|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000412_pilon:184347..187235+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015046 ID=XLOC_015046|Name=XLOC_015046|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2889bp|location=Sequence derived from alignment at sc0000412_pilon:184347..187235+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTTCAGACTACAGACCAAAAGGTTGCTGGCTCTATGTCAAATTGAC
CACATCAATCATTGGTGTTGTTCTTGGTTTAGCTGCATTTTTCTGCTTTA
TGTTTGTGTACCATAATGTTCACTCTGGGGCCTGGGCATTAGTTTCGGCA
ATGTTTGCGCTGATCACGTTTGTCATGCATGTTTGCGTGTACCGTGATGT
CACGTATTCTATTCAACCTCATACTTTCCAGAGATTGAAATATGTTGGTA
TTTTTGGTGCTTTCCTTGGTTTAGGTATTTTTATTGGATATTTGGTCAAA
GGCATATTGGTACACGAGTCAGGTATTTGTTTTGTACTTTTTACTCTAAT
TAATTACTACCACTATAACCCTTATACAACATGGACTATAAAGCTATGTc
cttttattcatgatatgcaccactgggagagtcttccaagaattttcaaa
gaaaattccacccaatacgtcactttttctagtGTGTAAGTAGGGGGTGG
GgacataatagaccttttttcgaTTTACTACCAGGACAAGTtgatttaga
acattttttgggTGCTGATTCCGAAAATCATActcattttggctgaaaat
caatattcagCCTGCTACCCCTATGCACCAAGTTGGCTAGAATACTtaaa
aatgggcatttttgtGTGGTGCTTGCATCTGCTGTTCTGAGTCTGTCTTT
GGAttatatttgagtttttttggtcAAATGGCATCCATAAAGGTCATTGA
TGATGCCATTAGTCTCAGATGAAATTTGGGGCCTGGTACTGGTACGCACC
GGGTtagccaaaataccaaaatttgataaaattgaaatacAGCATATTCT
ACGCCTTCTGCTCAATTTGGAACTTTTTATTGAGGTTGCCATGTAGAAAT
CTATTCCAAAACATTGTTCCTGTAAGATTTTATCCTAATGGGCCTTTCAG
AATTATGCACCGGGTTGCCAACAGCACTAAAATCGAATTGTGATTTTAGG
GTTTTAAGTAAAGCGAATACTAAATGTTATTTGAACTcaattgtcaaaat
tttgatacgTTTTTCACTAAATGTGACATTTGGAACTGGCCAATTTCAAA
CCAAGTTGGCTTTTGtaataaaataagaataagCAAGTATCTATAGAAAT
GTCACCATAACAACTTCGAGGCTTATTTTATGCATATTTGCCCATAGAAA
TCCCTGAATGCCTCAAATGAGTTTGACCAGTTCTTGCGATTACGAGCATA
TGAATgtctgaaaatatttaatattttaaattggaaggaaaagtttcttt
aaaaagattctttttcgaATGATAAATTTTGGATTATTTGCTGaaaaaaa
GTCTTTCTGTGAGTTTTGTGACTAACTTGGTCTGGATAATCCACTGAATT
CGTTCAAAATGAAGACTTACTTATGActttaatatatattttatctaaac
tttcttgtaaatttttaatcagaAATTTATAGgcaaaaagaagcaaactt
ACTAAACTATGCAACGTGGTTCAAGCCACATGACTTGATTCTAGTATAAG
GGCTAACCTGGTTCGAAATTGGCCAGTTCAAAGTGCCACATTTAGTGACA
AACtgatcaaaattttgacaactAAGGCTTCAAATAACATTTATTATTCG
CTTCACTTAAAGCCCTAAAATCAcaatttaacctaaaaattttcCGGTTT
TAGTGCTGCTGACAACCTGGTGCATAATTCTGAAAGGCCCATAAGGATAA
AATCTTATATTACAGGAACAATGTTTTGGAATAGATTTCTACATGGCAAC
CTCAATAAAAAAGTTCCAAATTGAGCAGAAGGCGTAGAATATGCTGTAGg
tcaattttaacaaattttggtATTCTGGCTAACCCAGTGCGTACCAGTAC
CAGACCGCAAATTTCATCTGAGACTAATGATATCATCAATGACCATTATG
GATGCCATTTGACCTAAAAAACTCAAATATAATCCAAAGACATACTCAGA
ACAGCAGATGCAAGCACCACacaaaaatgcccatttttaAGCATTCTGGC
CAACTTGGTGCATAGGGGTAGCAGGctgaatattgattttcagccaaaat
gagTATGATTTTCGGAATCAGCAcccaaaaaatgtccaaaatcaaCTTGT
CCTGGCAAAAGTGTTGATTATGTCCCCCCTAGTGTAAGTGACGTATTAGG
TGGAAAAtcttaaaagttctcagaagactctccagtggtgcatatcatga
attgagtTTATTTTACTGTACTGTGGTACctgcaaagaagccattgcaga
gTAAAATCTTTGCCTTACGTCGGTCCAACGGTGCTTATCAAAAATAATAG
CGCTCATATAcacattgagtagtgctaccattagagTACCACTTTCATTA
GAAGTTTTGGTTGGCCAGGATTAGGAAACTGCTTCAAGTGTCTATATAAA
GCTCAAAGATTGCTGCATACTTTGAAGAGGAAAagattttcaagggaaat
taAATTCCtctttgaacattttttacCACAATATTCTTGActtttttgag
gaaaataaTTCATAGGATTATCATAGAATTTAGAATTTCTAACATTTTCC
TGCCTTTCTTTTCCAGCCagcaaataaaaatgtttaaaattaaatGGTAT
TGTTTTTCGTGGGAAACATTTGCATTTTTAGTTTAcattaaaatcaaata
ataTCTTTAGCTAggagttttaatattttcaattgCTTTTTTACAGGAGT
TGTTGTAAACGGCTGGTTCATTGTCACTGTGTGGGGTTACATGACATGGA
AATGGGGCTTCTTATTGTTTTGGCACTCGAGGAAGTATTGTCGTTCTTTG
GTTGACGAGATGACTGACATTCTTTCAGTAAATACTTGA Coding sequence (CDS) from alignment at sc0000412_pilon:184347..187235+ >XLOC_015046 ID=XLOC_015046|Name=XLOC_015046|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=930bp|location=Sequence derived from alignment at sc0000412_pilon:184347..187235+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTTCAGACTACAGACCAAAAGGTTGCTGGCTCTATGTCAAATTGAC
CACATCAATCATTGGTGTTGTTCTTGGTTTAGCTGCATTTTTCTGCTTTA
TGTTTGTGTACCATAATGTTCACTCTGGGGCCTGGGCATTAGTTTCGGCA
ATGTTTGCGCTGATCACGTTTGTCATGCATGTTTGCGTGTACCGTGATGT
CACGTATTCTATTCAACCTCATACTTTCCAGAGATTGAAATATGTTGGTA
TTTTTGGTGCTTTCCTTGGTTTAGGTATTTTTATTGGATATTTGGTCAAA
GGCATATTGGTACACGAGTCAGATGTCTTCAGACTACAGACCAAAAGGTT
GCTGGCTCTATGTCAAATTGACCACATCAATCATTGGTGTTGTTCTTGGT
TTAGCTGCATTTTTCTGCTTTATGTTTGTGTACCATAATGTTCACTCTGG
GGCCTGGGCATTAGTTTCGGCAATGTTTGCGCTGATCACGTTTGTCATGC
ATGTTTGCGTGTACCGTGATGTCACGTATTCTATTCAACCTCATACTTTC
CAGAGATTGAAATATGTTGGTATTTTTGGTGCTTTCCTTGGTTTAGGTAT
TTTTATTGGATATTTGGTCAAAGGCATATTGGTACACGAGTCAGGAGTTG
TTGTAAACGGCTGGTTCATTGTCACTGTGTGGGGTTACATGACATGGAAA
TGGGGCTTCTTATTGTTTTGGCACTCGAGGAAGTATTGTCGTTCTTTGGT
TGACGAGATGACTGACATTCTTTCAGTAAATACTTGAGAGTTGTTGTAAA
CGGCTGGTTCATTGTCACTGTGTGGGGTTACATGACATGGAAATGGGGCT
TCTTATTGTTTTGGCACTCGAGGAAGTATTGTCGTTCTTTGGTTGACGAG
ATGACTGACATTCTTTCAGTAAATACTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000412_pilon | genome | sc0000412_pilon:184347..187235 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 325-465:2749 |
| Aaloc | 1-321:1 |
|
