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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000337_pilon:259196..264984+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015227 ID=XLOC_015227|Name=XLOC_015227|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5789bp|location=Sequence derived from alignment at sc0000337_pilon:259196..264984+ (Clytia hemisphaerica_ch_hm2_pilon)
GTCACCAGCATGCCTGAAACTAGATGCggcatattttcatttttcattat
tcattatttttccattACAGGCTCTACAGCAACAAATCCACACTGTACAA
ACACCACCACACCACAGACGATCAACCTATTGAAAACATCTTCTCGGGTA
TGTATTGCGCATGTGCAGTTACAGAAATTGAAGTATCCGTGACCGGAAAA
AGAATCGATTCCAGAGGCCGCGGCGGTAAAATAGACTTACGCGGACATTt
ggatttcaatttcattttagtgTAGAGCGGGTTTAATTTTTTGTAGTGTG
ATGTATACGGGGACTAAAGTCCCGATCGAACAGAAGCTATGACGCACGCG
CaggaaaatgttatttttcgcACTTTAGGCGACAATGATGATAGCTGTAG
GAGATGGAGTTCAATTTTCAGGTTTGTCtgtgaaataatgaaattttctt
atATAATGAAATTTTTACGCGGCTACACAAAACACACGCGGACGGGTGAC
GCTAAACTGGTATGTCAATTCCCTCGGccttacgttcgattgtattcgat
tatgttcgagtaCGTtcgatttttagattttattcactttcgtacgatac
ttaaataagcgctcggccgcccacgctaaaaagctctaacagagtgatcc
aatttaatttaatcgcaatcaaactcatcgaacataatcgtaatcgaacc
aatggaacGTAGTCAACtgttaatcgaaccaatctaaccttactcagtcg
aggattatgccctaaataagagaatacccaagttagaggattaccttatt
taggagattttcagtCTCTTATTTAAGAGAACGTTACCTAAACTAGGAGA
ATCCTGCACGTTTCACAAATTTACTTCAGAGCAGACTATTTGCGCAATGT
GAAAATAAGATCACGTGAAAGATCACGTTTCCGCGATTCCGatgacccaa
aaaccaaaataaaataccttttcattctttttcaaacttcgaaaaaccat
aaATATCCTCATTTGCATGTGTTGACGTAAATTTTTAATAATGAAGAAAC
ACCCTCGACCTTCAAAACGCGTTTTTTCTCAAACTCCCTTATTTAGGAGA
GACAAGAGCGACTCACTTTCTGTTTGACCCGCGTTTTGACCGCGCTTAAA
CGCGTTTCTTAAATATGGCCCGatctatattattacttttcacgaaattc
tcatgatgtagatcggcctttagattgatagaccctaaccatcctaggtc
cacgaaacaaaagcagaactcaaccaaattttgctagaagggagaaaaaa
acgtactgagtcgatctatgaagttcaaaacttgcgcaaaatgatgagaa
ggccaaaaattagcgaagaaagaaaagtctcctagttaagagaaagaaat
ctcctatataagagaccttctcttaaatagagtatatctcttatttaggg
cataatcctcgactgtTACTAactcgaatgcaatcgaatacaatcgaata
ttacctagaaatcagccgttcgattgagattcgattacgttcaacaatcg
aatcgcaattattcgatcgcgttcaattacgtttgattggttcgattgcg
atttttgtttgaagttgtttgattgacaccgtctggaaatTTTGGTCCAG
ACAAGGTGGGTGGGGTGGAGATCTCAAGCAAAATAAATATAGCCAAACAA
CAAAAGTCTGAGCACAATGCAACGAAGGGTAATTACAGTAAGATTTTAAA
TATACCTTTATAAAGTCCTATTTATTAAGAGTGTAGATACAAAGGAGGTG
AATTGATGTAACTGTGTGGTGTGTAATGTGAGTGAAGTGGAAGTGGAAGC
AATTGCATTCTCGCGTGAGTCTGAACCCACATTCAAAAGTATATAGTAAT
GAACATAAGTTGCTGGAATGGATAACGGTGCATCAATAAATCGCCATCAG
AACGCCAACTCCAAAATCATTGGCGTATCTTATCAAATCTGGGCGTCCTG
AAGGCGGAAGCTTTACGCCGGGGCGCGCGGGAGGTTAAAATTCCCGCTTG
AAGAAGATAGAGACTTTTGAACTGAATGTGAGTAAAGCTTTTTGATTATT
TCGGTTATTCTGAATGATATCTAACAGAgaggattttgatttttcaatca
aaattttaaggtTATTATGTTGCGCGCCAAAgccttcttttttataaaat
tagaaTATTGTATCAAAATGCAATATTAAAAGAGCAAAAAAGCTCGTAGT
CACCTAAGCAATACGTTTATTGATATTTCAACGATAAAGAAGAAGACAGA
ATGGCAAGTATTGAAGAAGGTCAAGAGGTTAGTTTCGTTAGATTTTATTC
CATAAATTCTCAAATAACTACTGGGTTTATtatagacgtcacccgcgttt
tttttacgcaattaacgtgtATTCCACTTtgtgactttttcgaatgtttg
gaacCCACCAGGTTTTTGGGTTAGAGcccgattttttgacgtcatttaAT
ATTTCAAGGCTccttcatttgaaaaaaatcaaattttcgtcaatacactt
ctttttttttcgaaatattcgtcaaagtggaactcaccaagaaacggaat
gaaaaatctcggtttttggtgaggtgctcgctacagGGTTAAAGCAGGAT
ATGCATTTTTCATAAAtccatttagtatagtaagataacGCTAATATTAC
ATCCTGATGCTTACGATGAACATTATCTACGTcgtttttaaataactttt
ctaCGTCGTTTTGCGCCATTTTAATTCACAACTTACAGTCAACGTACTGG
CGAcctaattttgtgatttgacgaTTTGACAACGACGTACTTATATTTCC
ACGTTGGGAGCAATCACCTTGTGAATGTTCATTTGGTTTGTATTGTGTCT
AATCTCTTTCTAAACTCCATTCGTGTGCACTTTTCtgatacacgggttgc
aaaattatatcaatgccaATGCAATCAAAACATGTGCTTAGCTTACTCAA
AAAGGTTCACGTggttttattcccatgttacttgctttacaacttacagc
tgatacagctttattagtgtcaaccaatcagaaattaatgtcatgtaaca
agcacataaaaatttcgagtaaatgCGTGATTTATcgtcagactttaatt
ttgcaacctgtgatAACCATGTCAGGGTAATTAGACTAAGACTGGTTTCC
ACACGGTGGCAAGAAAGATGCACACTTAAAGTGAATAGACCTTAATTACA
TACCACCTGGCTTATAGGAAAAAGAGTCTACACCATTACTACAGagcgaa
gaagaagaaacaCCGAAGGATTTAGAAAAAAGCAAAGGTAAGTGGAATAC
GAAGTATTCTGAATTTcctgaaaaagaacaaaatcaaTATATTTGGCCAA
GTGATAGTATGTATATACATAAGTTAAAAGCGAATAATAAAAGGCAAACC
AATCTGAAAAGTATCACAAATCCACATCGAAAGAATGGTGGCATAACCTT
GCGGTCACGCCGGGTGCACTAAAGGGCTAATGATAAGAGTGTGAAAAGAA
TCTCAAAAGGTAcgaatctaaagaaaaattgacTAACAATTTCTCTTGGT
AGTTTCATGAATTTCAATCTCATTCATATCAACGTTCATTTCGAACAGTT
CTCGAGCCACGTAAGCATAGGATAGCTGAACGTACCGAGCAAAACGAGGG
TTTAGTTCTCAACCAATTCAGCATTGTACAAAATTGAAATGTCTTTTTTG
TATGAGAAAGTTCCTGAAGGTGCGGATGAATCGAATTATTGACAAACTTC
ATGATTATAATGGATGTCTTGCTTTCCAGTCTTGTAACCAGAGCTACTtg
taccactttttgattttaccgATGAAACGTTTGAGCGCAGTTTTGAGCGA
TGCTTTATATCAGAAGCAAGCAAAGAGGCTAATTTTGATCGAGTTCGATA
CTTTGTAATCTTTCAATTATATGATGATTAAGATTTCCGTTATTTTTCAG
GCGATGGAGTGGTTGGTGAAGGGTCTGTGCAAGAAAATGGCACTACAACT
AATGGTAACGAAaggtatttattttgaaaagtatGATTCACTTGCACTGA
ACTAGTGCCAACTATGAATTTCAAGGTAGGTGGGAAACACATCTGATGTG
ATAGAATCTAATAATACTAAAATGTCATTTTACTACCAAATTTTTGTTAG
ATTTATATTCGGCTTCTCTATAATTCTAGATCAACGACAAACGAAGATTC
TTCACCGGCGGCATCACCTCCATCTTATGAGAGCTTGTTCGGTAAAATGA
AAGACTGTACTGGTGAAACACTCAACGCATTCGACTTCATGCACGATAGC
GCTAATATTCTACTACAAACTAGTGAGCTCTTTTGTAATATCGGTCCTTC
CAAATCCTTTCCTGAAAAACGATCTTTCAATCTAACGGGCGCAAAATtgg
ctggattttttttaaacaaaagcgTTTTCGTCAACTTAAAAAGGCATATT
CGGAATTTGACCCCTTGTTTTATATATGTGTGCTAGGAAGGGAAGGCTCC
CTAAATAGGGGTCGAGTTCAGGGTTTTAAGGTGTTTCTAATGGGAAAATG
ATGTAATTTTGACCACATTTATATACAATCAATGTCGCTCCCAACATGCT
TGAATGATACTTCTAATCTTTTTCATGTCAGATTTGTGTATGATTGTCAT
GTTGGTTATGCTGGCTCTTCCAATCGCCTCTATTGTCCTTGGTAAATATG
TTGTTTCAATTCTTTACTATCGCATCTAAAGAGATTGTATGTACACAAAC
tcagtatctacggcttatttcgaaattcattgtactgtactacgaagcga
taaacagTGAAATaaactctggtacagagtactaAAGAGAGTGATATTCA
TCAGTGCGTCCGGAAAAAGCGGACAGATGTCAGATGTCATACattgaaaa
tcctgatttttatgaattttacgaCGTAGTCGGTCAATTTGTTCTTCAAA
GATTTTATAATATTGTCTATAGAAATATGAATAGGTTTTGGCTGAACAAA
CAAATTCCTGTATACTTCAATTCTTTTGAACtcaaaaacctcaaaaatct
TTTCGGGCACACGGCAATTTAGTCATTCCTTTGCCTTGTCGATTTGGTCA
GGACGAACGTAAAAGTAATAGAGAGGGTACCAACTACTAGACATTGGTAA
TCTTTTGTCTTTTGTTTATCTTGAGAATTCTTACTGAGAGTCTAAATTTG
ATTCAAGTGGGATAAAagtaaaacaaatttttccaCCAAATCTGACATAA
TTAAGCAGTAAATATCTTTTCCCCATAGCGGTAACCATAGATCGATTGCA
TTTAATATTCTCAATCCTTTCTATTGTAGGCTCACTATACATTGATCAAT
GtccaaaaaaacattacataCCGATTTACTTAATTGTTGTTGGATCATTT
TCCATCTTCCAACAACTTCTCAATATTTGTACACGATTTACAAGACGTAA
CGACAACGATTCTGGTCAACGTCATTTATCGTGCGATTGTTATCGGTGTT
GTCGAAGTGTTATCAATCTTTTTGTATTCATGTGGTTTATTGCTGGAAAC
GTATGGATTTATTCAGCATATGAGCCAAATTATACGGACCGGTCAAGTCC
CGATTTTTGCCATAAGACATTGTACTTATTTGCCTTTTGGATGACAACAT
CTGTTTATATCGTATTAGCATTATCGTGTTGCTGTATTGGTTGTTTCGCA
TGTGGCTCAGCCTGTTGTACCGTTTTTCGCGAAGAGTAG Coding sequence (CDS) from alignment at sc0000337_pilon:259196..264984+ >XLOC_015227 ID=XLOC_015227|Name=XLOC_015227|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1788bp|location=Sequence derived from alignment at sc0000337_pilon:259196..264984+ (Clytia hemisphaerica_ch_hm2_pilon)
GTCACCAGCATGCCTGAAACTAGATGCggcatattttcatttttcattat
tcattatttttccattACAGGCTCTACAGCAACAAATCCACACTGTACAA
ACACCACCACACCACAGACGATCAACCTATTGAAAACATCTTCTCGGGTC
ACCAGCATGCCTGAAACTAGATGCggcatattttcatttttcattattca
ttatttttccattACAGGCTCTACAGCAACAAATCCACACTGTACAAACA
CCACCACACCACAGACGATCAACCTATTGAAAACATCTTCTCGGGAAAAA
GAGTCTACACCATTACTACAGagcgaagaagaagaaacaCCGAAGGATTT
AGAAAAAAGCAAAGGAAAAAGAGTCTACACCATTACTACAGagcgaagaa
gaagaaacaCCGAAGGATTTAGAAAAAAGCAAAGGCGATGGAGTGGTTGG
TGAAGGGTCTGTGCAAGAAAATGGCACTACAACTAATGGTAACGAAagGC
GATGGAGTGGTTGGTGAAGGGTCTGTGCAAGAAAATGGCACTACAACTAA
TGGTAACGAAagATCAACGACAAACGAAGATTCTTCACCGGCGGCATCAC
CTCCATCTTATGAGAGCTTGTTCGGTAAAATGAAAGACTGTACTGGTGAA
ACACTCAACGCATTCGACTTCATGCACGATAGCGCTAATATTCTACTACA
AACTAATCAACGACAAACGAAGATTCTTCACCGGCGGCATCACCTCCATC
TTATGAGAGCTTGTTCGGTAAAATGAAAGACTGTACTGGTGAAACACTCA
ACGCATTCGACTTCATGCACGATAGCGCTAATATTCTACTACAAACTAAT
TTGTGTATGATTGTCATGTTGGTTATGCTGGCTCTTCCAATCGCCTCTAT
TGTCCTTGATTTGTGTATGATTGTCATGTTGGTTATGCTGGCTCTTCCAA
TCGCCTCTATTGTCCTTGGCTCACTATACATTGATCAATGtccaaaaaaa
cattacataCCGATTTACTTAATTGTTGTTGGATCATTTTCCATCTTCCA
ACAACTTCTCAATATTTGTACACGATTTACAAGACGTAACGACAACGATT
CTGGTCAACGTCATTTATCGTGCGATTGTTATCGGTGTTGTCGAAGTGTT
ATCAATCTTTTTGTATTCATGTGGTTTATTGCTGGAAACGTATGGATTTA
TTCAGCATATGAGCCAAATTATACGGACCGGTCAAGTCCCGATTTTTGCC
ATAAGACATTGTACTTATTTGCCTTTTGGATGACAACATCTGTTTATATC
GTATTAGCATTATCGTGTTGCTGTATTGGTTGTTTCGCATGTGGCTCAGC
CTGTTGTACCGTTTTTCGCGAAGAGTAGGCTCACTATACATTGATCAATG
tccaaaaaaacattacataCCGATTTACTTAATTGTTGTTGGATCATTTT
CCATCTTCCAACAACTTCTCAATATTTGTACACGATTTACAAGACGTAAC
GACAACGATTCTGGTCAACGTCATTTATCGTGCGATTGTTATCGGTGTTG
TCGAAGTGTTATCAATCTTTTTGTATTCATGTGGTTTATTGCTGGAAACG
TATGGATTTATTCAGCATATGAGCCAAATTATACGGACCGGTCAAGTCCC
GATTTTTGCCATAAGACATTGTACTTATTTGCCTTTTGGATGACAACATC
TGTTTATATCGTATTAGCATTATCGTGTTGCTGTATTGGTTGTTTCGCAT
GTGGCTCAGCCTGTTGTACCGTTTTTCGCGAAGAGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000337_pilon | genome | sc0000337_pilon:259196..264984 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 487-894:5382 |
| Aaloc | 427-483:4684 |
| Aaloc | 283-423:4231 |
| Aaloc | 220-279:4003 |
| Aaloc | 148-216:3268 |
| Aaloc | 1-147:1 |
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