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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000408_pilon:84840..90838- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015269 ID=XLOC_015269|Name=XLOC_015269|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5999bp|location=Sequence derived from alignment at sc0000408_pilon:84840..90838- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAAGTTTGGCGTTCCTTTTGGTTACCACCGTCATTGGTCAAATTTG
CGCAGGTATGTTGTTTATCTGATATTTCGATGGATGATTGGCGCACACCA
TGGCGTTCTAAATCTACAGGCCTAGCAAGCGTGCAATGTATCGCCTTCAA
ATATTTTCAGAAAATTGAGCCCCCGCAAATTCGAAGTCAAATTCGCTGCA
CGCTTGCAAGGCCTGCAGATTTAGAATGTCATGGCGCACGCCCACGCTAA
AGCTCTAAGGGAACAGGCAAATTTCCTATCGGAAAGTAATGATAGTCAGC
CTTTGATGTGCAGCATCTACAATCGGACTCGATGACCCTTGCACGTAGGC
CTGAAAATATTTTCGTTGGACCCGACAATCCCCGAAAACGTGGACTCGAT
CTTTGCTGCTCTTAGCGTCATTCAAGAAATTGCGTCGTTCTTCTGTCTCA
CTGTAGCCTGTAAATATAATGGAAATCCCAGAGGAAGCCAGGGAAACTTG
GGATAAGAGCCATTCGCAGTTGCACAGTACTTCTGCCTATGCTTACACAT
GTATGGCTTAATCTTTGAGACAGCATATGACTACTGGCAAAGTCAACCAG
GTATGCTTCAAAGTTTCTGAAAGACAGGCTTGTTAGCTCGATCATTTGGA
ATTAAATTTGAATTTTCGTTTTAGAACGATGTTTAGAAGACATTTGCAAG
TACAAGCAACCATGTATCACGCCAAACACAATCAGATGTGAAAAGCAGCC
ATTCTGGAGATACGAATGTGTCTGCAAGCCTGGTTTCTATGGTGTAAGAT
GTGAAACAGGTAAGTGCACTTCGAAAGAGTGGACAATTTTTTTATTTTCC
TATTCGTCTTTCCTATCTCGTCGTCTGTTTTCAAATTTTTTATTTTCTTC
TACGTCAATTTTCTTATTCGTAAAAAGTACTTGATCTCATTCCTTTTTCA
TTCGTCGTCATTTTCTCCATAGTACCTTTTTTCCTTTTAATAACTCTTTC
TTTTTTTTGCTTTCGTTCTCGTCTTCCTATTTTATGTAAGCTGACCTCAA
TCTCGTACCCAGGGTCACTCCCACCACTTTTTAATTTTACCCTGATAGAT
CGTGAGCACTATTATAAAAAAGCGTCAAGGGGCAAATTTCAGCTGACATC
TTTATATTTGCTCGACATCACTTGTTTTTCTCTGCATTTATATAGTTTTT
TAAGTCGATTTTGATTTTTTTGCATACTTCTCCATAGTTACTTTCATCAT
TCATACTCGATCTTTCCCATGTCTTCTTCCAAACCTGTCAACTCTCTCTA
ATTCGAACCTCTACTATCCATTTCTTACAATATTTCGAACTAAAATGGGC
TGTTTCATTAAAAATCCATAAAGGGGAGTGGACTAACCTTTTCACGTCAA
AAATAAAATCTTTGAAATGTGTGAATACCCCTGGAAAATGGCAAAATTTT
CTGAAAAACTCCTTTGAAGTGAGGGTGGACGAAGTAAATCAGTCTGAAAC
CCCCTGGAAGTTTTAAGACAAGTTCTTACACCCTGGAAAAATGAAAAACC
ACTCCTTTAGACCCCCTGGAAATTTTCGTCCACCCCCCCCCCCCACTCTA
TTTTATGTATATAAAATGGAATGGTCCAATATTGGTTCCCTCAGCTGAAA
ATAGTATAGAATATTTTTGAATATTCGAATCTTTCTCTTATTCGAAAACA
ATTCTTGGTCCCTTGAAAATCGAGCTAGCGAAAGTCAACTATTCTAAACA
TTTTCTTTATTTTTCTTTTGGCGTCTTAATCACTGAAGGTTATGTTATTT
CCAGGTGTTATTGGGCTTTTCCAGAAAATTTTTTATTAACCCCACTGTTG
AGGATATTGATTTTTCGAAGTATCGAACCCCATGGATATCCTACTTAATT
AGTAAAGACCCCCTGGATATCCACTCTTAAAGATATGCTTAACCCCTGGA
TATCCTCTCTTATAAAGATGCTTACCCCTGGATATCGTATTTTTTTACTT
GAAAAGACACTTTACCCCCTGGATATCCGCTCCCTTGTAGATATTTAACC
CCCTGGTTATCCACTTTTGAACGAAAGTCGTTAACCCCTGGATATCCGAT
ATCCTCAACAGGGGAGACACGGACTATTTCTGGAAAAGCCCATTTCCCTA
TTGTCGCTTTTTTTCTTATGTTTCAATTGGTTTATGGAATACTGCTTTCT
AATTGTAGAGTTTATATTTCATGAGATATTTTTCTCTCCGTCTATTTATC
CTTGCCTTCGGTTTCGTCCTCAACTTCTAGGTCTTCTTCTTTATTTTATT
TCTCCCTATTATAATCTTCAACTTTGGACTGAACTTTGGCTAACTGAACA
AAAATATCCTGTTTCTTGTTTTGTGGGAATACGTTCCACAGTTTTTACTA
CTCTTATGGTTTTGTTAATAGATCGCTAAGTTCGAACGTTTTTTTTATTT
ATCAGAATCTGGCAACTGCAAAAACATCAAATGTCCAAGTGGAACCAACT
GTAATGCTGGAACTGAAAAATACATTTGCCAGTGTAAGAAAGGCTTTACT
GGTGAATTCTGCCAAAACAACATTGATGATTGCAAAGGAGTTCGCTGTCA
AAACGGAGGAACCTGCAAAGATGGAATCGCCTCTTTCACTTGTCAATGCA
GAAACGGATTCAATGGAGAATTCTGCCAAAACAACATTGATGATTGCCAA
GGTGTCAAATGCCTCAATGGAGGAACCTGCAAAGATGGCATTGCTTCTTT
TAGCTGTAAATGCAAAACTGGATTCACAGGAAAATTTTGCCGAACAAATA
TTGATGATTGCAAAGGAATTAGATGCCAAAACGGAGGAATCTGCAAAGAT
GGAATCGCCTCTTTCACCTGCCAATGTAAACGAGGATTCAATGGAAAATT
ATGTCAATTCAACATTGATGATTGTCAAGGTGTTACTTGCCGAAACGGTG
GAGCCTGCAAAGATGGAATCAACGCATTCACTTGTCAATGTAGATCTGGA
TTCTATGGACGATTTTGTGAAAATAAAGATTTCTGCAGAGGTGTCAGATG
TCAAAATGGAGGAACCTGCAAAGAGGGAGTCGCTTCTTTCACTTGTCAAT
GCAAAAACGGATACAATGGAAAATTCTGCGAAAACAACATTGATGATTGC
CAAGGTGTCAGATGTCACAATGGAGGAACCTGCAAAGATGGAATCAACGC
ATTCACTTGTCAATGTAGATCTGGTTTCTATGGGCGACTCTGTCAAAATA
GAGATTTCTGCAGAGGTGTCACCTGTCGAAACGGAGGTACATGCAGGAAT
GGGTTGACCTCCTTTTTCTGTGAATGTAAAACCGGGTTCAATGGAAGAGT
CTGTGAAAACAACATTGATGATTGCCGAGTTATTACTTGTCAAAATGGAG
GAACCTGCGAAGATGGAATCGCCTCTTTCAACTGTAAATGTAAATCTGGA
TTTACAGGAAAATTTTGCCAAACAAATATTGACGAGTGTGAAGGAGTCAG
ATGCCAAAATGGAGGAATCTGCAAAGATGGCATCAACACATTCACTTGCC
AATGTAAATATGGTTTCTCTGGAAAATTCTGTCAAACTCGGAAGGATGTT
TGCAAAGATAACCGTTGTTTAAATGGAGCAACCTGTACCGACACTGTCGA
CTCTTTTAAATGCATTTGCAGCAAAGGTTTTACAGGAAGGTTTTGCCAGA
CAAACATCGATGATTGTCAAAGTGTCACTTGTCAAAACGGGGGAACTTGC
AAAGATGGAACTGCTTCTTTCACTTGTGAATGTAAAAATGATTTTTTCGG
GAGATTTTGTCAATTTAAAAGGAATTTTTGTGATGGCGTAACTTGTCAAA
ATGGAGGAACCTGCACAGACGGAATTGATACTTTCACATGTCAATGCAAA
CGTGGATTCAATGGAAAGTTCTGTCAAAACAACATTGATGATTGTCAAGG
TGTTACTTGCCAGAATGGAGGAACCTGCGAAGACGGAATTGCTTCTTTCA
TTTGTCAATGCAAAAACGGATTCAACAGAAAATTCTGCCAAAATAACATT
GATGATTGCCGAGGTGTTACTTGCCAAAATGGAGGAACTTGCGAAGATGG
AATTGCTTCCTTCACTTGCAAATGCAAGAATGGATTCAATGGAAAATTCT
GTCAAAATAACATTGATGATTGCCGAGGTGTTAATTGCCAAAATGGAGGA
ACCTGCAAAGATGGAATCGCTTCTTTCACTTGTCAATGCAAGCCTGGATT
CTCTGGAAAGTTCTGCGAAAGTAAGTCATTATATTTCATACTGAATTTAC
TGATCCATAAACCTTTAACTAGGGTTACTTTTCACTTCCCATGATTGTGT
TTCTTCTTGAAACGATAGAGTCATCACAGGCTATAGTGAAAGTTTAAGCT
CTCTATAGAAGGGGGGACTCGACTTTTGAGGGTCATTTTTTCATTTGCAT
TCTGTCAGTTTTGGACCGGAGGAATCGGTTTTATGTAACAACAGCCATAT
AAACGTTTCAATTTAGTTATAGACTCGCCCTAATGATTGTGGAAATTGGT
GCAAATTAAGACTTTGATATCTTGATACGAGGGGCTTCCAAGAATCCAGT
ATTGAAGATATTCTGATATTGAGAGGGTTGGGAGGCCGAATTTCTGGAAT
TTGGGTACTCGTTGAAACTTTTTTAAGCTGGTATTTGGGAAATTTTGGCC
TAATTTTTGGCCGTCGCTGGTATTTCATAAAAAAATGGCGGTATCCCTGT
ATTTTGAAACGTTGGAAGCCCCTCCCCAATTGATAAATGTGTGGTGTGAC
TCAACTTTACAAGTTAATCCCATAGAGGTTTTTCATGTTTTATTAAATTA
CGTAATTTTCGCCATTATGGAAGCAAACGTTCGAATCTGTAGAGGTGATC
CCTTACGTAAATCGAACGTTTGCTTCCATAATGGCGAAAGTTAAAACAAA
ATAAAACAAAATAAAACATGAAAAAACCTCCATATCTCAATAAGTAGGTA
TTGTGTATTGTGCATCAAATTTACATTCTTTTTGTTTTAGTTTCTTCATG
TTCTCCGAATCCATGTCAAAATAATGCGAAATGTATGGAGCATGGTGGAG
CTTTCAGTTGTTGGTGTAATCAAGGATATGAAGGAAAATTATGTGAAATC
AATGTTAAAAGTAGGTCGTTTTTTAACACAAAAAGAACATAATTCACGCT
TTTTTATAAGAACGCCCAAAATTTTCGAAACCTTTAGAAGTTCTTAACTC
TTGGAGTTTTCAGTCTAGAAAATGTTTCTAATTTTACTTTTTTGAATTTT
TGTTTCCTAAAAATTCGGTGTTATAGAGTCTGCGAAACCTTAAAATGTTT
TAAATTTGTTAATGATGTTTCTATCATCGAATCTTCGTGTTCTTTTGAAA
AGGAACGTGTGGTCCAGAATAATAGGTATCAGAGTCCAAACATCCAAAAC
AGGTGGAATACGGTTTCTCTACTTCTATTTTATATACCTTATCGGCCAAA
ACTTAGTTGTCCTTAATTCTAGTCGGCCTTAATTATTAGTAGGCCCTAAT
TTTATCACCTCGTCACCTCATTCAGTCAACTAAGAGCCGACTAATAATTA
AGACCGGACTAAAAATTTGGGCCATTTCTAAATTTACAAGCAGATGGAAA
ATAGGAGAAAGCTTAAAATACTGGAAAATAAGGAAAGCTTAATTATTAAC
TTTTAATTTGGCCCAATCTTTTAGTCCGCCCTAATTTTAGTCACCAAGCC
AATATTTAGTCACTTAGGGCCGACTAAGTTTTGGCCAATAATGTATAAGA
TTTGAAGATTAAAGGTGCTTAACGACTATACTATTTTTTCATTTTATCAG
AATGCAACTACCACTGTAGCAGCTGGCGTGGATATTGCCGTATCATGGCA
ACCGACGGCCGTATCTATAGCAACCATTGTCAATTCGAGCGTGCGCAATG
CAGAAACAATTCACTAAGAATCAGGAAGAAAATCTGTGGCTTTTATTGA Coding sequence (CDS) from alignment at sc0000408_pilon:84840..90838- >XLOC_015269 ID=XLOC_015269|Name=XLOC_015269|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4548bp|location=Sequence derived from alignment at sc0000408_pilon:84840..90838- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAAGTTTGGCGTTCCTTTTGGTTACCACCGTCATTGGTCAAATTTG
CGCAGATGAGAAGTTTGGCGTTCCTTTTGGTTACCACCGTCATTGGTCAA
ATTTGCGCAGAACGATGTTTAGAAGACATTTGCAAGTACAAGCAACCATG
TATCACGCCAAACACAATCAGATGTGAAAAGCAGCCATTCTGGAGATACG
AATGTGTCTGCAAGCCTGGTTTCTATGGTGTAAGATGTGAAACAGAACGA
TGTTTAGAAGACATTTGCAAGTACAAGCAACCATGTATCACGCCAAACAC
AATCAGATGTGAAAAGCAGCCATTCTGGAGATACGAATGTGTCTGCAAGC
CTGGTTTCTATGGTGTAAGATGTGAAACAGAATCTGGCAACTGCAAAAAC
ATCAAATGTCCAAGTGGAACCAACTGTAATGCTGGAACTGAAAAATACAT
TTGCCAGTGTAAGAAAGGCTTTACTGGTGAATTCTGCCAAAACAACATTG
ATGATTGCAAAGGAGTTCGCTGTCAAAACGGAGGAACCTGCAAAGATGGA
ATCGCCTCTTTCACTTGTCAATGCAGAAACGGATTCAATGGAGAATTCTG
CCAAAACAACATTGATGATTGCCAAGGTGTCAAATGCCTCAATGGAGGAA
CCTGCAAAGATGGCATTGCTTCTTTTAGCTGTAAATGCAAAACTGGATTC
ACAGGAAAATTTTGCCGAACAAATATTGATGATTGCAAAGGAATTAGATG
CCAAAACGGAGGAATCTGCAAAGATGGAATCGCCTCTTTCACCTGCCAAT
GTAAACGAGGATTCAATGGAAAATTATGTCAATTCAACATTGATGATTGT
CAAGGTGTTACTTGCCGAAACGGTGGAGCCTGCAAAGATGGAATCAACGC
ATTCACTTGTCAATGTAGATCTGGATTCTATGGACGATTTTGTGAAAATA
AAGATTTCTGCAGAGGTGTCAGATGTCAAAATGGAGGAACCTGCAAAGAG
GGAGTCGCTTCTTTCACTTGTCAATGCAAAAACGGATACAATGGAAAATT
CTGCGAAAACAACATTGATGATTGCCAAGGTGTCAGATGTCACAATGGAG
GAACCTGCAAAGATGGAATCAACGCATTCACTTGTCAATGTAGATCTGGT
TTCTATGGGCGACTCTGTCAAAATAGAGATTTCTGCAGAGGTGTCACCTG
TCGAAACGGAGGTACATGCAGGAATGGGTTGACCTCCTTTTTCTGTGAAT
GTAAAACCGGGTTCAATGGAAGAGTCTGTGAAAACAACATTGATGATTGC
CGAGTTATTACTTGTCAAAATGGAGGAACCTGCGAAGATGGAATCGCCTC
TTTCAACTGTAAATGTAAATCTGGATTTACAGGAAAATTTTGCCAAACAA
ATATTGACGAGTGTGAAGGAGTCAGATGCCAAAATGGAGGAATCTGCAAA
GATGGCATCAACACATTCACTTGCCAATGTAAATATGGTTTCTCTGGAAA
ATTCTGTCAAACTCGGAAGGATGTTTGCAAAGATAACCGTTGTTTAAATG
GAGCAACCTGTACCGACACTGTCGACTCTTTTAAATGCATTTGCAGCAAA
GGTTTTACAGGAAGGTTTTGCCAGACAAACATCGATGATTGTCAAAGTGT
CACTTGTCAAAACGGGGGAACTTGCAAAGATGGAACTGCTTCTTTCACTT
GTGAATGTAAAAATGATTTTTTCGGGAGATTTTGTCAATTTAAAAGGAAT
TTTTGTGATGGCGTAACTTGTCAAAATGGAGGAACCTGCACAGACGGAAT
TGATACTTTCACATGTCAATGCAAACGTGGATTCAATGGAAAGTTCTGTC
AAAACAACATTGATGATTGTCAAGGTGTTACTTGCCAGAATGGAGGAACC
TGCGAAGACGGAATTGCTTCTTTCATTTGTCAATGCAAAAACGGATTCAA
CAGAAAATTCTGCCAAAATAACATTGATGATTGCCGAGGTGTTACTTGCC
AAAATGGAGGAACTTGCGAAGATGGAATTGCTTCCTTCACTTGCAAATGC
AAGAATGGATTCAATGGAAAATTCTGTCAAAATAACATTGATGATTGCCG
AGGTGTTAATTGCCAAAATGGAGGAACCTGCAAAGATGGAATCGCTTCTT
TCACTTGTCAATGCAAGCCTGGATTCTCTGGAAAGTTCTGCGAAAAATCT
GGCAACTGCAAAAACATCAAATGTCCAAGTGGAACCAACTGTAATGCTGG
AACTGAAAAATACATTTGCCAGTGTAAGAAAGGCTTTACTGGTGAATTCT
GCCAAAACAACATTGATGATTGCAAAGGAGTTCGCTGTCAAAACGGAGGA
ACCTGCAAAGATGGAATCGCCTCTTTCACTTGTCAATGCAGAAACGGATT
CAATGGAGAATTCTGCCAAAACAACATTGATGATTGCCAAGGTGTCAAAT
GCCTCAATGGAGGAACCTGCAAAGATGGCATTGCTTCTTTTAGCTGTAAA
TGCAAAACTGGATTCACAGGAAAATTTTGCCGAACAAATATTGATGATTG
CAAAGGAATTAGATGCCAAAACGGAGGAATCTGCAAAGATGGAATCGCCT
CTTTCACCTGCCAATGTAAACGAGGATTCAATGGAAAATTATGTCAATTC
AACATTGATGATTGTCAAGGTGTTACTTGCCGAAACGGTGGAGCCTGCAA
AGATGGAATCAACGCATTCACTTGTCAATGTAGATCTGGATTCTATGGAC
GATTTTGTGAAAATAAAGATTTCTGCAGAGGTGTCAGATGTCAAAATGGA
GGAACCTGCAAAGAGGGAGTCGCTTCTTTCACTTGTCAATGCAAAAACGG
ATACAATGGAAAATTCTGCGAAAACAACATTGATGATTGCCAAGGTGTCA
GATGTCACAATGGAGGAACCTGCAAAGATGGAATCAACGCATTCACTTGT
CAATGTAGATCTGGTTTCTATGGGCGACTCTGTCAAAATAGAGATTTCTG
CAGAGGTGTCACCTGTCGAAACGGAGGTACATGCAGGAATGGGTTGACCT
CCTTTTTCTGTGAATGTAAAACCGGGTTCAATGGAAGAGTCTGTGAAAAC
AACATTGATGATTGCCGAGTTATTACTTGTCAAAATGGAGGAACCTGCGA
AGATGGAATCGCCTCTTTCAACTGTAAATGTAAATCTGGATTTACAGGAA
AATTTTGCCAAACAAATATTGACGAGTGTGAAGGAGTCAGATGCCAAAAT
GGAGGAATCTGCAAAGATGGCATCAACACATTCACTTGCCAATGTAAATA
TGGTTTCTCTGGAAAATTCTGTCAAACTCGGAAGGATGTTTGCAAAGATA
ACCGTTGTTTAAATGGAGCAACCTGTACCGACACTGTCGACTCTTTTAAA
TGCATTTGCAGCAAAGGTTTTACAGGAAGGTTTTGCCAGACAAACATCGA
TGATTGTCAAAGTGTCACTTGTCAAAACGGGGGAACTTGCAAAGATGGAA
CTGCTTCTTTCACTTGTGAATGTAAAAATGATTTTTTCGGGAGATTTTGT
CAATTTAAAAGGAATTTTTGTGATGGCGTAACTTGTCAAAATGGAGGAAC
CTGCACAGACGGAATTGATACTTTCACATGTCAATGCAAACGTGGATTCA
ATGGAAAGTTCTGTCAAAACAACATTGATGATTGTCAAGGTGTTACTTGC
CAGAATGGAGGAACCTGCGAAGACGGAATTGCTTCTTTCATTTGTCAATG
CAAAAACGGATTCAACAGAAAATTCTGCCAAAATAACATTGATGATTGCC
GAGGTGTTACTTGCCAAAATGGAGGAACTTGCGAAGATGGAATTGCTTCC
TTCACTTGCAAATGCAAGAATGGATTCAATGGAAAATTCTGTCAAAATAA
CATTGATGATTGCCGAGGTGTTAATTGCCAAAATGGAGGAACCTGCAAAG
ATGGAATCGCTTCTTTCACTTGTCAATGCAAGCCTGGATTCTCTGGAAAG
TTCTGCGAAATTTCTTCATGTTCTCCGAATCCATGTCAAAATAATGCGAA
ATGTATGGAGCATGGTGGAGCTTTCAGTTGTTGGTGTAATCAAGGATATG
AAGGAAAATTATGTGAAATCAATGTTAAAATTTCTTCATGTTCTCCGAAT
CCATGTCAAAATAATGCGAAATGTATGGAGCATGGTGGAGCTTTCAGTTG
TTGGTGTAATCAAGGATATGAAGGAAAATTATGTGAAATCAATGTTAAAA
AATGCAACTACCACTGTAGCAGCTGGCGTGGATATTGCCGTATCATGGCA
ACCGACGGCCGTATCTATAGCAACCATTGTCAATTCGAGCGTGCGCAATG
CAGAAACAATTCACTAAGAATCAGGAAGAAAATCTGTGGCTTTTATTGAA
ATGCAACTACCACTGTAGCAGCTGGCGTGGATATTGCCGTATCATGGCAA
CCGACGGCCGTATCTATAGCAACCATTGTCAATTCGAGCGTGCGCAATGC
AGAAACAATTCACTAAGAATCAGGAAGAAAATCTGTGGCTTTTATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000408_pilon | genome | sc0000408_pilon:84840..90838 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 2128-2274:148 |
| Aaloc | 2008-2124:958 |
| Aaloc | 193-2004:3543 |
| Aaloc | 58-189:5324 |
| Aaloc | 1-54:6000 |
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