCCAATCATA
TCCATCAGTTTCAACAGCAAGTCTTATCTATCATTTGGTGTCAAATTTTC
ATTCAATCCAATCCGTACTTCAGAACCAACACTGGCACTCCCTTTGGATA
GAGGAACACTAACAATGATCAGtggTTACGCAGCAGACAATGTTACACAC
TGTATTAGACCTCAAGATGTTGTTGAAAGAAGATGTGTCATTATATTGAG
AAgtggTTACGCAGCAGACAATGTTACACACTGTATTAGACCTCAAGATG
TTGTTGAAAGAAGATGTGTCATTATATTGAGAAgAGTGTTCCCTGATGCT
CCGAGAGTTGGTGATCCTGAACCAGAGTATCCTTTGCGAATGATGCATCG
AAGTCGAGCATTAACTTCTGGTGGTGATTTTTCATCAAGAAAACGACAAT
ATGGTGGAAACAATAGAGActattatcaaaataataataataacaagagA
AGGAAAACACGACATAGCTACTGAAGTGTTCCCTGATGCTCCGAGAGTTG
GTGATCCTGAACCAGAGTATCCTTTGCGAATGATGCATCGAAGTCGAGCA
TTAACTTCTGGTGGTGATTTTTCATCAAGAAAACGACAATATGGTGGAAA
CAATAGAGActattatcaaaataataataataacaagagAAGGAAAACAC
GACATAGCTACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000408_pilon | genome | sc0000408_pilon:26810..31866 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1144-1332:4869 |
| Aaloc | 1063-1140:4049 |
| Aaloc | 1-1059:1 |
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