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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000408_pilon:111354..114428+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015277 ID=XLOC_015277|Name=XLOC_015277|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3075bp|location=Sequence derived from alignment at sc0000408_pilon:111354..114428+ (Clytia hemisphaerica_ch_hm2_pilon)
tcaagcaaaaatagATTCTTGATAACCTTTTTGAATAAAAGGGAGCACGG
ACTCAAGAAAGAAGTTACAACGAAGATGGATTTCACTTTGGCCACTACCA
AGTGGAGATTtgaaactttaattttttggatttgtttCCTTCTACGTTAC
GTTCATGCTCGAGGTATGTGTTCAAATTCCCTTTTCCTGTTTTCTTATCA
CTACACGatctttctataagaacaaactatataagaacatgagtcattga
tggccaaaatattcaGAACAAATTAGGAACATTCTAAAACGcccgatttt
taggaaaatggaaaaaatactcacaaaatagcaAATAAAACGTGTAAGCT
TTGATACCACATGGTCGCCCATTCCAGATccgaaaaattgaatatgtgAG
CTGCTGTGTTTGTACTACAGAAAATGGcaaaactttctcattcccagCTA
ACCTTTCCTTTTGCGAGACTCtaggtaaatgaaaaagtaACTTAAATTAT
ATGTTAGACAGTTAGTTCTCAAAGCCGTAAAGTACTGTCACTAGCCGTAC
GtaacagaagaaagaagaaggcAACATCGGAAATATCCCACAGAAATACA
CCAGGAATGCTTCGCCGggaattaccttaagtggataaattttggcgtgg
atttaatttggcgatcgGCCATAATAcaatttttggcggggatttaattt
ggcgatcgatcaatttcgtaaaatttggccaggatttaatttggcgaatt
ggaaatttttgtcacactgaaatgggtgaaaattactcaaaaatatacta
aaaagttgcgattttctctttttgttaaagttggcggggatttaatttgg
cgaattgccgaatttgggaattttggcggggatttaatttggcgaatttt
gccaaaattcgccaaattcgccaaatgtaatccccgccaaaatttatcca
cttaaggtagaaACTTTAGCTATCATGCGGTAGTCTTGTGGCCCCAGTCC
TTTTCAAACACCTGAATGAACTAAGTCAAAATTTAACCCATGTGTTCTTT
GTTACCACACAACAACAGGTGCCAGTTTGAAGTGTTATTCGTGTGTAGCG
GACACCATTGAAGATTGCAATCGGACACAGTTTCTGGAATACTGTCCATA
CACTATTCTTTACCCATCATGCTTCACGGTCACTTACGAAAAGGTTTGTG
TTTTTTACCCAGTTgacacacaatgttgtttcaacgttcatctgacgtta
aatggacgttgtgaacattaaattgacgttgaaacaacgttgtgtgtcag
ctggatAACAATGTCAAAAATAGTTCACTGAATTAATTCACCTAAAAATT
CCAACAGCAATCAGGGAGCCTAAGCTTATCTATTTGAAAGTTaaatttaa
gcctaaaaatattccaGGCAGGCTCctgattaaaattattttatcaacaa
GTTTAGTTTAAGGATAGAAATACcctttttctaaaactctcttttcgacc
gtagtcgcgtgccactttattatttgatttaccaccctaaactcgatcca
atcctttttttacactttttctattgtctttaggtgcgaaaaaaagacag
GGAtagttttagggtggtaaaacggacaaaaaaatacccgcgCAGTAATT
GGCAGCTACGGTGGTCTATGATGCATAGACCTTATTGTAGCCTGcaacaa
aacttttgaagaattttgatgaTGCGTTGTAGAGTTTATAATGCAGGTTT
GTTTTCATGaccttaatattttttcaattttctcttACAATCAGGTGATT
CAAGCAGATGTGGAGGGAGAACAAAGTATACGAAAAGTTGTTCAAAAGAA
ATGCGGATCACAGTTGAATGGATGCCATTATGAATGTGGTCTTCACAAAA
TGTTAGGTGCAAGAAAGTGTTATGTAAGTGTCAGGAATCTTTATACACCC
CTTTGTCACGGACCCGATGGGAACTCTTTCACACTATGAAgattaaattt
ttatcaaaataccaatggggatagaaattctactgTTCTCAGATACTTaa
aaaaaCAAGCAGGGTTGATTTTGCAGAACAATTTGTTCCATTGAATTTCA
GATGGGGAAGAAAATCGTAAATATTTTCCGTTGGGACTGGAATTGTAGGG
TTCTTTTCTCACCGAAAATGAAActttggctaaattttccagtggagtGA
GGGTTCAAGCGGTCCTTTAACGCAGGGGTGTCTTTATGAATCCTAATTAC
CACTGTTTATATTATATTGACCAAAATGAAACCTGAAACcaagtcaaatt
aaatttaagGCACTTTGAAGTGCTTATCTATCAAGGATGATATTGGCTGG
AATTAGCATAGCGGAGTTTTCTTTAGAAAGGACGGGACATCCCTGGGGGA
GTACTAGGGTtgtgagctgacgggggggggtgccgcccgactttcgaccc
ttaccaggactaaaaaggagaaaacaaacgaaaatgttgtgaattttacg
acccttatcgggacaaatttgaccaattttgaccaaattccgatctttcc
gggggtaaaaagttgaaattttctccgaactttagtgggactgaaatttg
attttctgatttttccgacccttagtgggactttggagatccaaaaaagg
tactcttaaacccccccccccgagttTAAAGCCCTCAAGTGCTAAGGATG
ATATGTTTGGATGCTTAATGAAGCCGTTTTTCACCTGAAGTGTACGAACA
GCGCGTTTTTCACACAAAAgtcagattgaaagtaaaatctatcgccagga
ttttgaaaaatatgcagcGAAAAAACCAAGAAGGCGTcggattcaatctg
tcattccTATCATTTGACCTCTGATTATTCTGAAATTTTATCTTTCCCAT
CTTTCTCACATAGGCGACTTGTTGCCATAAGAACGAATGCAATATCAATA
CAGGGCGCCAGATTCGTATTTATAACAACCAATGGAATCATTCCAGAGTA
TCACGCGCCGATTTGCCAATAATTCTTGTTGTTGCAGCTTGTAGtatatt
tcttaataattatttatttatataa Coding sequence (CDS) from alignment at sc0000408_pilon:111354..114428+ >XLOC_015277 ID=XLOC_015277|Name=XLOC_015277|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1158bp|location=Sequence derived from alignment at sc0000408_pilon:111354..114428+ (Clytia hemisphaerica_ch_hm2_pilon)
tcaagcaaaaatagATTCTTGATAACCTTTTTGAATAAAAGGGAGCACGG
ACTCAAGAAAGAAGTTACAACGAAGATGGATTTCACTTTGGCCACTACCA
AGTGGAGATTtgaaactttaattttttggatttgtttCCTTCTACGTTAC
GTTCATGCTCGAGtcaagcaaaaatagATTCTTGATAACCTTTTTGAATA
AAAGGGAGCACGGACTCAAGAAAGAAGTTACAACGAAGATGGATTTCACT
TTGGCCACTACCAAGTGGAGATTtgaaactttaattttttggatttgttt
CCTTCTACGTTACGTTCATGCTCGAGGTGCCAGTTTGAAGTGTTATTCGT
GTGTAGCGGACACCATTGAAGATTGCAATCGGACACAGTTTCTGGAATAC
TGTCCATACACTATTCTTTACCCATCATGCTTCACGGTCACTTACGAAAA
GGTGCCAGTTTGAAGTGTTATTCGTGTGTAGCGGACACCATTGAAGATTG
CAATCGGACACAGTTTCTGGAATACTGTCCATACACTATTCTTTACCCAT
CATGCTTCACGGTCACTTACGAAAAGGTGATTCAAGCAGATGTGGAGGGA
GAACAAAGTATACGAAAAGTTGTTCAAAAGAAATGCGGATCACAGTTGAA
TGGATGCCATTATGAATGTGGTCTTCACAAAATGTTAGGTGCAAGAAAGT
GTTATGTGATTCAAGCAGATGTGGAGGGAGAACAAAGTATACGAAAAGTT
GTTCAAAAGAAATGCGGATCACAGTTGAATGGATGCCATTATGAATGTGG
TCTTCACAAAATGTTAGGTGCAAGAAAGTGTTATGCGACTTGTTGCCATA
AGAACGAATGCAATATCAATACAGGGCGCCAGATTCGTATTTATAACAAC
CAATGGAATCATTCCAGAGTATCACGCGCCGATTTGCCAATAATTCTTGT
TGTTGCAGCTTGTAGtatatttcttaataattatttatttatataaGCGA
CTTGTTGCCATAAGAACGAATGCAATATCAATACAGGGCGCCAGATTCGT
ATTTATAACAACCAATGGAATCATTCCAGAGTATCACGCGCCGATTTGCC
AATAATTCTTGTTGTTGCAGCTTGTAGtatatttcttaataattatttat
ttatataa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000408_pilon | genome | sc0000408_pilon:111354..114428 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 418-579:2914 |
| Aaloc | 289-417:1795 |
| Aaloc | 166-288:1071 |
| Aaloc | 1-162:1 |
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