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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000383_pilon:153682..158751+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015189 ID=XLOC_015189|Name=XLOC_015189|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5070bp|location=Sequence derived from alignment at sc0000383_pilon:153682..158751+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATCTAAGTTTGGTGAACCAGAATGGTATTCAAACCCTTTAGTCTGT
AAATTAACTGATTTTGGAGAAAGTCGTTCAACAGTTGTCCATACCAGAGC
AATGCTTATGAATGAAACGGTCCGAAAATCGACCGTCAATGATTTTAATC
GTGGAACATTTTTCTACAACGCACCTGAAATTACAGTACCAAGCAAAAGA
CCACAAGCCTTCACACAAGCGATGCTTGAAAAAGCTGACGTTTGGTCGTT
TGGTATGGTTATTTTTTCAGTCTTGAATGCGGATTATGGTGGTATTCCAT
ATcaagaaaacatcaaaaacgCCTTAAAAGACAGACCAGAAATGATCGTT
AAAGAACAAGTAATCGAATTAATGAGAAATGAGATTCCGCCAACATGGAG
CAAGAAGTATGCACACCTACACAATGCTCAATGGAGAGATCtggtgaaaa
ttcaaaaaagttgcgCTGTTCATTTTGGAGAACGCCCAACTATGGTGGAA
GTTTTGCATAGTCTCGGAAAACAGGTAACAGGTCGAATTGTAGCTCAGTA
AGCGCCCAGCGACATTGTATACTTGCGTTTGATAATTTAGTActataaat
tttagaaaattacaatccacaaaattttcgaaaattaaccTTTTATACTT
TTATGCTAGAAACATTTTAGTGCGTAGTATGTAGTTTCTTGATTTCTCCG
AAATAGAGGTTTTactcaatgaagtataagcccatagaagcgaatcttta
acctttctcaggcaagaaaaagtgaagccttagaaTATACGCCGTacttt
tgatgacggattgaatttagtggtttctttcttttcgagtggcatttttt
taaatctagctgaaaattatacttttaatatccggaatttgtataaaaac
cacacGAGCCGCTCAAAGCTGCGTAACTTTGGCGGGTAAGATTTAGGGGC
TTCAAATCCTACTAAGGAGATTAGCTTCCAGCCCTTCAGAATTATATTTC
ATTGGTTTTATTTGcatgttatttaaaaaacttatTAATTATAATTTCAG
GAGCCAGAAAGTGATTGTTGGGCTTGTTTCAAGAATTCATCTTTAAATGA
AATTGTTAGGTGAGATGCCAATGAGATAATTAATGTggtataaatttaaa
aattgatattcaAGGTTTGGGATGAAAATCAAATTGGAGGTAAATAAGTA
ACGGATAAATGGATCTAGAAAGCGCTGAAAGTGTTAAACTTGCGATAGAA
AACGGCTTTTTCTATGAGCTATTTTGACCGTGAAACAAAAGAGAGGTTTC
AATCGAAAATTCTATTTCATTAACAGTTATTTAAGTCATCTAGGATGAAT
ATTCGAATCCACAGCGTGAACAATTTCACAATCGGTATGAAAATTAATTA
TAATATGGACACTGTCAACTAGTTGTGAAAAAGTTAACTGAAAAAGTTCa
ttcaaatttctattttagaaaaattgagaTCATCAGTCTTCCGATAAGTC
AAAACTCGGCGATGGAACACTATAATGAAGAGCAGGCACTTGCGTTCGAA
AATACTGGGCTTCTCAGTGACCAACCACTAGAAAACGATGGTAGTAATGG
TTGTACTTATCTTTGCCTGAAGATTGTTCAAAATTTGCTAAAAGAAGAAT
ACACAGGAGAAAAATTGGAAGGTAATCGAAGTATATTTGTTAGCGCTATC
AAGGTCGTGTTTTTTGAGGAATTGTAATCCgggttaattaaaaaaaaaac
attcagaTTGGATAActtttttatgaattatttAGAAAGATATGtaatga
aaaaaagttaaaggtcAAAAGGTTAGGTCAAGTTAAAAGGCCTAAGGTAA
CTGAAGTATTCTATTTATTCAATTTAGAAATGGTAGCAAAGGTTATATGG
ACCTATCCAGCTATTCTAAACAATTTTCGAAGCTTTTCCAGCATGTCTCC
GATGGATGCATACAAAGTTATGGTAGCTAATGATAAGAACTTCATTAAGA
TGAATTTCGAATATGTGGTTGGAAGTTATCGCGCTCTTACAGATTCGGGA
AAGGCAGATCTACATGAAAAacttaactcactaaaagaagATTTTGTATC
TGTTTTTGTTTGCCTTCCTTACACAGTTGTGATATTTCGCTCAAAAGGAA
AGCTACATCTTATTGACACACACTCAATTCCTGAAAAGTCGGGGGGAACT
GGTACCGGGGTCATTGTATCGTCGGAGACAGCACAAGATCTTTGTAATTG
GTTACATCTCCGTTTGGAAAACACAGAAATGGAAGTCAATACTCCACAAT
CATTAATTCTTCTAAAAGAAAAGTAAGGCTTCAGCTCggtaaactttttc
aatttacaCCATAGAGACCACAATGAAcagacatttttttatttttgaaa
aagactaAGAAGACTGGAAAAACAAAACCCTGTAAATTCTTCCCTGGCTA
CCCCatactttaaaatatttaaccATCTTTAATACACACTTCACTTTAGC
ACCGATGACATCCATTTCGATCTCAATATGGTGGATGACGATCAACCTGT
TATCAAAATTAGAGAACCAACGgtaagttttaaaattattattttaatag
aATACTGGGTTTACTAATGCAGTGAAAAGATAATTAgtaactttcgtttt
caaacaaaGTTAAGATTTAGCGATCCCCCACCTCATCTGCTCGACTCTTA
GAACATCGACAGAGTTCGTAAACCTTTGTACACCTCTTTCGTGGCATGGT
TTAGTCGCAGGAGAAGGTATATTATCTATCAAGTGAATCGGTCATGATGC
GGGAGTTGGGTCAGACCTTGACACCTTAAACGTTAGTTAACATTGTACCC
GTCACAGTACGCAACATTTTTGCCCTTAGGATTTATAGTACGTATTTTAT
TAATTTAGGGAAATTTGTCTAAAGCAGCAGAGCCAGCTTCTTCGAAATCA
AACGAAGCACATAAAACAAGAAACCCGTCTAGAGTGGAAAAGAACTTTGT
AagaattcaatttaatttaattgcaGCGATCGCAGTACTATGAAAAATAA
CCAAAGtcctataaaataaaattgaaacgtAAACTAATTTCATTTACAGC
TTTGCGAGTAAGAGACTGATCAATTTTCAAACCTCGAATTTACTTAATTA
CTTACTTTAGGTAAATCTGACTGAAGATCCGGATTCCTCGAATTCAAGCA
AAGCAGAGAAGACTAAAAATTCTTCTAGTGATAGATCACCCTTGGTAAGA
TTGTCATTGGATTTGAAATGTAACCGATTCACAATTTGTTTTCGTGAACt
caataaaacatttaaaattgaaTCATACAAAAGCTTTTTTAGAACAATCT
TTACGAAACACGATTTTCTAACGGAGTTTGTGTAATATCCAGGATCTGTT
CGGAGATAAAGGTTAAACCCATTCAAGCCCATTCAATAAAGTGAAAATGA
ATCAAGAGTTGATAAAACAATAGTTTACATTCAAATGCTTTTTGTTGGTT
TTAGGTAAATACGTTTAAAGAATCTGAGTCAACTTCTTCAAAACCGAACG
AGACAGAAAAACAAGGAGAATTCTCAGGAAAAAAGCCgtcaagaaaaaaa
agaccCTCTGTAAGATAATAACATTGCCAACAAATAATGACCAGGATTTT
CAATTTAATCTCTCATATTGAAACCTCCAATAAATGATCCTGTGTAAAAT
AATTTAACCAAGACATTACTGAGCATCACCATTTGacctattttttaaat
atagtcTGTGAGGAGACCCTGTAAGAATGTTATCGCGCATGTCTCGATTT
AACTATCTAAAAATTAACGAACAGAGAGCATGCATCCATCTTTCTATTAA
GGTGAAACAGATTataaccggggggggggtacaagggttggcggatgagg
ggcATGTGCgaacgggacctccgaaaaccaacccttagagaaactttttt
gaaaaattttcttcgatctTTGAAAAAGTGGTATACTTGCGATATCATTG
tactattttctttaaaaagaaattctGTTATATAACACTCAAGTGGGCaa
gagtactcttaggttccaaataaacggggTggggggttgaaaaattttct
agatttcaataaacggggggggggcctaattgccgggggggttggaaatt
gtacttctgaaacccaaaaataatgtaaaaataggctaaaatcaggctat
ttagagcaaaataaggggtcttctctttgacagctgaaaatattcttaga
gattaataaacgggggggtcctaataaggtccggggggttggaaaatttt
cgaaaaattaacaagcgggggggccgtttatttggaacctaagagtagtt
accaaaattttaatttactaATCTACTtcattaatttcaaatttaagaaa
GACCTTTCTGATATCTTTTGATGATGACACTTTTTCTGTGTTTATGAGTT
GTAATTTGACAATTTGACCCTCATCAATTGACAACATATACGCTTTGTGT
TACACGTCATACCATACTATGAGACGATGCCTTATAGATATTAACAAAAT
CGAGGACACTCGCTTACCACCAAAGTAGCCTTCATTTAGTGAATCAAGTC
GCAAGTGGGGTCAAATAAACCCTAACACCTTATAAGATAACACTGTACCC
CGCAAGGTACTAAACCGCTCAAAACATTTACACTTAAGTTTTACAGTACg
tgtttttttattaaatttagaaaaatctatCCAAAACAGCTGGACCAAGC
TCTTCCAAATCAAAGAAACCAAGACACCCGTCTAGTGATAGGACAAACTT
TGTAAGatttcaattaaatttaattGCAGTACCAAACAACAAAGTCTTTG
CTGAACTAAACCTGTACAATCAGCGCAATAAAATAAAGTATAATCAATGT
AGTCAAATTAAATCTTATTTACGATTTTTAACAACTTTGCCAGCAAGAGA
CTGATCAATTTTCAAATCTCGAAGTTACTTAATTACTTACTTTAGGTAAA
TCTGACTGAAGATCCAATTTCCTCGAATTCAAGCAAAGCAGAGAAGACTA
AAAATTCGTCTAGTGATAGA Coding sequence (CDS) from alignment at sc0000383_pilon:153682..158751+ >XLOC_015189 ID=XLOC_015189|Name=XLOC_015189|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2994bp|location=Sequence derived from alignment at sc0000383_pilon:153682..158751+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATCTAAGTTTGGTGAACCAGAATGATGAATCTAAGTTTGGTGAACC
AGAATGTCTTGAATGCGGATTATGGTGGTATTCCATATcaagaaaacatc
aaaaacgCCTTAAAAGACAGACCAGAAATGATCGTTAAAGAACAAGTAAT
CGAATTAATGAGAAATGAGATTCCGCCAACATGGAGCAAGAAGTATGCAC
ACCTACACAATGCTCAATGGAGAGATCtggtgaaaattcaaaaaagttgc
gCTGTTCATTTTGGAGAACGCCCAACTATGGTGGAAGTTTTGCATAGTCT
CGGAAAACAGTCTTGAATGCGGATTATGGTGGTATTCCATATcaagaaaa
catcaaaaacgCCTTAAAAGACAGACCAGAAATGATCGTTAAAGAACAAG
TAATCGAATTAATGAGAAATGAGATTCCGCCAACATGGAGCAAGAAGTAT
GCACACCTACACAATGCTCAATGGAGAGATCtggtgaaaattcaaaaaag
ttgcgCTGTTCATTTTGGAGAACGCCCAACTATGGTGGAAGTTTTGCATA
GTCTCGGAAAACAGGAGCCAGAAAGTGATTGTTGGGCTTGTTTCAAGAAT
TCATCTTTAAATGAAATTGTTAGGAGCCAGAAAGTGATTGTTGGGCTTGT
TTCAAGAATTCATCTTTAAATGAAATTGTTAGaaaaattgagaTCATCAG
TCTTCCGATAAGTCAAAACTCGGCGATGGAACACTATAATGAAGAGCAGG
CACTTGCGTTCGAAAATACTGGGCTTCTCAGTGACCAACCACTAGAAAAC
GATGGTAGTAATGGTTGTACTTATCTTTGCCTGAAGATTGTTCAAAATTT
GCTAAAAGAAGAATACACAGGAGAAAAATTGGAAGaaaaattgagaTCAT
CAGTCTTCCGATAAGTCAAAACTCGGCGATGGAACACTATAATGAAGAGC
AGGCACTTGCGTTCGAAAATACTGGGCTTCTCAGTGACCAACCACTAGAA
AACGATGGTAGTAATGGTTGTACTTATCTTTGCCTGAAGATTGTTCAAAA
TTTGCTAAAAGAAGAATACACAGGAGAAAAATTGGAAGAAATGGTAGCAA
AGGTTATATGGACCTATCCAGCTATTCTAAACAATTTTCGAAGCTTTTCC
AGCATGTCTCCGATGGATGCATACAAAGTTATGGTAGCTAATGATAAGAA
CTTCATTAAGATGAATTTCGAATATGTGGTTGGAAGTTATCGCGCTCTTA
CAGATTCGGGAAAGGCAGATCTACATGAAAAacttaactcactaaaagaa
gATTTTGTATCTGTTTTTGTTTGCCTTCCTTACACAGTTGTGATATTTCG
CTCAAAAGGAAAGCTACATCTTATTGACACACACTCAATTCCTGAAAAGT
CGGGGGGAACTGGTACCGGGGTCATTGTATCGTCGGAGACAGCACAAGAT
CTTTGTAATTGGTTACATCTCCGTTTGGAAAACACAGAAATGGAAGTCAA
TACTCCACAATCATTAATTCTTCTAAAAGAAAAAAATGGTAGCAAAGGTT
ATATGGACCTATCCAGCTATTCTAAACAATTTTCGAAGCTTTTCCAGCAT
GTCTCCGATGGATGCATACAAAGTTATGGTAGCTAATGATAAGAACTTCA
TTAAGATGAATTTCGAATATGTGGTTGGAAGTTATCGCGCTCTTACAGAT
TCGGGAAAGGCAGATCTACATGAAAAacttaactcactaaaagaagATTT
TGTATCTGTTTTTGTTTGCCTTCCTTACACAGTTGTGATATTTCGCTCAA
AAGGAAAGCTACATCTTATTGACACACACTCAATTCCTGAAAAGTCGGGG
GGAACTGGTACCGGGGTCATTGTATCGTCGGAGACAGCACAAGATCTTTG
TAATTGGTTACATCTCCGTTTGGAAAACACAGAAATGGAAGTCAATACTC
CACAATCATTAATTCTTCTAAAAGAAAACACCGATGACATCCATTTCGAT
CTCAATATGGTGGATGACGATCAACCTGTTATCAAAATTAGAGAACCAAC
GCACCGATGACATCCATTTCGATCTCAATATGGTGGATGACGATCAACCT
GTTATCAAAATTAGAGAACCAACGGGAAATTTGTCTAAAGCAGCAGAGCC
AGCTTCTTCGAAATCAAACGAAGCACATAAAACAAGAAACCCGTCTAGAG
TGGAAAAGAACTTTGGAAATTTGTCTAAAGCAGCAGAGCCAGCTTCTTCG
AAATCAAACGAAGCACATAAAACAAGAAACCCGTCTAGAGTGGAAAAGAA
CTTTGTAAATCTGACTGAAGATCCGGATTCCTCGAATTCAAGCAAAGCAG
AGAAGACTAAAAATTCTTCTAGTGATAGATCACCCTTGGTAAATCTGACT
GAAGATCCGGATTCCTCGAATTCAAGCAAAGCAGAGAAGACTAAAAATTC
TTCTAGTGATAGATCACCCTTGGTAAATACGTTTAAAGAATCTGAGTCAA
CTTCTTCAAAACCGAACGAGACAGAAAAACAAGGAGAATTCTCAGGAAAA
AAGCCgtcaagaaaaaaaagaccCTCTGTAAATACGTTTAAAGAATCTGA
GTCAACTTCTTCAAAACCGAACGAGACAGAAAAACAAGGAGAATTCTCAG
GAAAAAAGCCgtcaagaaaaaaaagaccCTCTaaaaatctatCCAAAACA
GCTGGACCAAGCTCTTCCAAATCAAAGAAACCAAGACACCCGTCTAGTGA
TAGGACAAACTTTaaaaatctatCCAAAACAGCTGGACCAAGCTCTTCCA
AATCAAAGAAACCAAGACACCCGTCTAGTGATAGGACAAACTTTGTAAAT
CTGACTGAAGATCCAATTTCCTCGAATTCAAGCAAAGCAGAGAAGACTAA
AAATTCGTCTAGTGATAGAGTAAATCTGACTGAAGATCCAATTTCCTCGA
ATTCAAGCAAAGCAGAGAAGACTAAAAATTCGTCTAGTGATAGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000383_pilon | genome | sc0000383_pilon:153682..158751 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1423-1497:4996 |
| Aaloc | 1342-1422:4721 |
| Aaloc | 1237-1341:3505 |
| Aaloc | 1153-1236:3161 |
| Aaloc | 1063-1152:2909 |
| Aaloc | 991-1062:2501 |
| Aaloc | 547-987:1880 |
| Aaloc | 343-543:1470 |
| Aaloc | 283-339:1051 |
| Aaloc | 31-282:273 |
| Aaloc | 1-27:1 |
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