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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000337_pilon:217670..220944- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015220 ID=XLOC_015220|Name=XLOC_015220|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3275bp|location=Sequence derived from alignment at sc0000337_pilon:217670..220944- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGGACAAAGATGTTTTTGTCCATATTGATTATTTTGACGTTGCTACC
GTTGAAAAGTCACGAGGTCGATGTTGAGCTCATTGAAAACACTCTCACCA
ACACTCAAGCCATTGTTGACATAATCGAGGAAAGGAACACTGCTTTACAA
AATGCTGGAAAGGCTGTTGGCCCTCTTGTGTCGAAGATCGGAGCTCTTGC
GCCGTTTCTTGGAGCCGCTGGAGCGTTCATTTCAATCCTTCTTGCTTTTT
TACCACAAGATTCTGCCGAAATACAACTGATGAAGACTGAATTTGCAGAG
GTCAATAAAAAATTAGACATCATAACACACAAGTTGGATAATATTGAACG
GTTGATCAAAATTGAAACTCAAAAGGCTGCTTATATTGACTCGGAGAGTA
AAATCAATTTTGGGTTCACTCAATTAGCAAAATTTTATGATGAGCTGATG
GGCGTGGACTGCACAGAAGAGAGTAAGTGCTTGAAAGAAAGAACGAAAAT
TGCTGAAAGGTATGCAACAGAATTTTTTCATTAATTTACTTGAGTGACTC
GACTCTAATATATCCCTGAAAAATGCCCCTGGAATGTGTTTTAAGCAGTT
TCTTGCTGATCTCAACTTAATTTTGATATTTGAATAATATTGTTCCTTAT
GAACGAACAAAGTAGAGCATCGCAAAACCACGGTATTTTCGATCTCGCTG
CTTGATTTGTTTGCATGTTTCTAGGAAATTACTCTAGAATTCAGGTTCTA
TTATAACCTTGATTAGCTTTTCTTCGTCTCATTTTTCTGAAAATTTTTGT
CATTTTTCTCTTTGCTCGTTTAGATACAACAAAGACTTCAAAGCAGTAGT
GCAACCCTTATTTCAAATCCTCCAAAACTCGTATGATCAAAATCAATTTG
CGCAGCCGATTCTCGAGTTGGTCAAAGAAGAGTTTCAATGTGATGTTGGC
GAATTGAATTCGTTTGTGGAAACAATATATCTCTTTGCAAGACAAGGTCA
ACAGGTTGTCGTAACACACCACAAACTTAGCGGCTCAAATACAAGCGTTG
TGACGTCAGTACAACAATGGATCAACATGGTTTACGCCTTAAGAAACAAA
CTTTACGTAGAGAAAAAACATTGTTACGACTTTATTGAAACCTATATGGC
TAATGATATTAATGATTTGCAATACCAAGATGGAACAAATGCATTTACTT
TCAGGAAATTGGACCGACTGATTCGCTCAAAATACGCTTGGTTGGGATGG
GTAAGAATTTTGATTTTTACAATTTTTCAAATTCCCTGTCTCGAGGATTG
AGGTTAGAGGTGTTCATTTAGTTACATGAAGCTTTTGTTGTCACGACCAG
AATCAATTAAATCTCCATATTTTTCAGACTCAATAGGCTACTTTAGTACT
GGAGATGAATATTTCTATAGATATTAAGAAATCAGAGGCTTGTAGATTTC
TCATAGGTCACCTCACATATGAAGAATAAACATACGATAGCAGTTCGAAG
CTATTGAATAAGAAATTTAAAACTTCTATCCCAGCTTTCATTTAACTTCT
ACTAGAGATTGTCCAAATTTTTATGTGTCTTCACATGAAAATTTTCAAAC
TCTTTGATTCGTATCATTCTTAATATTTCGATTTTTGCCTCCCTCCCTCG
AACTGAAATATTTTTTCTTTTAAAACTGTTTTTAGAATTTCCAAATTTAC
AACGGCTTCAGCAACAAAGAAGAAGCCTTCAAAGTCATCCAAGGTTTTTC
AAACGCTCCATCAACTAAAGAGAAACGAAAGCGTGCCATTATTGCAACTC
CTATAGATCCTCTGGCTACATATTCTAAAGAACGAATCAATCTAGTTCGC
AATGCTATTAAGAAAATTGACTACTATGACATCAAAAACAATGATAAAAG
TCATTTCGTTAAGTTGGTAAGAACTTTTCGAAGATATTCTTTTTGTCATG
TAATATAAGAACACAGAGCTGGTCTCGCCGATGAAAAGAATGGTATACTC
TTGACCCCTTTTCTCACAGACCCAGTAGGATGTTTTTATCCAGTGGGGAT
AAAATAGTGGCGGGGATTTGACTTCAAAAAATTCAGTGGGAATGGAAAAA
TAGCACAATATTTTGCAGTAAGGGTTTTTATTTTATTATTTTCAGCGGGC
AAAAATTATAATATAATTTTCCACCGGGGACAATATTTTGTCCAGTTTTT
TTTTGGTGGAAGGAGGTTCTATACCGGATTCGTGGGAATGGGTGTACTTT
TGAGAATGAAATCTGAGACACCCCTGTCTCAGTGTGCCGCTGAAACTTTT
TGGCACAGCTAGACAATGATGTTAACTTTTAGCTTAGTATAGATATAAAC
GTGAAGTATTTCCATGTAAAGAAGAGTCTATTGATGATGACAAAAAATGC
AGTATTGCTTTTTTAGCTTTGTAACCTCAGGATTTATATTTTCTTTCTTT
GCTACATAGGTGGAAGAAATACTCAAGAAAGCTGGAATCTACAAACACGT
TCAATCAATCGTCGCATTGAAGACCAATCTCAAAATTGAAATCGAAGAAG
ATCGTTTCGATTCTTACCTCAACGAAGAATTCACCTTCGATGCACCCAAA
CAACCATCCAATCCTAACAATCAGCCACCGCCACCACCAAAGAAAGTACG
CGTCGTTGTTATGGTCAAACCAGTGGAAGCTGACACTTCATTTTGCGACG
AAGATACTTGCCATGGATCAAGCAAGTGTGTACAGCTACCGTTTACCAAG
TTAACCGAATGCCAATGCGAAATCCACTTCGACGGAGAACGCTGTGAAAC
TTACTCTGAAAACTCACTATCATCAACCTTGGATCTCTTGGTCACAACCT
CTCTAACAATCCCATCTCTTACTGATGTTTATTTCGATATCCAAGACTTG
AAAGAGTCTTTTAGTGACGGAATTGAGAATGTCAATAATGCATTGATAGA
GCTAGGTAGCGTTTTAGAACAATCATTCATTGATCTATCTTTGATGCTTG
GCAATGAATTCAAATGGACAAACCTGAAAGTGACATACTCGGAAACGTTA
TCTGATGTCGAATTCTTTATCAGAGAGTTTGCAACAAGATCCAAAGCTAA
TGGTGACAAACGTGGTAAAGAGCTTGCTGAACACATCCTACAACCTGGGC
ATATCAAAAAATGGTTGAGTGATTTGAATCTACTCTTTATGGGTAATGAT
AATCTCATCCAGGACCATGAACCTTTGCTTGTTGTTTTCATGAGTCGTTA
CTCAAAAGATGCTTGTACAGCTCCT Coding sequence (CDS) from alignment at sc0000337_pilon:217670..220944- >XLOC_015220 ID=XLOC_015220|Name=XLOC_015220|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3966bp|location=Sequence derived from alignment at sc0000337_pilon:217670..220944- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGGACAAAGATGTTTTTGTCCATATTGATTATTTTGACGTTGCTACC
GTTGAAAAGTCACGAGGTCGATGTTGAGCTCATTGAAAACACTCTCACCA
ACACTCAAGCCATTGTTGACATAATCGAGGAAAGGAACACTGCTTTACAA
AATGCTGGAAAGGCTGTTGGCCCTCTTGTGTCGAAGATCGGAGCTCTTGC
GCCGTTTCTTGGAGCCGCTGGAGCGTTCATTTCAATCCTTCTTGCTTTTT
TACCACAAGATTCTGCCGAAATACAACTGATGAAGACTGAATTTGCAGAG
GTCAATAAAAAATTAGACATCATAACACACAAGTTGGATAATATTGAACG
GTTGATCAAAATTGAAACTCAAAAGGCTGCTTATATTGACTCGGAGAGTA
AAATCAATTTTGGGTTCACTCAATTAGCAAAATTTTATGATGAGCTGATG
GGCGTGGACTGCACAGAAGAGAGTAAGTGCTTGAAAGAAAGAACGAAAAT
TGCTGAAAGATGGGGACAAAGATGTTTTTGTCCATATTGATTATTTTGAC
GTTGCTACCGTTGAAAAGTCACGAGGTCGATGTTGAGCTCATTGAAAACA
CTCTCACCAACACTCAAGCCATTGTTGACATAATCGAGGAAAGGAACACT
GCTTTACAAAATGCTGGAAAGGCTGTTGGCCCTCTTGTGTCGAAGATCGG
AGCTCTTGCGCCGTTTCTTGGAGCCGCTGGAGCGTTCATTTCAATCCTTC
TTGCTTTTTTACCACAAGATTCTGCCGAAATACAACTGATGAAGACTGAA
TTTGCAGAGGTCAATAAAAAATTAGACATCATAACACACAAGTTGGATAA
TATTGAACGGTTGATCAAAATTGAAACTCAAAAGGCTGCTTATATTGACT
CGGAGAGTAAAATCAATTTTGGGTTCACTCAATTAGCAAAATTTTATGAT
GAGCTGATGGGCGTGGACTGCACAGAAGAGAGTAAGTGCTTGAAAGAAAG
AACGAAAATTGCTGAAAGATACAACAAAGACTTCAAAGCAGTAGTGCAAC
CCTTATTTCAAATCCTCCAAAACTCGTATGATCAAAATCAATTTGCGCAG
CCGATTCTCGAGTTGGTCAAAGAAGAGTTTCAATGTGATGTTGGCGAATT
GAATTCGTTTGTGGAAACAATATATCTCTTTGCAAGACAAGGTCAACAGG
TTGTCGTAACACACCACAAACTTAGCGGCTCAAATACAAGCGTTGTGACG
TCAGTACAACAATGGATCAACATGGTTTACGCCTTAAGAAACAAACTTTA
CGTAGAGAAAAAACATTGTTACGACTTTATTGAAACCTATATGGCTAATG
ATATTAATGATTTGCAATACCAAGATGGAACAAATGCATTTACTTTCAGG
AAATTGGACCGACTGATTCGCTCAAAATACGCTTGGTTGGGATGGATACA
ACAAAGACTTCAAAGCAGTAGTGCAACCCTTATTTCAAATCCTCCAAAAC
TCGTATGATCAAAATCAATTTGCGCAGCCGATTCTCGAGTTGGTCAAAGA
AGAGTTTCAATGTGATGTTGGCGAATTGAATTCGTTTGTGGAAACAATAT
ATCTCTTTGCAAGACAAGGTCAACAGGTTGTCGTAACACACCACAAACTT
AGCGGCTCAAATACAAGCGTTGTGACGTCAGTACAACAATGGATCAACAT
GGTTTACGCCTTAAGAAACAAACTTTACGTAGAGAAAAAACATTGTTACG
ACTTTATTGAAACCTATATGGCTAATGATATTAATGATTTGCAATACCAA
GATGGAACAAATGCATTTACTTTCAGGAAATTGGACCGACTGATTCGCTC
AAAATACGCTTGGTTGGGATGGAATTTCCAAATTTACAACGGCTTCAGCA
ACAAAGAAGAAGCCTTCAAAGTCATCCAAGGTTTTTCAAACGCTCCATCA
ACTAAAGAGAAACGAAAGCGTGCCATTATTGCAACTCCTATAGATCCTCT
GGCTACATATTCTAAAGAACGAATCAATCTAGTTCGCAATGCTATTAAGA
AAATTGACTACTATGACATCAAAAACAATGATAAAAGTCATTTCGTTAAG
TTGAATTTCCAAATTTACAACGGCTTCAGCAACAAAGAAGAAGCCTTCAA
AGTCATCCAAGGTTTTTCAAACGCTCCATCAACTAAAGAGAAACGAAAGC
GTGCCATTATTGCAACTCCTATAGATCCTCTGGCTACATATTCTAAAGAA
CGAATCAATCTAGTTCGCAATGCTATTAAGAAAATTGACTACTATGACAT
CAAAAACAATGATAAAAGTCATTTCGTTAAGTTGGTGGAAGAAATACTCA
AGAAAGCTGGAATCTACAAACACGTTCAATCAATCGTCGCATTGAAGACC
AATCTCAAAATTGAAATCGAAGAAGATCGTTTCGATTCTTACCTCAACGA
AGAATTCACCTTCGATGCACCCAAACAACCATCCAATCCTAACAATCAGC
CACCGCCACCACCAAAGAAAGTACGCGTCGTTGTTATGGTCAAACCAGTG
GAAGCTGACACTTCATTTTGCGACGAAGATACTTGCCATGGATCAAGCAA
GTGTGTACAGCTACCGTTTACCAAGTTAACCGAATGCCAATGCGAAATCC
ACTTCGACGGAGAACGCTGTGAAACTTACTCTGAAAACTCACTATCATCA
ACCTTGGATCTCTTGGTCACAACCTCTCTAACAATCCCATCTCTTACTGA
TGTTTATTTCGATATCCAAGACTTGAAAGAGTCTTTTAGTGACGGAATTG
AGAATGTCAATAATGCATTGATAGAGCTAGGTAGCGTTTTAGAACAATCA
TTCATTGATCTATCTTTGATGCTTGGCAATGAATTCAAATGGACAAACCT
GAAAGTGACATACTCGGAAACGTTATCTGATGTCGAATTCTTTATCAGAG
AGTTTGCAACAAGATCCAAAGCTAATGGTGACAAACGTGGTAAAGAGCTT
GCTGAACACATCCTACAACCTGGGCATATCAAAAAATGGTTGAGTGATTT
GAATCTACTCTTTATGGGTAATGATAATCTCATCCAGGACCATGAACCTT
TGCTTGTTGTTTTCATGAGTCGTTACTCAAAAGATGCTTGTACAGCTCCT
GTGGAAGAAATACTCAAGAAAGCTGGAATCTACAAACACGTTCAATCAAT
CGTCGCATTGAAGACCAATCTCAAAATTGAAATCGAAGAAGATCGTTTCG
ATTCTTACCTCAACGAAGAATTCACCTTCGATGCACCCAAACAACCATCC
AATCCTAACAATCAGCCACCGCCACCACCAAAGAAAGTACGCGTCGTTGT
TATGGTCAAACCAGTGGAAGCTGACACTTCATTTTGCGACGAAGATACTT
GCCATGGATCAAGCAAGTGTGTACAGCTACCGTTTACCAAGTTAACCGAA
TGCCAATGCGAAATCCACTTCGACGGAGAACGCTGTGAAACTTACTCTGA
AAACTCACTATCATCAACCTTGGATCTCTTGGTCACAACCTCTCTAACAA
TCCCATCTCTTACTGATGTTTATTTCGATATCCAAGACTTGAAAGAGTCT
TTTAGTGACGGAATTGAGAATGTCAATAATGCATTGATAGAGCTAGGTAG
CGTTTTAGAACAATCATTCATTGATCTATCTTTGATGCTTGGCAATGAAT
TCAAATGGACAAACCTGAAAGTGACATACTCGGAAACGTTATCTGATGTC
GAATTCTTTATCAGAGAGTTTGCAACAAGATCCAAAGCTAATGGTGACAA
ACGTGGTAAAGAGCTTGCTGAACACATCCTACAACCTGGGCATATCAAAA
AATGGTTGAGTGATTTGAATCTACTCTTTATGGGTAATGATAATCTCATC
CAGGACCATGAACCTTTGCTTGTTGTTTTCATGAGTCGTTACTCAAAAGA
TGCTTGTACAGCTCCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000337_pilon | genome | sc0000337_pilon:217670..220944 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1168-1983:817 |
| Aaloc | 937-1167:1591 |
| Aaloc | 511-936:2452 |
| Aaloc | 1-507:3276 |
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